RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 OR8I2Q8N0Y5 310 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 TMEM170AQ8WVE7 144 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 FLYWCH2Q96CP2 140 aaKnown RBP8.13□□□□□ -1.11
TRAF1-203ENST00000546084 SH2D2AQ9NP31 389 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 MANBALQ9NQG1 85 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 RNF7Q9UBF6 113 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 OR51B2Q9Y5P1 312 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 FBLL1A6NHQ2 334 aaKnown RBP8.13□□□□□ -1.11
TRAF1-203ENST00000546084 NKX6-3A6NJ46 265 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 FOXH1O75593 365 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 CA2P00918 260 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 IL3RAP26951 378 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 CCKARP32238 428 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 MC5RP33032 325 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 C1orf122Q6ZSJ8 110 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 CMTM2Q8TAZ6 248 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 LRRK2Q5S007 2527 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 IGKV3-7A0A075B6H7 116 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 IGHV3OR16-13A0A075B7E8 117 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 IGKV3D-15A0A087WSY6 115 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 IGHV3-74A0A0B4J1X5 117 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 PQLC2Q6ZP29 291 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 ZNF295-AS1Q8N0V1 137 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 OR4S2Q8NH73 311 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 VN1R17PQ8TDU5 208 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 NEUROG1Q92886 237 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 NAGKQ9UJ70 344 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 TMEM265A0A087WTH1 108 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 NCBP2LA6PVI3 153 aaKnown RBP8.12□□□□□ -1.11
TRAF1-203ENST00000546084 SNURFLB1AK76 121 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 MZT1Q08AG7 82 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 DAZAP2Q15038 168 aaPredicted RBP8.12□□□□□ -1.11
TRAF1-203ENST00000546084 TEX38Q6PEX7 206 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 SAXO1Q8IYX7 474 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 SPSB4Q96A44 273 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 SEPSECSQ9HD40 501 aaKnown RBP8.12□□□□□ -1.11
TRAF1-203ENST00000546084 SLC25A10Q9UBX3 287 aaPredicted RBP8.12□□□□□ -1.11
TRAF1-203ENST00000546084 HIVEP3Q5T1R4 2406 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 MGST3O14880 152 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 NDUFB3O43676 98 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 GNG4P50150 75 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 HNRNPA3P51991 378 aaKnown RBP8.12□□□□□ -1.11
TRAF1-203ENST00000546084 ERHP84090 104 aaKnown RBP8.12□□□□□ -1.11
TRAF1-203ENST00000546084 OR10G8Q8NGN5 311 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 OR2T6Q8NHC8 308 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 ABHD17AQ96GS6 310 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 GSX1Q9H4S2 264 aaPredicted RBP8.12□□□□□ -1.11
TRAF1-203ENST00000546084 PRR30Q53SZ7 412 aaPredicted RBP8.12□□□□□ -1.11
TRAF1-203ENST00000546084 Q6ZS49 121 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 MIR17HGQ75NE6 70 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 OR9G1Q8NH87 305 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 HES4Q9HCC6 221 aa8.12□□□□□ -1.11
TRAF1-203ENST00000546084 TRAV5A0A0B4J249 113 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 MMP23AO75900 390 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 UBE2G1P62253 170 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 TEPPQ6URK8 271 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 COLCA1Q6ZS62 124 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 DAZAP1Q96EP5 407 aaKnown RBP8.11□□□□□ -1.11
TRAF1-203ENST00000546084 SNHG12Q9BXW3 62 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 SAA2-SAA4A0A096LPE2 208 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 IGKV1-16P04430 117 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 SAA2P0DJI9 122 aaPredicted RBP8.11□□□□□ -1.11
TRAF1-203ENST00000546084 CDKN1BP46527 198 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 AMTP48728 403 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 LYZP61626 148 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 STPG3Q8N7X2 389 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 MDS2Q8NDY4 140 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 ZNF738Q8NE65 137 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 RNASE7Q9H1E1 156 aaKnown RBP8.11□□□□□ -1.11
TRAF1-203ENST00000546084 COL4A2P08572 1712 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 ZNF891A8MT65 544 aaPredicted RBP8.11□□□□□ -1.11
TRAF1-203ENST00000546084 CRISP2P16562 243 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 SRP14P37108 136 aaKnown RBP8.11□□□□□ -1.11
TRAF1-203ENST00000546084 LGALS4P56470 323 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 OR4A47Q6IF82 309 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 NPIPB3Q92617 1050 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 LINC00479Q96M42 142 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 HSPB9Q9BQS6 159 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 KIAA1549Q9HCM3 1950 aa8.11□□□□□ -1.11
TRAF1-203ENST00000546084 AKAP13Q12802 2813 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 RHOBP62745 196 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 FAM90A1Q86YD7 464 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 GCSAMQ8N6F7 178 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 OR5B3Q8NH48 314 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 RNASEH2CQ8TDP1 164 aaKnown RBP8.1□□□□□ -1.11
TRAF1-203ENST00000546084 NCKAP5O14513 1909 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 ABCA12Q86UK0 2595 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 HELTA6NFD8 242 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 C16orf97H3BN30 126 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 HPRT1P00492 218 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 IGHV3-23P01764 117 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 SLC25A5P05141 298 aaKnown RBP8.1□□□□□ -1.11
TRAF1-203ENST00000546084 BOD1L2Q8IYS8 172 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 STARD4Q96DR4 205 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 PIMREGQ9BSJ6 248 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 VAMP8Q9BV40 100 aa8.1□□□□□ -1.11
TRAF1-203ENST00000546084 ZNF331Q9NQX6 463 aaPredicted RBP8.1□□□□□ -1.11
TRAF1-203ENST00000546084 IGKV1D-17A0A075B6S4 117 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 ZNF253O75346 499 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 ZNF134P52741 427 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms