RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	CTSD	P07339	412 aa	Predicted RBP	0.88	□□□□□ -2.27
RAP1B-231	ENST00000544639	FKBP2	P26885	142 aa	Known RBP	0.88	□□□□□ -2.27
RAP1B-231	ENST00000544639	NKX2-5	P52952	324 aa	Predicted RBP	0.88	□□□□□ -2.27
RAP1B-231	ENST00000544639	SPCS3	P61009	180 aa		0.88	□□□□□ -2.27
RAP1B-231	ENST00000544639	CDK10	Q15131	360 aa		0.88	□□□□□ -2.27
RAP1B-231	ENST00000544639	C8orf74	Q6P047	294 aa		0.88	□□□□□ -2.27
RAP1B-231	ENST00000544639	BPIFA4P	Q86YQ2	179 aa		0.88	□□□□□ -2.27
RAP1B-231	ENST00000544639	C20orf196	Q8IYI0	205 aa		0.88	□□□□□ -2.27
RAP1B-231	ENST00000544639	FAM19A2	Q8N3H0	131 aa		0.88	□□□□□ -2.27
RAP1B-231	ENST00000544639	LINC00471	Q8N535	108 aa		0.88	□□□□□ -2.27
RAP1B-231	ENST00000544639	OR52E6	Q96RD3	313 aa		0.88	□□□□□ -2.27
RAP1B-231	ENST00000544639	FBXL12	Q9NXK8	326 aa		0.88	□□□□□ -2.27
RAP1B-231	ENST00000544639	IGKV1D-42	A0A075B6H8	117 aa		0.87	□□□□□ -2.27
RAP1B-231	ENST00000544639	TNNC2	P02585	160 aa		0.87	□□□□□ -2.27
RAP1B-231	ENST00000544639	HIST1H1T	P22492	207 aa	Predicted RBP	0.87	□□□□□ -2.27
RAP1B-231	ENST00000544639	DEFB115	Q30KQ5	88 aa		0.87	□□□□□ -2.27
RAP1B-231	ENST00000544639	OR4D11	Q8NGI4	311 aa		0.87	□□□□□ -2.27
RAP1B-231	ENST00000544639	OR4C6	Q8NH72	309 aa		0.87	□□□□□ -2.27
RAP1B-231	ENST00000544639	IMP4	Q96G21	291 aa	Known RBP	0.87	□□□□□ -2.27
RAP1B-231	ENST00000544639	PPP1R2P1	Q96PQ5	205 aa		0.87	□□□□□ -2.27
RAP1B-231	ENST00000544639	NIPSNAP1	Q9BPW8	284 aa		0.87	□□□□□ -2.27
RAP1B-231	ENST00000544639	PRTFDC1	Q9NRG1	225 aa		0.87	□□□□□ -2.27
RAP1B-231	ENST00000544639	AHNAK2	Q8IVF2	5795 aa		0.87	□□□□□ -2.27
RAP1B-231	ENST00000544639	COL4A5	P29400	1685 aa		0.87	□□□□□ -2.27
RAP1B-231	ENST00000544639	PSMD12	O00232	456 aa	Predicted RBP	0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	FAAH	O00519	579 aa		0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	FADS1	O60427	444 aa		0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	CRYGA	P11844	174 aa		0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	SPI1	P17947	270 aa		0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	PSME3	P61289	254 aa		0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	SNRPD2	P62316	118 aa	Known RBP	0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	CCDC122	Q5T0U0	273 aa		0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	CLVS1	Q8IUQ0	354 aa	Predicted RBP	0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	TERB2	Q8NHR7	220 aa		0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	TOMM6	Q96B49	74 aa		0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	SLC50A1	Q9BRV3	221 aa		0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	C11orf68	Q9H3H3	251 aa	Known RBP	0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	EML6	Q6ZMW3	1958 aa		0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	DOCK5	Q9H7D0	1870 aa		0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639	SNAPC4	Q5SXM2	1469 aa		0.86	□□□□□ -2.27
RAP1B-231	ENST00000544639		A0A0D9SG52	128 aa		0.85	□□□□□ -2.27
RAP1B-231	ENST00000544639	CD79A	P11912	226 aa		0.85	□□□□□ -2.27
RAP1B-231	ENST00000544639	KCNJ8	Q15842	424 aa		0.85	□□□□□ -2.27
RAP1B-231	ENST00000544639	MIR17HG	Q75NE6	70 aa		0.85	□□□□□ -2.27
RAP1B-231	ENST00000544639	ANKRD29	Q8N6D5	301 aa		0.85	□□□□□ -2.27
RAP1B-231	ENST00000544639	H1FX	Q92522	213 aa	Known RBP	0.85	□□□□□ -2.27
RAP1B-231	ENST00000544639	GINS4	Q9BRT9	223 aa		0.85	□□□□□ -2.27
RAP1B-231	ENST00000544639	COMMD5	Q9GZQ3	224 aa		0.85	□□□□□ -2.27
RAP1B-231	ENST00000544639	PKIG	Q9Y2B9	76 aa		0.85	□□□□□ -2.27
RAP1B-231	ENST00000544639	TNRC6B	Q9UPQ9	1833 aa	Known RBP	0.85	□□□□□ -2.27
RAP1B-231	ENST00000544639	TOPBP1	Q92547	1522 aa		0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	WRN	Q14191	1432 aa	Predicted RBP eCLIP	0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639		A0A087WX48	190 aa		0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	DPRX	A6NFQ7	191 aa		0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	AHSA1	O95433	338 aa		0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	ASAH2B	P0C7U1	165 aa		0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	BRS3	P32247	399 aa		0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	RPL5	P46777	297 aa	Known RBP	0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	SULT1A1	P50225	295 aa		0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	RPS20	P60866	119 aa	Known RBP	0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	ACOT6	Q3I5F7	207 aa	Predicted RBP	0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	LPCAT3	Q6P1A2	487 aa		0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	DPPA3	Q6W0C5	159 aa		0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	PHF13	Q86YI8	300 aa	Predicted RBP	0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	OR4E2	Q8NGC2	313 aa		0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	OR5A1	Q8NGJ0	315 aa		0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	MRPL57	Q9BQC6	102 aa	Known RBP	0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	MRPL27	Q9P0M9	148 aa	Known RBP	0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	TMEM56-RWDD3	S4R434	201 aa		0.84	□□□□□ -2.27
RAP1B-231	ENST00000544639	NUP155	O75694	1391 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	MTUS2	Q5JR59	1369 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	TRAV9-1	A0A075B6T8	112 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	LOC110117498	A0A087WWA1	95 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	EXOC1L	A0A1B0GW35	172 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	C2orf70	A6NJV1	201 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	BUB1B-PAK6	H3BSN5	160 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639		M0R036	132 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	OR2T1	O43869	369 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	IFNA10	P01566	189 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	IFNA16	P05015	189 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	COX6A1	P12074	109 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	MIF	P14174	115 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	IMPG1	Q17R60	797 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	SPANXN5	Q5MJ07	72 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	LINC00311	Q8N616	119 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	DNAJC9	Q8WXX5	260 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	TSPAN32	Q96QS1	320 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	MIXL1	Q9H2W2	232 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	VPS29	Q9UBQ0	182 aa		0.83	□□□□□ -2.28
RAP1B-231	ENST00000544639	RIC1	Q4ADV7	1423 aa		0.82	□□□□□ -2.28
RAP1B-231	ENST00000544639	IGKV1-9	A0A0C4DH69	117 aa		0.82	□□□□□ -2.28
RAP1B-231	ENST00000544639	GOLGA6L19	H0YKK7	550 aa		0.82	□□□□□ -2.28
RAP1B-231	ENST00000544639	C19orf84	I3L1E1	186 aa		0.82	□□□□□ -2.28
RAP1B-231	ENST00000544639	CHP2	O43745	196 aa		0.82	□□□□□ -2.28
RAP1B-231	ENST00000544639	OR1I1	O60431	355 aa		0.82	□□□□□ -2.28
RAP1B-231	ENST00000544639	PDE6H	Q13956	83 aa		0.82	□□□□□ -2.28
RAP1B-231	ENST00000544639	RHEB	Q15382	184 aa		0.82	□□□□□ -2.28
RAP1B-231	ENST00000544639	KHDC3L	Q587J8	217 aa		0.82	□□□□□ -2.28
RAP1B-231	ENST00000544639	PARD6G	Q9BYG4	376 aa	Predicted RBP	0.82	□□□□□ -2.28
RAP1B-231	ENST00000544639	SLC39A9	Q9NUM3	307 aa		0.82	□□□□□ -2.28

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