RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CD33P20138 364 aa15.76■□□□□ 0.11
HMGA2-211ENST00000545998 C11orf87Q6NUJ2 197 aa15.76■□□□□ 0.11
HMGA2-211ENST00000545998 VN1R17PQ8TDU5 208 aa15.76■□□□□ 0.11
HMGA2-211ENST00000545998 CCDC140Q96MF4 163 aa15.76■□□□□ 0.11
HMGA2-211ENST00000545998 S4R3C0 116 aa15.76■□□□□ 0.11
HMGA2-211ENST00000545998 FBN3Q75N90 2809 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 TRBV7-1A0A0A6YYK4 115 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 K7EIM0 57 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 SUB1P53999 127 aaKnown RBP eCLIP15.75■□□□□ 0.11
HMGA2-211ENST00000545998 FAM209BQ5JX69 171 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 UXS1Q8NBZ7 420 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 DTD1Q8TEA8 209 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 GPN1Q9HCN4 374 aaPredicted RBP15.75■□□□□ 0.11
HMGA2-211ENST00000545998 HTR2BP41595 481 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 SLURP1P55000 103 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 DCTN2Q13561 401 aaKnown RBP15.75■□□□□ 0.11
HMGA2-211ENST00000545998 OR4D5Q8NGN0 318 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 ZNF502Q8TBZ5 544 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 MISP3Q96FF7 219 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 OR10C1Q96KK4 312 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 HIPK2Q9H2X6 1198 aa15.75■□□□□ 0.11
HMGA2-211ENST00000545998 SNRPGP15A8MWD9 76 aa15.74■□□□□ 0.11
HMGA2-211ENST00000545998 I3L2K1 104 aa15.74■□□□□ 0.11
HMGA2-211ENST00000545998 HOXD3P31249 432 aaPredicted RBP15.74■□□□□ 0.11
HMGA2-211ENST00000545998 IAH1Q2TAA2 248 aaPredicted RBP15.74■□□□□ 0.11
HMGA2-211ENST00000545998 SCARB1Q8WTV0 552 aa15.74■□□□□ 0.11
HMGA2-211ENST00000545998 IGHV3-21A0A0B4J1V1 117 aa15.73■□□□□ 0.11
HMGA2-211ENST00000545998 BMPR1BO00238 502 aa15.73■□□□□ 0.11
HMGA2-211ENST00000545998 CCSO14618 274 aa15.73■□□□□ 0.11
HMGA2-211ENST00000545998 ZP3P21754 424 aa15.73■□□□□ 0.11
HMGA2-211ENST00000545998 C2orf83Q53S99 150 aa15.73■□□□□ 0.11
HMGA2-211ENST00000545998 CLEC19AQ6UXS0 136 aa15.73■□□□□ 0.11
HMGA2-211ENST00000545998 DLX4Q92988 240 aaPredicted RBP15.73■□□□□ 0.11
HMGA2-211ENST00000545998 PPP5D1E7EU14 171 aa15.72■□□□□ 0.11
HMGA2-211ENST00000545998 MED6O75586 246 aa15.72■□□□□ 0.11
HMGA2-211ENST00000545998 MT-CO2P00403 227 aa15.72■□□□□ 0.11
HMGA2-211ENST00000545998 ID3Q02535 119 aa15.72■□□□□ 0.11
HMGA2-211ENST00000545998 ZBTB8BQ8NAP8 495 aaPredicted RBP15.72■□□□□ 0.11
HMGA2-211ENST00000545998 SLC24A4Q8NFF2 622 aa15.72■□□□□ 0.11
HMGA2-211ENST00000545998 TMEM170AQ8WVE7 144 aa15.72■□□□□ 0.11
HMGA2-211ENST00000545998 DCUN1D4Q92564 292 aa15.72■□□□□ 0.11
HMGA2-211ENST00000545998 RCC1LQ96I51 464 aaKnown RBP15.72■□□□□ 0.11
HMGA2-211ENST00000545998 MAGT1Q9H0U3 335 aa15.72■□□□□ 0.11
HMGA2-211ENST00000545998 U3KQ87 197 aa15.72■□□□□ 0.11
HMGA2-211ENST00000545998 SYNGR2O43760 224 aa15.71■□□□□ 0.11
HMGA2-211ENST00000545998 CLEC3BP05452 202 aa15.71■□□□□ 0.11
HMGA2-211ENST00000545998 PINX1Q96BK5 328 aaKnown RBP15.71■□□□□ 0.11
HMGA2-211ENST00000545998 ATP6V0BQ99437 205 aa15.71■□□□□ 0.11
HMGA2-211ENST00000545998 C21orf62Q9NYP8 219 aa15.71■□□□□ 0.11
HMGA2-211ENST00000545998 F8W735 103 aaPredicted RBP15.7■□□□□ 0.1
HMGA2-211ENST00000545998 CORTO00230 105 aa15.7■□□□□ 0.1
HMGA2-211ENST00000545998 IAPPP10997 89 aa15.7■□□□□ 0.1
HMGA2-211ENST00000545998 IGLL1P15814 213 aa15.7■□□□□ 0.1
HMGA2-211ENST00000545998 NPY1RP25929 384 aa15.7■□□□□ 0.1
HMGA2-211ENST00000545998 KLF5Q13887 457 aaPredicted RBP15.7■□□□□ 0.1
HMGA2-211ENST00000545998 FAM25EA8MYX2 175 aa15.7■□□□□ 0.1
HMGA2-211ENST00000545998 GPR183P32249 361 aa15.7■□□□□ 0.1
HMGA2-211ENST00000545998 ARL3P36405 182 aa15.7■□□□□ 0.1
HMGA2-211ENST00000545998 NKX2-1P43699 371 aaPredicted RBP15.7■□□□□ 0.1
HMGA2-211ENST00000545998 RPEL1Q2QD12 228 aa15.7■□□□□ 0.1
HMGA2-211ENST00000545998 GSKIPQ9P0R6 139 aa15.7■□□□□ 0.1
HMGA2-211ENST00000545998 OVOL1O14753 267 aa15.69■□□□□ 0.1
HMGA2-211ENST00000545998 GGCTO75223 188 aaKnown RBP15.69■□□□□ 0.1
HMGA2-211ENST00000545998 IFNA10P01566 189 aa15.69■□□□□ 0.1
HMGA2-211ENST00000545998 IGHV3-48P01763 117 aa15.69■□□□□ 0.1
HMGA2-211ENST00000545998 FCGR2BP31994 310 aaPredicted RBP15.69■□□□□ 0.1
HMGA2-211ENST00000545998 POLR2GP62487 172 aaKnown RBP eCLIP15.69■□□□□ 0.1
HMGA2-211ENST00000545998 TATDN3Q17R31 274 aa15.69■□□□□ 0.1
HMGA2-211ENST00000545998 RGS21Q2M5E4 152 aa15.69■□□□□ 0.1
HMGA2-211ENST00000545998 CIB3Q96Q77 187 aaPredicted RBP15.69■□□□□ 0.1
HMGA2-211ENST00000545998 FNDC4Q9H6D8 234 aaPredicted RBP15.69■□□□□ 0.1
HMGA2-211ENST00000545998 MEGF8Q7Z7M0 2845 aa15.68■□□□□ 0.1
HMGA2-211ENST00000545998 C5orf51A6NDU8 294 aa15.68■□□□□ 0.1
HMGA2-211ENST00000545998 OR2T8A6NH00 312 aa15.68■□□□□ 0.1
HMGA2-211ENST00000545998 G3V4G9 280 aa15.68■□□□□ 0.1
HMGA2-211ENST00000545998 ATP5IP56385 69 aaPredicted RBP15.68■□□□□ 0.1
HMGA2-211ENST00000545998 OXLD1Q5BKU9 147 aa15.68■□□□□ 0.1
HMGA2-211ENST00000545998 SAMD5Q5TGI4 173 aa15.68■□□□□ 0.1
HMGA2-211ENST00000545998 NOXA1Q86UR1 476 aa15.68■□□□□ 0.1
HMGA2-211ENST00000545998 RNASEH2CQ8TDP1 164 aaKnown RBP15.68■□□□□ 0.1
HMGA2-211ENST00000545998 BSCL2Q96G97 398 aaPredicted RBP15.68■□□□□ 0.1
HMGA2-211ENST00000545998 MCRIP2Q9BUT9 160 aaKnown RBP15.68■□□□□ 0.1
HMGA2-211ENST00000545998 ZC4H2Q9NQZ6 224 aa15.68■□□□□ 0.1
HMGA2-211ENST00000545998 C7orf66A4D0T2 115 aa15.67■□□□□ 0.1
HMGA2-211ENST00000545998 WRBO00258 174 aa15.67■□□□□ 0.1
HMGA2-211ENST00000545998 TGOLN2O43493 480 aa15.67■□□□□ 0.1
HMGA2-211ENST00000545998 OPRK1P41145 380 aa15.67■□□□□ 0.1
HMGA2-211ENST00000545998 MFAP4P55083 255 aa15.67■□□□□ 0.1
HMGA2-211ENST00000545998 SYNJ2BPP57105 145 aa15.67■□□□□ 0.1
HMGA2-211ENST00000545998 GSG1LQ6UXU4 331 aa15.67■□□□□ 0.1
HMGA2-211ENST00000545998 UBAC2Q8NBM4 344 aa15.67■□□□□ 0.1
HMGA2-211ENST00000545998 C2orf50Q96LR7 162 aa15.67■□□□□ 0.1
HMGA2-211ENST00000545998 TXN2Q99757 166 aa15.67■□□□□ 0.1
HMGA2-211ENST00000545998 C15orf62A8K5M9 175 aa15.66■□□□□ 0.1
HMGA2-211ENST00000545998 OR2C1O95371 312 aa15.66■□□□□ 0.1
HMGA2-211ENST00000545998 LY86O95711 162 aa15.66■□□□□ 0.1
HMGA2-211ENST00000545998 SCGB1D2O95969 90 aa15.66■□□□□ 0.1
HMGA2-211ENST00000545998 MLANAQ16655 118 aa15.66■□□□□ 0.1
HMGA2-211ENST00000545998 Q56UQ5 140 aa15.66■□□□□ 0.1
HMGA2-211ENST00000545998 SSSCA1O60232 199 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms