RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 SMPXQ9UHP9 88 aa14.82□□□□□ -0.04
CHD4-213ENST00000545584 GABARAPH6UMI1 98 aa14.81□□□□□ -0.04
CHD4-213ENST00000545584 IGKV1-5P01602 117 aa14.81□□□□□ -0.04
CHD4-213ENST00000545584 CD74P04233 296 aa14.81□□□□□ -0.04
CHD4-213ENST00000545584 CTSDP07339 412 aaPredicted RBP14.81□□□□□ -0.04
CHD4-213ENST00000545584 SSBP1Q04837 148 aaKnown RBP14.81□□□□□ -0.04
CHD4-213ENST00000545584 SPINK9Q5DT21 86 aa14.81□□□□□ -0.04
CHD4-213ENST00000545584 STEAP1BQ6NZ63 245 aa14.81□□□□□ -0.04
CHD4-213ENST00000545584 TMEM116Q8NCL8 245 aa14.81□□□□□ -0.04
CHD4-213ENST00000545584 RRNAD1Q96FB5 475 aaKnown RBP14.81□□□□□ -0.04
CHD4-213ENST00000545584 NXF2Q9GZY0 626 aaKnown RBP14.81□□□□□ -0.04
CHD4-213ENST00000545584 IGHV7-4-1A0A0J9YVY3 117 aa14.8□□□□□ -0.04
CHD4-213ENST00000545584 B3GALNT1O75752 331 aa14.8□□□□□ -0.04
CHD4-213ENST00000545584 IGHV3-48P01763 117 aa14.8□□□□□ -0.04
CHD4-213ENST00000545584 NPBWR1P48145 328 aa14.8□□□□□ -0.04
CHD4-213ENST00000545584 SUB1P53999 127 aaKnown RBP eCLIP14.8□□□□□ -0.04
CHD4-213ENST00000545584 MEF2DQ14814 521 aa14.8□□□□□ -0.04
CHD4-213ENST00000545584 DUSP18Q8NEJ0 188 aa14.8□□□□□ -0.04
CHD4-213ENST00000545584 OR4D10Q8NGI6 311 aa14.8□□□□□ -0.04
CHD4-213ENST00000545584 OR13C8Q8NGS7 320 aa14.8□□□□□ -0.04
CHD4-213ENST00000545584 OVOL2Q9BRP0 275 aa14.8□□□□□ -0.04
CHD4-213ENST00000545584 RHPN1-AS1Q9BWJ2 59 aa14.8□□□□□ -0.04
CHD4-213ENST00000545584 ENY2Q9NPA8 101 aa14.8□□□□□ -0.04
CHD4-213ENST00000545584 TRAV14DV4A0A0A6YYC5 116 aa14.79□□□□□ -0.04
CHD4-213ENST00000545584 CORTO00230 105 aa14.79□□□□□ -0.04
CHD4-213ENST00000545584 ST8SIA3O43173 380 aa14.79□□□□□ -0.04
CHD4-213ENST00000545584 BMI1P35226 326 aa14.79□□□□□ -0.04
CHD4-213ENST00000545584 ALDH3B2P48448 385 aa14.79□□□□□ -0.04
CHD4-213ENST00000545584 SP6Q3SY56 376 aa14.79□□□□□ -0.04
CHD4-213ENST00000545584 MARCH1Q8TCQ1 289 aa14.79□□□□□ -0.04
CHD4-213ENST00000545584 OR10C1Q96KK4 312 aa14.79□□□□□ -0.04
CHD4-213ENST00000545584 GINS3Q9BRX5 216 aa14.79□□□□□ -0.04
CHD4-213ENST00000545584 MIXL1Q9H2W2 232 aa14.79□□□□□ -0.04
CHD4-213ENST00000545584 C14orf166Q9Y224 244 aaKnown RBP14.79□□□□□ -0.04
CHD4-213ENST00000545584 A0A0B4J293 547 aa14.78□□□□□ -0.04
CHD4-213ENST00000545584 INS-IGF2F8WCM5 200 aa14.78□□□□□ -0.04
CHD4-213ENST00000545584 UBE2CO00762 179 aa14.78□□□□□ -0.04
CHD4-213ENST00000545584 CTDSP2O14595 271 aa14.78□□□□□ -0.04
CHD4-213ENST00000545584 CHEK1O14757 476 aa14.78□□□□□ -0.04
CHD4-213ENST00000545584 JTBO76095 146 aa14.78□□□□□ -0.04
CHD4-213ENST00000545584 P0C879 139 aa14.78□□□□□ -0.04
CHD4-213ENST00000545584 UCP1P25874 307 aa14.78□□□□□ -0.04
CHD4-213ENST00000545584 HOXA1P49639 335 aaPredicted RBP14.78□□□□□ -0.04
CHD4-213ENST00000545584 CMC4P56277 68 aaPredicted RBP14.78□□□□□ -0.04
CHD4-213ENST00000545584 ODF3L2Q3SX64 289 aa14.78□□□□□ -0.04
CHD4-213ENST00000545584 RNF2Q99496 336 aa14.78□□□□□ -0.04
CHD4-213ENST00000545584 C6orf62Q9GZU0 229 aaPredicted RBP14.78□□□□□ -0.04
CHD4-213ENST00000545584 IGHV3-49A0A0A0MS15 119 aa14.77□□□□□ -0.05
CHD4-213ENST00000545584 DISC1C4P0D8 188 aa14.77□□□□□ -0.05
CHD4-213ENST00000545584 ETV6P41212 452 aa14.77□□□□□ -0.05
CHD4-213ENST00000545584 SPCS2Q15005 226 aa14.77□□□□□ -0.05
CHD4-213ENST00000545584 Q6ZWC4 215 aa14.77□□□□□ -0.05
CHD4-213ENST00000545584 CLVS1Q8IUQ0 354 aaPredicted RBP14.77□□□□□ -0.05
CHD4-213ENST00000545584 STPG3Q8N7X2 389 aa14.77□□□□□ -0.05
CHD4-213ENST00000545584 RABL2AQ9UBK7 228 aaPredicted RBP14.77□□□□□ -0.05
CHD4-213ENST00000545584 RABL2BQ9UNT1 228 aa14.77□□□□□ -0.05
CHD4-213ENST00000545584 TP53TG1Q9Y2A0 90 aa14.77□□□□□ -0.05
CHD4-213ENST00000545584 KIR2DL5BA0A0G2JN68 375 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 KIR2DL5BA0A0G2JPC4 375 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 TEX13DA0A0J9YY54 714 aaPredicted RBP14.76□□□□□ -0.05
CHD4-213ENST00000545584 SPRY2O43597 315 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 CD5P06127 495 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 PAFAH1B2P68402 229 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 IL18Q14116 193 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 FAM219AQ8IW50 185 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 KIR2DL5AQ8N109 375 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 KIR2DL5BQ8NHK3 375 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 RAB2BQ8WUD1 216 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 SMIM4Q8WVI0 70 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 GALNT14Q96FL9 552 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 DIRAS2Q96HU8 199 aa14.76□□□□□ -0.05
CHD4-213ENST00000545584 SCGB2A1O75556 95 aa14.75□□□□□ -0.05
CHD4-213ENST00000545584 AKAIN1P0CW23 69 aa14.75□□□□□ -0.05
CHD4-213ENST00000545584 RPL35AP18077 110 aaKnown RBP14.75□□□□□ -0.05
CHD4-213ENST00000545584 TFPI2P48307 235 aa14.75□□□□□ -0.05
CHD4-213ENST00000545584 SURF2Q15527 256 aaPredicted RBP14.75□□□□□ -0.05
CHD4-213ENST00000545584 FAAP20Q6NZ36 180 aa14.75□□□□□ -0.05
CHD4-213ENST00000545584 ZNF600Q6ZNG1 722 aa14.75□□□□□ -0.05
CHD4-213ENST00000545584 ZNF414Q96IQ9 312 aa14.75□□□□□ -0.05
CHD4-213ENST00000545584 IGKV3-7A0A075B6H7 116 aa14.74□□□□□ -0.05
CHD4-213ENST00000545584 IGHV3OR16-13A0A075B7E8 117 aa14.74□□□□□ -0.05
CHD4-213ENST00000545584 IGHV3-74A0A0B4J1X5 117 aa14.74□□□□□ -0.05
CHD4-213ENST00000545584 OR5AC1P0C628 307 aa14.74□□□□□ -0.05
CHD4-213ENST00000545584 RNASE2P10153 161 aaKnown RBP14.74□□□□□ -0.05
CHD4-213ENST00000545584 DHODHQ02127 395 aa14.74□□□□□ -0.05
CHD4-213ENST00000545584 DEFB135Q30KP9 77 aa14.74□□□□□ -0.05
CHD4-213ENST00000545584 TOMM20LQ6UXN7 152 aa14.74□□□□□ -0.05
CHD4-213ENST00000545584 WFDC3Q8IUB2 231 aa14.74□□□□□ -0.05
CHD4-213ENST00000545584 BCL7BQ9BQE9 202 aa14.74□□□□□ -0.05
CHD4-213ENST00000545584 TMEM222Q9H0R3 208 aa14.74□□□□□ -0.05
CHD4-213ENST00000545584 NAA60Q9H7X0 242 aa14.74□□□□□ -0.05
CHD4-213ENST00000545584 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.74□□□□□ -0.05
CHD4-213ENST00000545584 DYNC2H1Q8NCM8 4307 aaKnown RBP14.73□□□□□ -0.05
CHD4-213ENST00000545584 CTDSPLO15194 276 aa14.73□□□□□ -0.05
CHD4-213ENST00000545584 NOL3O60936 208 aaKnown RBP14.73□□□□□ -0.05
CHD4-213ENST00000545584 CDS2O95674 445 aa14.73□□□□□ -0.05
CHD4-213ENST00000545584 TMEM50AO95807 157 aa14.73□□□□□ -0.05
CHD4-213ENST00000545584 OPRK1P41145 380 aa14.73□□□□□ -0.05
CHD4-213ENST00000545584 SPCS3P61009 180 aa14.73□□□□□ -0.05
CHD4-213ENST00000545584 PVRIGQ6DKI7 326 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms