RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 FAM162BQ5T6X4 162 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 FAM104BQ5XKR9 115 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 RTN4IP1Q8WWV3 396 aaPredicted RBP2.37□□□□□ -2.03
SNHG1-222ENST00000545308 C11orf40Q8WZ69 217 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 GPR22Q99680 433 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 THTPAQ9BU02 230 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 C16orf95Q9H693 158 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 VPS29Q9UBQ0 182 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 NAGKQ9UJ70 344 aa2.37□□□□□ -2.03
SNHG1-222ENST00000545308 KMT2CQ8NEZ4 4911 aaKnown RBP2.36□□□□□ -2.03
SNHG1-222ENST00000545308 IGLV4-60A0A075B6I1 120 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 IGHV2-26A0A0B4J1V2 119 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 TRAV8-2A0A0B4J237 113 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 IGHV1-18A0A0C4DH31 117 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 GNG14A0A1W2PPG7 69 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 LRCOL1A6NCL2 159 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 CD300LBA8K4G0 201 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 A8MUU9 505 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 EFCAB9A8MZ26 197 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.36□□□□□ -2.03
SNHG1-222ENST00000545308 E2F6O75461 281 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 CXorf1O96002 111 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 OR5AC1P0C628 307 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 ZNF3P17036 446 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 ZNF32P17041 273 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 SLC6A1P30531 599 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 GRPRP30550 384 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 GABRA3P34903 492 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 MARCKSL1P49006 195 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 CLDN12P56749 244 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 FUT5Q11128 374 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 DNAL1Q4LDG9 190 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 SPIN4Q56A73 249 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 NXNL2Q5VZ03 156 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 SLC25A34Q6PIV7 304 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 CASP12Q6UXS9 341 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 AAED1Q7RTV5 226 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 NATD1Q8N6N6 113 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 OR5L1Q8NGL2 311 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 GPR119Q8TDV5 335 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 C1orf54Q8WWF1 131 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 PPP1R36Q96LQ0 422 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 B9D2Q9BPU9 175 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 BCL2L14Q9BZR8 327 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 TAS2R7Q9NYW3 318 aa2.36□□□□□ -2.03
SNHG1-222ENST00000545308 TBL2Q9Y4P3 447 aaKnown RBP2.36□□□□□ -2.03
SNHG1-222ENST00000545308 IGHV3-15A0A0B4J1V0 119 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 IZUMO1RA6ND01 250 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 FTCDNL1E5RQL4 147 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 LYNX1G3V0Z9 82 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 RPL36A-HNRNPH2H7BZ11 118 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 K7EPK0 472 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 ISLRO14498 428 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 ATP8B1O43520 1251 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 IGHV1-46P01743 117 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 IGHMP01871 453 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 LYNX1P0DP58 116 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 CRABP2P29373 138 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 TGM4P49221 684 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 BLVRAP53004 296 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 KLF3P57682 345 aaPredicted RBP2.35□□□□□ -2.03
SNHG1-222ENST00000545308 FAM3AP98173 230 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 TMEM155Q4W5P6 130 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 TTC33Q6PID6 262 aaPredicted RBP2.35□□□□□ -2.03
SNHG1-222ENST00000545308 TBPL2Q6SJ96 375 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 OLIG3Q7RTU3 272 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 COMMD6Q7Z4G1 85 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 FAM19A3Q7Z5A8 133 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 DPPA2Q7Z7J5 298 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 ZNF563Q8TA94 476 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 STACQ99469 402 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 PRSS27Q9BQR3 290 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 EBPLQ9BY08 206 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 LINC00470Q9BZP3 86 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 ACER3Q9NUN7 267 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 TAAR3PQ9P1P4 343 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 OR5V1Q9UGF6 321 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 C14orf166Q9Y224 244 aaKnown RBP2.35□□□□□ -2.03
SNHG1-222ENST00000545308 U3KQK5 164 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 TANC2Q9HCD6 1990 aa2.35□□□□□ -2.03
SNHG1-222ENST00000545308 IGKV2-28A0A075B6P5 120 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 C16orf90A8MZG2 172 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 F5H5K5 113 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 H3BQF6 201 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 PHYHO14832 338 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 SMIM24O75264 130 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 CRTAPO75718 401 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-222ENST00000545308 KCNK2O95069 426 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 IGKV2D-28P01615 120 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 RBP1P09455 135 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 PYCR1P32322 319 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 HSPA13P48723 471 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 NAA20P61599 178 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 SLC35A2P78381 396 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 CCL8P80075 99 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 H3F3AP84243 136 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 GNA13Q14344 377 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 KCNJ8Q15842 424 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 C4orf26Q17RF5 130 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 ELP2Q6IA86 826 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms