RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 NAGKQ9UJ70 344 aa10.59□□□□□ -0.71
CPSF7-223ENST00000544669 CACNA1DQ01668 2161 aa10.59□□□□□ -0.71
CPSF7-223ENST00000544669 MYO15AQ9UKN7 3530 aa10.59□□□□□ -0.71
CPSF7-223ENST00000544669 A0A0G2JNJ9 132 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 DPRXA6NFQ7 191 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 TNFRSF13BO14836 293 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-223ENST00000544669 UBE2L3P68036 154 aaKnown RBP10.58□□□□□ -0.72
CPSF7-223ENST00000544669 PAX2Q02962 417 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 IBA57Q5T440 356 aaKnown RBP10.58□□□□□ -0.72
CPSF7-223ENST00000544669 C1orf194Q5T5A4 169 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 CDPF1Q6NVV7 123 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 BAGE3Q86Y29 109 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 BAGE2Q86Y30 109 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 Q9UFV3 132 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 SNURFLB1AK76 121 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 RBP4P02753 201 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 BSPH1Q075Z2 132 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 DUX4L9Q6RFH8 374 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-223ENST00000544669 OR5AU1Q8NGC0 362 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 H1FXQ92522 213 aaKnown RBP10.58□□□□□ -0.72
CPSF7-223ENST00000544669 RNASE6Q93091 150 aaKnown RBP10.58□□□□□ -0.72
CPSF7-223ENST00000544669 ST6GALNAC6Q969X2 333 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 PERPQ96FX8 193 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 RNF5Q99942 180 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 PAXXQ9BUH6 204 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 PRO1933Q9H354 126 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 DYNLRB1Q9NP97 96 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 ZNF835Q9Y2P0 537 aa10.58□□□□□ -0.72
CPSF7-223ENST00000544669 IGKV1OR2-108A0A075B7D4 117 aa10.57□□□□□ -0.72
CPSF7-223ENST00000544669 SMIM27A0A1W2PRY6 76 aa10.57□□□□□ -0.72
CPSF7-223ENST00000544669 M0QZK8 103 aa10.57□□□□□ -0.72
CPSF7-223ENST00000544669 AMY1AP04745 511 aa10.57□□□□□ -0.72
CPSF7-223ENST00000544669 REG1AP05451 166 aa10.57□□□□□ -0.72
CPSF7-223ENST00000544669 CHRNB4P30926 498 aa10.57□□□□□ -0.72
CPSF7-223ENST00000544669 BRS3P32247 399 aa10.57□□□□□ -0.72
CPSF7-223ENST00000544669 FAM162BQ5T6X4 162 aa10.57□□□□□ -0.72
CPSF7-223ENST00000544669 GFRALQ6UXV0 394 aa10.57□□□□□ -0.72
CPSF7-223ENST00000544669 CCL17Q92583 94 aa10.57□□□□□ -0.72
CPSF7-223ENST00000544669 RND1Q92730 232 aa10.57□□□□□ -0.72
CPSF7-223ENST00000544669 AMMECR1Q9Y4X0 333 aaPredicted RBP10.57□□□□□ -0.72
CPSF7-223ENST00000544669 PSMB11A5LHX3 300 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 IZUMO1RA6ND01 250 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 B9A039 149 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 IER3P46695 156 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 TDGF1P3P51864 188 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 GTF3C1Q12789 2109 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 TMEM155Q4W5P6 130 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 UTF1Q5T230 341 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 PVRIGQ6DKI7 326 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 OR8I2Q8N0Y5 310 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 ZCCHC24Q8N2G6 241 aaKnown RBP10.56□□□□□ -0.72
CPSF7-223ENST00000544669 WIPF2Q8TF74 440 aaPredicted RBP10.56□□□□□ -0.72
CPSF7-223ENST00000544669 ZNF503Q96F45 646 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 SRSF8Q9BRL6 282 aaKnown RBP10.56□□□□□ -0.72
CPSF7-223ENST00000544669 ZNF331Q9NQX6 463 aaPredicted RBP10.56□□□□□ -0.72
CPSF7-223ENST00000544669 NAT8BQ9UHF3 227 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 RNF24Q9Y225 148 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 SLC17A3O00476 420 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 HIST1H1EP10412 219 aaKnown RBP10.56□□□□□ -0.72
CPSF7-223ENST00000544669 HNF1AP20823 631 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 CBLN1P23435 193 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 APOBEC3AP31941 199 aaPredicted RBP10.56□□□□□ -0.72
CPSF7-223ENST00000544669 SIGLECL1Q8N7X8 197 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 TRGV9Q99603 122 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 SLC25A2Q9BXI2 301 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 SAMD10Q9BYL1 202 aa10.56□□□□□ -0.72
CPSF7-223ENST00000544669 GGTLC3B5MD39 225 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 IGHV1-8P0DP01 117 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 MYOD1P15172 320 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 CCL3L1P16619 93 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 PLA2G5P39877 138 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 CASP6P55212 293 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 CYB5R2Q6BCY4 276 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 S100A7AQ86SG5 101 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 OR10W1Q8NGF6 305 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 GRAMD2BQ96HH9 432 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 FAM167A-AS1Q96KT0 104 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 IGF2BP2-AS1Q96M15 143 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 TMEM133Q9H2Q1 129 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 ZNF586Q9NXT0 402 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 HEATR1Q9H583 2144 aaKnown RBP10.55□□□□□ -0.72
CPSF7-223ENST00000544669 WDFY3Q8IZQ1 3526 aa10.55□□□□□ -0.72
CPSF7-223ENST00000544669 ZNF705FA8MVS1 300 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-223ENST00000544669 CRYGCP07315 174 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 ZNF705DP0CH99 300 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-223ENST00000544669 ZNF705BP0CI00 300 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-223ENST00000544669 MGST1P10620 155 aaKnown RBP10.54□□□□□ -0.72
CPSF7-223ENST00000544669 CA7P43166 264 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 USF2Q15853 346 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-223ENST00000544669 TMEM183BQ1AE95 376 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 ZNF600Q6ZNG1 722 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 TMEM256Q8N2U0 113 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 NPIPB3Q92617 1050 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 ZNF355PQ9NSJ1 428 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 SOX21Q9Y651 276 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-223ENST00000544669 INTS1Q8N201 2190 aaKnown RBP10.54□□□□□ -0.72
CPSF7-223ENST00000544669 KIR2DL5BA0A0G2JN68 375 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 KIR2DL5BA0A0G2JPC4 375 aa10.54□□□□□ -0.72
CPSF7-223ENST00000544669 PEX7O00628 323 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms