RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PDPNQ86YL7 162 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 CLRN3Q8NCR9 226 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 OR1L8Q8NGR8 309 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 BET1LQ9NYM9 111 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 KIAA1456Q9P272 454 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 WDR83OSQ9Y284 106 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 SIGLEC9Q9Y336 463 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 KMT2BQ9UMN6 2715 aaPredicted RBP9.56□□□□□ -0.88
CCDC38-202ENST00000546386 A0A087X0M5 115 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 PIGBOS1A0A0B4J2F0 54 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 A0A1B0GX30 115 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 TMEM8BA6NDV4 472 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 ARL14EPLP0DKL9 152 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 ATP5G3P48201 142 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 ZNF343Q6P1L6 599 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 PPP1R27Q86WC6 154 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 OR4F5Q8NH21 305 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 OR4F4Q96R69 305 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 SLC25A33Q9BSK2 321 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 DPM3Q9P2X0 92 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 hCG_1809904A0A1W2PP81 198 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 A0A1W2PR64 198 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 A0A1W2PRV1 198 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 VENTXO95231 258 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 VMA21Q3ZAQ7 101 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 FAM78BQ5VT40 261 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 TEPPQ6URK8 271 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 MIR17HGQ75NE6 70 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 LY6G5BQ8NDX9 201 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 C2CD4CQ8TF44 421 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 PBDC1Q9BVG4 233 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 NPVFQ9HCQ7 196 aa9.56□□□□□ -0.88
CCDC38-202ENST00000546386 C7orf77A4D0Y5 90 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 LINC01548A6NM66 108 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 H3BQ15 152 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 SRP19P09132 144 aaKnown RBP9.55□□□□□ -0.88
CCDC38-202ENST00000546386 HOXB4P17483 251 aaPredicted RBP9.55□□□□□ -0.88
CCDC38-202ENST00000546386 CDC34P49427 236 aaPredicted RBP9.55□□□□□ -0.88
CCDC38-202ENST00000546386 RND2P52198 227 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 TPTE2P1Q5T6R2 138 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 SP5Q6BEB4 398 aaPredicted RBP9.55□□□□□ -0.88
CCDC38-202ENST00000546386 FAM168AQ92567 244 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 DMRT1Q9Y5R6 373 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 A0A1W2PPH5 198 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 ORM2P19652 201 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 USF1P22415 310 aaPredicted RBP9.55□□□□□ -0.88
CCDC38-202ENST00000546386 IL3RAP26951 378 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 SAA4P35542 130 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 ERHP84090 104 aaKnown RBP9.55□□□□□ -0.88
CCDC38-202ENST00000546386 SERF2P84101 59 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 PRSS8Q16651 343 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 DHRS7BQ6IAN0 325 aaPredicted RBP9.55□□□□□ -0.88
CCDC38-202ENST00000546386 OR52E5Q8NH55 327 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 ZNF596Q8TC21 504 aa9.55□□□□□ -0.88
CCDC38-202ENST00000546386 RPP30P78346 268 aaKnown RBP9.54□□□□□ -0.88
CCDC38-202ENST00000546386 FAM24BQ8N5W8 94 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 LINC00311Q8N616 119 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 TMEM167AQ8TBQ9 72 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 EAF1Q96JC9 268 aaPredicted RBP9.54□□□□□ -0.88
CCDC38-202ENST00000546386 SGK494Q96LW2 274 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 SELENOKQ9Y6D0 94 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 IGLC7A0M8Q6 106 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 LY6LH3BQJ8 138 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 BCL2P10415 239 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 MDKP21741 143 aaPredicted RBP9.54□□□□□ -0.88
CCDC38-202ENST00000546386 PRTN3P24158 256 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 MC5RP33032 325 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 CD81P60033 236 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 NDPQ00604 133 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 NECAP1Q8NC96 275 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 OR5B3Q8NH48 314 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 SRSF12Q8WXF0 261 aaKnown RBP9.54□□□□□ -0.88
CCDC38-202ENST00000546386 TBX15Q96SF7 602 aa9.54□□□□□ -0.88
CCDC38-202ENST00000546386 PSMG3Q9BT73 122 aaPredicted RBP9.54□□□□□ -0.88
CCDC38-202ENST00000546386 TRAV40A0A0B4J280 105 aa9.53□□□□□ -0.88
CCDC38-202ENST00000546386 OVOL3O00110 214 aa9.53□□□□□ -0.88
CCDC38-202ENST00000546386 RPL27AP46776 148 aaKnown RBP9.53□□□□□ -0.88
CCDC38-202ENST00000546386 LY6EQ16553 131 aa9.53□□□□□ -0.88
CCDC38-202ENST00000546386 POU2AF1Q16633 256 aa9.53□□□□□ -0.88
CCDC38-202ENST00000546386 AARDQ4LEZ3 155 aa9.53□□□□□ -0.88
CCDC38-202ENST00000546386 SSX3Q99909 188 aa9.53□□□□□ -0.88
CCDC38-202ENST00000546386 SNAPINO95295 136 aa9.53□□□□□ -0.88
CCDC38-202ENST00000546386 IGHV4-38-2P0DP08 117 aa9.53□□□□□ -0.88
CCDC38-202ENST00000546386 ATP6V1FQ16864 119 aa9.53□□□□□ -0.88
CCDC38-202ENST00000546386 BCL6BQ8N143 479 aaPredicted RBP9.53□□□□□ -0.88
CCDC38-202ENST00000546386 LFNGQ8NES3 379 aa9.53□□□□□ -0.88
CCDC38-202ENST00000546386 TMEM37Q8WXS4 190 aa9.53□□□□□ -0.88
CCDC38-202ENST00000546386 ACTR3CQ9C0K3 210 aaPredicted RBP9.53□□□□□ -0.88
CCDC38-202ENST00000546386 CARHSP1Q9Y2V2 147 aaKnown RBP9.53□□□□□ -0.88
CCDC38-202ENST00000546386 LOC102723971A0A1B0GUV8 181 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 C17orf112F2Z3M2 114 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 OR7C2O60412 319 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 OR5G3P0C626 314 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 ZNF137PP52743 207 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 DLK1P80370 383 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 VWC2Q2TAL6 325 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 SLC16A13Q7RTY0 426 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 BEND2Q8NDZ0 799 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 LSM4Q9Y4Z0 139 aaKnown RBP9.52□□□□□ -0.89
CCDC38-202ENST00000546386 WNK1Q9H4A3 2382 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms