RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 TOPBP1Q92547 1522 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 TECTAO75443 2155 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 IGKV1D-42A0A075B6H8 117 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 FUOMA2VDF0 154 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 PSMD12O00232 456 aaPredicted RBP0.55□□□□□ -2.32
CCDC38-204ENST00000546816 FAAHO00519 579 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 OR5F1O95221 314 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 PSME3P61289 254 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 IMPG1Q17R60 797 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 ACOT6Q3I5F7 207 aaPredicted RBP0.55□□□□□ -2.32
CCDC38-204ENST00000546816 CCDC122Q5T0U0 273 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 OTUD6BQ8N6M0 293 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 WFDC11Q8NEX6 87 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 OR4D11Q8NGI4 311 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 OR4C6Q8NH72 309 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 PPP1R2P1Q96PQ5 205 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 TSPAN32Q96QS1 320 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 PARD6GQ9BYG4 376 aaPredicted RBP0.55□□□□□ -2.32
CCDC38-204ENST00000546816 PRTFDC1Q9NRG1 225 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 MRPL27Q9P0M9 148 aaKnown RBP0.55□□□□□ -2.32
CCDC38-204ENST00000546816 NOSIPQ9Y314 301 aaKnown RBP0.55□□□□□ -2.32
CCDC38-204ENST00000546816 C22orf24Q9Y442 160 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 SNURFQ9Y675 71 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 NUP155O75694 1391 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 MTUS2Q5JR59 1369 aa0.55□□□□□ -2.32
CCDC38-204ENST00000546816 WRNQ14191 1432 aaPredicted RBP eCLIP0.55□□□□□ -2.32
CCDC38-204ENST00000546816 CACNA1BQ00975 2339 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 TRAV14DV4A0A0A6YYC5 116 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 C19orf84I3L1E1 186 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 M0R036 132 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 GEMIN2O14893 280 aaKnown RBP0.54□□□□□ -2.32
CCDC38-204ENST00000546816 CHP2O43745 196 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 AHSA1O95433 338 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 IFNA16P05015 189 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 CRYGAP11844 174 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 CD79AP11912 226 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 COX6A1P12074 109 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 FKBP2P26885 142 aaKnown RBP0.54□□□□□ -2.32
CCDC38-204ENST00000546816 RPL5P46777 297 aaKnown RBP0.54□□□□□ -2.32
CCDC38-204ENST00000546816 SULT1A1P50225 295 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 RPS20P60866 119 aaKnown RBP0.54□□□□□ -2.32
CCDC38-204ENST00000546816 PDE6HQ13956 83 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 MIR17HGQ75NE6 70 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 BPIFA4PQ86YQ2 179 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 FAM19A2Q8N3H0 131 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 H1FXQ92522 213 aaKnown RBP0.54□□□□□ -2.32
CCDC38-204ENST00000546816 TOMM6Q96B49 74 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 C20orf27Q9GZN8 174 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 COMMD5Q9GZQ3 224 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 C11orf68Q9H3H3 251 aaKnown RBP0.54□□□□□ -2.32
CCDC38-204ENST00000546816 PKIGQ9Y2B9 76 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 RIC1Q4ADV7 1423 aa0.54□□□□□ -2.32
CCDC38-204ENST00000546816 HEATR5BQ9P2D3 2071 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 LOC110117498A0A087WWA1 95 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 A0A0D9SG52 128 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 EXOC1LA0A1B0GW35 172 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 DPRXA6NFQ7 191 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 BUB1B-PAK6H3BSN5 160 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 OR2T1O43869 369 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 FADS1O60427 444 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 NIPSNAP2O75323 286 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 TNNC2P02585 160 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 SERPINA6P08185 405 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 ASAH2BP0C7U1 165 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 MIFP14174 115 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 CDK10Q15131 360 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 KCNJ8Q15842 424 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 CLVS1Q8IUQ0 354 aaPredicted RBP0.53□□□□□ -2.32
CCDC38-204ENST00000546816 ARL5BQ96KC2 179 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 SLC50A1Q9BRV3 221 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 MIXL1Q9H2W2 232 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 VPS29Q9UBQ0 182 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 TMEM56-RWDD3S4R434 201 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 HEATR5AQ86XA9 2040 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 ADCY9O60503 1353 aa0.53□□□□□ -2.32
CCDC38-204ENST00000546816 POLEQ07864 2286 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 A0A087WX48 190 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 TRAV26-2A0A0B4J265 109 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 PQLC2LA1A4F0 135 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 C2orf70A6NJV1 201 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 CLDN24A6NM45 220 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 GOLGA6L19H0YKK7 550 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 IFNA10P01566 189 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 TTRP02766 147 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 SPI1P17947 270 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 CDC42P60953 191 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 SPANXN5Q5MJ07 72 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 PTRHD1Q6GMV3 140 aaKnown RBP0.52□□□□□ -2.33
CCDC38-204ENST00000546816 LPCAT3Q6P1A2 487 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 LINC00471Q8N535 108 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 LINC00311Q8N616 119 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 ANKRD29Q8N6D5 301 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 CLDN22Q8N7P3 220 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 OR4E2Q8NGC2 313 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 OR5A1Q8NGJ0 315 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 NEO1Q92859 1461 aa0.52□□□□□ -2.33
CCDC38-204ENST00000546816 TRAV9-1A0A075B6T8 112 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 OR4C46A6NHA9 309 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 KPNA3O00505 521 aaPredicted RBP0.51□□□□□ -2.33
CCDC38-204ENST00000546816 OR1I1O60431 355 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms