RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 ZNF674Q2M3X9 581 aa13.33□□□□□ -0.28
CHFR-224ENST00000545046 ETFRF1Q6IPR1 90 aa13.33□□□□□ -0.28
CHFR-224ENST00000545046 LHFPL4Q7Z7J7 247 aa13.33□□□□□ -0.28
CHFR-224ENST00000545046 SEPSECSQ9HD40 501 aaKnown RBP13.33□□□□□ -0.28
CHFR-224ENST00000545046 UBE2G2P60604 165 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 CST9LP1Q5W188 147 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 HIST1H2BAQ96A08 127 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 RPUSD4Q96CM3 377 aaKnown RBP13.32□□□□□ -0.28
CHFR-224ENST00000545046 C19orf24Q9BVV8 132 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 A0A1W2PRD5 423 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 A0A1W2PRF3 423 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 A0A1W2PRM7 423 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 LGALS4P56470 323 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 TMEM241Q24JQ0 296 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 FAM78BQ5VT40 261 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 ZNF114Q8NC26 417 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 TXNDC17Q9BRA2 123 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 FNDC4Q9H6D8 234 aaPredicted RBP13.32□□□□□ -0.28
CHFR-224ENST00000545046 NAT8Q9UHE5 227 aa13.32□□□□□ -0.28
CHFR-224ENST00000545046 PDE6DO43924 150 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 CRYBA1P05813 215 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 MMDQ15546 238 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 SPATA31B1PQ5VZV4 182 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 CYP2G1PQ6ZSU1 146 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 CFHR4Q92496 578 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 BPESC1Q9GZL8 116 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 FUT9Q9Y231 359 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 TACC2O95359 2948 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 MOSP00540 346 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 GATA2P23769 480 aaPredicted RBP13.31□□□□□ -0.28
CHFR-224ENST00000545046 GCHFRP30047 84 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 PDLIM4P50479 330 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 FLI1Q01543 452 aaPredicted RBP13.31□□□□□ -0.28
CHFR-224ENST00000545046 HABP2Q14520 560 aaPredicted RBP13.31□□□□□ -0.28
CHFR-224ENST00000545046 CCDC144NLQ6NUI1 221 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 FAM24BQ8N5W8 94 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 NPIPB3Q92617 1050 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 MISP3Q96FF7 219 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 PARLQ9H300 379 aa13.31□□□□□ -0.28
CHFR-224ENST00000545046 IGHV2-70DA0A0C4DH43 119 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 AREGP15514 252 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 HOXB4P17483 251 aaPredicted RBP13.3□□□□□ -0.28
CHFR-224ENST00000545046 RNF212Q495C1 297 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 MINOS1Q5TGZ0 78 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 SIRPDQ9H106 197 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 MINOS1-NBL1R4GNA1 71 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 NAV3Q8IVL0 2385 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 OOSP1A8MZH6 123 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 F6UZH7 168 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 CORTO00230 105 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 NBR2O15453 112 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 CLN5O75503 358 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 CNIH1O95406 144 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 APELAP0DMC3 54 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 FOLR2P14207 255 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 LMO4P61968 165 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 PAX2Q02962 417 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 HES1Q14469 280 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 SSX2Q16385 188 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 SMUG1Q53HV7 270 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 PVRIGQ6DKI7 326 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 OR1P1Q8NH06 330 aa13.3□□□□□ -0.28
CHFR-224ENST00000545046 SRSF12Q8WXF0 261 aaKnown RBP13.3□□□□□ -0.28
CHFR-224ENST00000545046 TECRQ9NZ01 308 aaKnown RBP13.3□□□□□ -0.28
CHFR-224ENST00000545046 IGSF10Q6WRI0 2623 aa13.29□□□□□ -0.28
CHFR-224ENST00000545046 CXorf65A6NEN9 183 aa13.29□□□□□ -0.28
CHFR-224ENST00000545046 FCN1O00602 326 aa13.29□□□□□ -0.28
CHFR-224ENST00000545046 TOX4O94842 621 aa13.29□□□□□ -0.28
CHFR-224ENST00000545046 IGHV4-39P01824 125 aa13.29□□□□□ -0.28
CHFR-224ENST00000545046 MIR17HGQ75NE6 70 aa13.29□□□□□ -0.28
CHFR-224ENST00000545046 THAP8Q8NA92 274 aa13.29□□□□□ -0.28
CHFR-224ENST00000545046 NPBQ8NG41 125 aa13.29□□□□□ -0.28
CHFR-224ENST00000545046 OR2T10Q8NGZ9 312 aa13.29□□□□□ -0.28
CHFR-224ENST00000545046 C22orf15Q8WYQ4 148 aa13.29□□□□□ -0.28
CHFR-224ENST00000545046 ACACBO00763 2458 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 TEX22C9J3V5 150 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 FOXH1O75593 365 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 ATP5G3P48201 142 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 TAS2R45P59539 299 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 EAF1Q96JC9 268 aaPredicted RBP13.28□□□□□ -0.28
CHFR-224ENST00000545046 RNF2Q99496 336 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 CCL19Q99731 98 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 SRSF8Q9BRL6 282 aaKnown RBP13.28□□□□□ -0.28
CHFR-224ENST00000545046 PRELID1Q9Y255 219 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 TCRBV4S1A1TA0A5B7 111 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 IGHV3-48P01763 117 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 OR5G3P0C626 314 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 RND2P52198 227 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 SELENOTP62341 195 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 ADIRFQ15847 76 aa13.28□□□□□ -0.28
CHFR-224ENST00000545046 F11RQ9Y624 299 aaKnown RBP13.28□□□□□ -0.28
CHFR-224ENST00000545046 NDUFA3O95167 84 aa13.27□□□□□ -0.28
CHFR-224ENST00000545046 RAB5AP20339 215 aa13.27□□□□□ -0.28
CHFR-224ENST00000545046 SSBP2P81877 361 aaPredicted RBP13.27□□□□□ -0.28
CHFR-224ENST00000545046 SLC25A33Q9BSK2 321 aa13.27□□□□□ -0.28
CHFR-224ENST00000545046 MRPL32Q9BYC8 188 aaKnown RBP13.27□□□□□ -0.28
CHFR-224ENST00000545046 DNAJC4Q9NNZ3 241 aa13.27□□□□□ -0.28
CHFR-224ENST00000545046 TMEM167BQ9NRX6 74 aa13.27□□□□□ -0.28
CHFR-224ENST00000545046 TSPAN9O75954 239 aa13.27□□□□□ -0.29
CHFR-224ENST00000545046 CRYGCP07315 174 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms