RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 HTR2BP41595 481 aa12.91□□□□□ -0.34
CCDC38-203ENST00000546803 KLF5Q13887 457 aaPredicted RBP12.91□□□□□ -0.34
CCDC38-203ENST00000546803 BSXQ3C1V8 233 aa12.91□□□□□ -0.34
CCDC38-203ENST00000546803 C9orf66Q5T8R8 295 aa12.91□□□□□ -0.34
CCDC38-203ENST00000546803 CLEC19AQ6UXS0 136 aa12.91□□□□□ -0.34
CCDC38-203ENST00000546803 NRARPQ7Z6K4 114 aa12.91□□□□□ -0.34
CCDC38-203ENST00000546803 ZNF431Q8TF32 576 aaPredicted RBP12.91□□□□□ -0.34
CCDC38-203ENST00000546803 SCARB1Q8WTV0 552 aa12.91□□□□□ -0.34
CCDC38-203ENST00000546803 MISP3Q96FF7 219 aa12.91□□□□□ -0.34
CCDC38-203ENST00000546803 SEC14L6B5MCN3 397 aa12.9□□□□□ -0.34
CCDC38-203ENST00000546803 IGHV3-23P01764 117 aa12.9□□□□□ -0.34
CCDC38-203ENST00000546803 IL5P05113 134 aa12.9□□□□□ -0.34
CCDC38-203ENST00000546803 INSL3P51460 131 aa12.9□□□□□ -0.34
CCDC38-203ENST00000546803 KPRPQ5T749 579 aaPredicted RBP12.9□□□□□ -0.34
CCDC38-203ENST00000546803 NOXA1Q86UR1 476 aa12.9□□□□□ -0.34
CCDC38-203ENST00000546803 OR52B4Q8NGK2 314 aa12.9□□□□□ -0.34
CCDC38-203ENST00000546803 GAR1Q9NY12 217 aaKnown RBP12.9□□□□□ -0.34
CCDC38-203ENST00000546803 C21orf62Q9NYP8 219 aa12.9□□□□□ -0.34
CCDC38-203ENST00000546803 S4R3C0 116 aa12.9□□□□□ -0.34
CCDC38-203ENST00000546803 TRRAPQ9Y4A5 3859 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 MGAM2Q2M2H8 2515 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 I3L2K1 104 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 WIPF1O43516 503 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 MED6O75586 246 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 ADAP1O75689 374 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 NXPH3O95157 252 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 CLEC3BP05452 202 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 ARL3P36405 182 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 BEAN1Q3B7T3 259 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 PLET1Q6UQ28 207 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 C1QL4Q86Z23 238 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 DTD1Q8TEA8 209 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 ELOVL1Q9BW60 279 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 RBKSQ9H477 322 aa12.89□□□□□ -0.35
CCDC38-203ENST00000546803 PPP5D1E7EU14 171 aa12.88□□□□□ -0.35
CCDC38-203ENST00000546803 MT-CO2P00403 227 aa12.88□□□□□ -0.35
CCDC38-203ENST00000546803 FCGR2BP31994 310 aaPredicted RBP12.88□□□□□ -0.35
CCDC38-203ENST00000546803 GPR183P32249 361 aa12.88□□□□□ -0.35
CCDC38-203ENST00000546803 ATP5IP56385 69 aaPredicted RBP12.88□□□□□ -0.35
CCDC38-203ENST00000546803 SYNJ2BPP57105 145 aa12.88□□□□□ -0.35
CCDC38-203ENST00000546803 C2orf83Q53S99 150 aa12.88□□□□□ -0.35
CCDC38-203ENST00000546803 ACSM6Q6P461 480 aa12.88□□□□□ -0.35
CCDC38-203ENST00000546803 SPSB3Q6PJ21 355 aa12.88□□□□□ -0.35
CCDC38-203ENST00000546803 GPHB5Q86YW7 130 aa12.88□□□□□ -0.35
CCDC38-203ENST00000546803 SLC24A4Q8NFF2 622 aa12.88□□□□□ -0.35
CCDC38-203ENST00000546803 PINX1Q96BK5 328 aaKnown RBP12.88□□□□□ -0.35
CCDC38-203ENST00000546803 BSCL2Q96G97 398 aaPredicted RBP12.88□□□□□ -0.35
CCDC38-203ENST00000546803 TXN2Q99757 166 aa12.88□□□□□ -0.35
CCDC38-203ENST00000546803 SEC22CQ9BRL7 303 aa12.88□□□□□ -0.35
CCDC38-203ENST00000546803 ZMAT5Q9UDW3 170 aaKnown RBP12.88□□□□□ -0.35
CCDC38-203ENST00000546803 U3KQ87 197 aa12.88□□□□□ -0.35
CCDC38-203ENST00000546803 IGHV3-21A0A0B4J1V1 117 aa12.87□□□□□ -0.35
CCDC38-203ENST00000546803 TGOLN2O43493 480 aa12.87□□□□□ -0.35
CCDC38-203ENST00000546803 OR2C1O95371 312 aa12.87□□□□□ -0.35
CCDC38-203ENST00000546803 LY86O95711 162 aa12.87□□□□□ -0.35
CCDC38-203ENST00000546803 MFAP4P55083 255 aa12.87□□□□□ -0.35
CCDC38-203ENST00000546803 C12orf45Q8N5I9 185 aaPredicted RBP12.87□□□□□ -0.35
CCDC38-203ENST00000546803 OR9G4Q8NGQ1 327 aa12.87□□□□□ -0.35
CCDC38-203ENST00000546803 RNASEH2CQ8TDP1 164 aaKnown RBP12.87□□□□□ -0.35
CCDC38-203ENST00000546803 CIB3Q96Q77 187 aaPredicted RBP12.87□□□□□ -0.35
CCDC38-203ENST00000546803 OR4C12Q96R67 309 aa12.87□□□□□ -0.35
CCDC38-203ENST00000546803 MARVELD1Q9BSK0 173 aa12.87□□□□□ -0.35
CCDC38-203ENST00000546803 GPN1Q9HCN4 374 aaPredicted RBP12.87□□□□□ -0.35
CCDC38-203ENST00000546803 RPS10-NUDT3A0A1W2PQS6 291 aa12.86□□□□□ -0.35
CCDC38-203ENST00000546803 INMT-MINDY4F8WBC2 141 aa12.86□□□□□ -0.35
CCDC38-203ENST00000546803 LGALS9O00182 355 aa12.86□□□□□ -0.35
CCDC38-203ENST00000546803 PRAF2O60831 178 aa12.86□□□□□ -0.35
CCDC38-203ENST00000546803 IFNA10P01566 189 aa12.86□□□□□ -0.35
CCDC38-203ENST00000546803 NPY1RP25929 384 aa12.86□□□□□ -0.35
CCDC38-203ENST00000546803 ID3Q02535 119 aa12.86□□□□□ -0.35
CCDC38-203ENST00000546803 FAM106AQ4KMX7 169 aa12.86□□□□□ -0.35
CCDC38-203ENST00000546803 Q56UQ5 140 aa12.86□□□□□ -0.35
CCDC38-203ENST00000546803 PALMDQ9NP74 551 aa12.86□□□□□ -0.35
CCDC38-203ENST00000546803 PEMTQ9UBM1 199 aa12.86□□□□□ -0.35
CCDC38-203ENST00000546803 OR2T8A6NH00 312 aa12.85□□□□□ -0.35
CCDC38-203ENST00000546803 MPTX1A8MV57 137 aa12.85□□□□□ -0.35
CCDC38-203ENST00000546803 F8W735 103 aaPredicted RBP12.85□□□□□ -0.35
CCDC38-203ENST00000546803 SYNGR2O43760 224 aa12.85□□□□□ -0.35
CCDC38-203ENST00000546803 OPRK1P41145 380 aa12.85□□□□□ -0.35
CCDC38-203ENST00000546803 NPBWR1P48145 328 aa12.85□□□□□ -0.35
CCDC38-203ENST00000546803 EGFEM1PQ0D2K5 195 aa12.85□□□□□ -0.35
CCDC38-203ENST00000546803 IAH1Q2TAA2 248 aaPredicted RBP12.85□□□□□ -0.35
CCDC38-203ENST00000546803 REC114Q7Z4M0 266 aa12.85□□□□□ -0.35
CCDC38-203ENST00000546803 UBAC2Q8NBM4 344 aa12.85□□□□□ -0.35
CCDC38-203ENST00000546803 UXS1Q8NBZ7 420 aa12.85□□□□□ -0.35
CCDC38-203ENST00000546803 OR4D5Q8NGN0 318 aa12.85□□□□□ -0.35
CCDC38-203ENST00000546803 SNRPGP15A8MWD9 76 aa12.84□□□□□ -0.35
CCDC38-203ENST00000546803 NUPL2O15504 423 aaKnown RBP12.84□□□□□ -0.35
CCDC38-203ENST00000546803 SAP30O75446 220 aa12.84□□□□□ -0.35
CCDC38-203ENST00000546803 NKX2-1P43699 371 aaPredicted RBP12.84□□□□□ -0.35
CCDC38-203ENST00000546803 RPP30P78346 268 aaKnown RBP12.84□□□□□ -0.35
CCDC38-203ENST00000546803 OR10C1Q96KK4 312 aa12.84□□□□□ -0.35
CCDC38-203ENST00000546803 SIGLEC8Q9NYZ4 499 aa12.84□□□□□ -0.35
CCDC38-203ENST00000546803 VWFP04275 2813 aa12.83□□□□□ -0.36
CCDC38-203ENST00000546803 PTTG1O95997 202 aa12.83□□□□□ -0.36
CCDC38-203ENST00000546803 DEFA6Q01524 100 aa12.83□□□□□ -0.36
CCDC38-203ENST00000546803 ETFRF1Q6IPR1 90 aa12.83□□□□□ -0.36
CCDC38-203ENST00000546803 ZBTB8BQ8NAP8 495 aaPredicted RBP12.83□□□□□ -0.36
CCDC38-203ENST00000546803 TMEM170AQ8WVE7 144 aa12.83□□□□□ -0.36
CCDC38-203ENST00000546803 ZNF436Q9C0F3 470 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms