RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ANAPC1Q9H1A4 1944 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 TRBV6-6A0A0A6YYG2 114 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 PLAUP00749 431 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 GHRHP01286 108 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 ZDHHC16Q969W1 377 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 RNASE7Q9H1E1 156 aaKnown RBP10.75□□□□□ -0.69
PTCH1-212ENST00000546744 PLA2G3Q9NZ20 509 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 TDRD6O60522 2096 aaKnown RBP10.75□□□□□ -0.69
PTCH1-212ENST00000546744 A0A1W2PQF6 199 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 MAGEA5P43359 124 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 MIR17HGQ75NE6 70 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 ASCL2Q99929 193 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 AKIRIN1Q9H9L7 192 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-212ENST00000546744 HILPDAQ9Y5L2 63 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 IGLV3-32A0A0A0MS00 114 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 C17orf98A8MV24 154 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 SYS1-DBNDD2H3BUS1 97 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 YPEL1O60688 119 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 C19orf54Q5BKX5 351 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 YPEL2Q96QA6 119 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 C15orf61A6NNL5 157 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 SS18L1O75177 396 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-212ENST00000546744 IGLC2P0DOY2 106 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 IGLC3P0DOY3 106 aa10.75□□□□□ -0.69
PTCH1-212ENST00000546744 KBTBD11-OT1A0A1B0GTJ5 212 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 LOC101059948A0A1B0GTJ6 334 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 IGKCP01834 107 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 FCGR2BP31994 310 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-212ENST00000546744 DLX4Q92988 240 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-212ENST00000546744 ANAPC10Q9UM13 185 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 A0A0A6YYD4 124 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 H3BRM9 83 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 Q6ZS52 159 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 PLXNA4Q9HCM2 1894 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 F2Z2F3 143 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 CD3EP07766 207 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 CT55Q8WUE5 264 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 SGK494Q96LW2 274 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 YAE1D1Q9NRH1 226 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 LTBP2Q14767 1821 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 GVINP1Q7Z2Y8 2422 aa10.74□□□□□ -0.69
PTCH1-212ENST00000546744 COL4A6Q14031 1691 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 IGKV1D-13A0A0B4J2D9 117 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 FAM231BA6NCW3 169 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 IGKV1-13P0DP09 117 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 QRFPP83859 136 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 KLRB1Q12918 225 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 TEX45Q8NA69 505 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 TNFRSF14Q92956 283 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 MRPS18CQ9Y3D5 142 aaKnown RBP10.73□□□□□ -0.69
PTCH1-212ENST00000546744 CHD5Q8TDI0 1954 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 TPRX1Q8N7U7 411 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 GGTLC1Q9BX51 225 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 FSCN3Q9NQT6 498 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 APC2O95996 2303 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 ASXL3Q9C0F0 2248 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 TRGV8A0A0C4DH27 118 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 SPINK14Q6IE38 97 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 C16orf92Q96LL3 132 aa10.73□□□□□ -0.69
PTCH1-212ENST00000546744 GEMIN7Q9H840 131 aaKnown RBP10.73□□□□□ -0.69
PTCH1-212ENST00000546744 IGHV1-45A0A0A0MS14 117 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-212ENST00000546744 IGHV5-10-1A0A0J9YXX1 117 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 F2RL2O00254 374 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 IGHV4-34P06331 123 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 CACNG7P62955 275 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 LYPD6BQ8NI32 183 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 COQ2Q96H96 371 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 SNAI2O43623 268 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 PSG1P11464 419 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 CD69Q07108 199 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 TMEM170BQ5T4T1 132 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 FAM71F2Q6NXP2 309 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 C18orf15Q96N68 181 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 Q9H3A6 140 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 DNAJC13O75165 2243 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 UNC13CQ8NB66 2214 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 HEATR5BQ9P2D3 2071 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 NPIPB11E5RHQ5 1161 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 SRSF1Q07955 248 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTCH1-212ENST00000546744 HCP5Q6MZN7 132 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 ACP7Q6ZNF0 438 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 TEX43Q6ZNM6 134 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 KLF14Q8TD94 323 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-212ENST00000546744 DNASE2BQ8WZ79 361 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 TTTY12Q9BZ98 90 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 IGKV1D-43A0A0B4J1Z2 117 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 TRAV8-4A0A0B4J246 113 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 C9JQL5 133 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 PVRIGQ6DKI7 326 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 ZNF497Q6ZNH5 498 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 SIGLEC12Q96PQ1 595 aa10.72□□□□□ -0.69
PTCH1-212ENST00000546744 HTTP42858 3142 aa10.71□□□□□ -0.69
PTCH1-212ENST00000546744 KIR2DL5BA0A0G2JN68 375 aa10.71□□□□□ -0.69
PTCH1-212ENST00000546744 KIR2DL5BA0A0G2JPC4 375 aa10.71□□□□□ -0.69
PTCH1-212ENST00000546744 FABP5P3A8MUU1 101 aa10.71□□□□□ -0.69
PTCH1-212ENST00000546744 AHRRA9YTQ3 701 aa10.71□□□□□ -0.69
PTCH1-212ENST00000546744 PPIHO43447 177 aaKnown RBP10.71□□□□□ -0.69
PTCH1-212ENST00000546744 SSBP2P81877 361 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-212ENST00000546744 WDR82Q6UXN9 313 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms