RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 CRYGCP07315 174 aa7.5□□□□□ -1.21
YBX3-215ENST00000544504 RNASE1P07998 156 aaKnown RBP7.5□□□□□ -1.21
YBX3-215ENST00000544504 RNASE2P10153 161 aaKnown RBP7.5□□□□□ -1.21
YBX3-215ENST00000544504 DEFA4P12838 97 aa7.5□□□□□ -1.21
YBX3-215ENST00000544504 SSBP2P81877 361 aaPredicted RBP7.5□□□□□ -1.21
YBX3-215ENST00000544504 EWSR1Q01844 656 aaKnown RBP eCLIP7.5□□□□□ -1.21
YBX3-215ENST00000544504 WT1-ASQ06250 92 aa7.5□□□□□ -1.21
YBX3-215ENST00000544504 EXOSC2Q13868 293 aaKnown RBP7.5□□□□□ -1.21
YBX3-215ENST00000544504 ETFRF1Q6IPR1 90 aa7.5□□□□□ -1.21
YBX3-215ENST00000544504 UNQ5815/PRO19632Q6UWF5 114 aa7.5□□□□□ -1.21
YBX3-215ENST00000544504 TTC9CQ8N5M4 171 aa7.5□□□□□ -1.21
YBX3-215ENST00000544504 OR10W1Q8NGF6 305 aa7.5□□□□□ -1.21
YBX3-215ENST00000544504 OR1S2Q8NGQ3 325 aa7.5□□□□□ -1.21
YBX3-215ENST00000544504 FAM110DQ8TAY7 271 aaPredicted RBP7.5□□□□□ -1.21
YBX3-215ENST00000544504 TNFRSF19Q9NS68 423 aa7.5□□□□□ -1.21
YBX3-215ENST00000544504 F11RQ9Y624 299 aaKnown RBP7.5□□□□□ -1.21
YBX3-215ENST00000544504 BORCS7-ASMTA0A0B4J1R7 106 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 IGSF23A1L1A6 192 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 RNF222A6NCQ9 220 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 C15orf62A8K5M9 175 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 FNDC10F2Z333 226 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 H3BUA1 57 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 BRI3O95415 125 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 METTL15P1P0C7V9 234 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 CTRB1P17538 263 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 GPX4P36969 197 aaPredicted RBP7.49□□□□□ -1.21
YBX3-215ENST00000544504 ZNF266Q14584 549 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 CTRB2Q6GPI1 263 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 ETV3LQ6ZN32 361 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 TMUB2Q71RG4 321 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 LILRB2Q8N423 598 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 C9orf62Q8N4C0 152 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 LFNGQ8NES3 379 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 CACNG8Q8WXS5 425 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 OR4C12Q96R67 309 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 P2RX4Q99571 388 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 ARPC5LQ9BPX5 153 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 HSPB9Q9BQS6 159 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 ARL6Q9H0F7 186 aa7.49□□□□□ -1.21
YBX3-215ENST00000544504 A0A1B0GW64 132 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 BCL2L11O43521 198 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 FBXO24O75426 580 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 JTBO76095 146 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 CST7O76096 145 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 IFNA5P01569 189 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 EGR2P11161 476 aaPredicted RBP7.48□□□□□ -1.21
YBX3-215ENST00000544504 AREGP15514 252 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 CXCL2P19875 107 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 BLCAPP62952 87 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 UBA52P62987 128 aaKnown RBP7.48□□□□□ -1.21
YBX3-215ENST00000544504 SLC35B1P78383 322 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 DLK1P80370 383 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 NDPQ00604 133 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 SLC38A11Q08AI6 406 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 ECSCRQ19T08 205 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 LGALSLQ3ZCW2 172 aaPredicted RBP7.48□□□□□ -1.21
YBX3-215ENST00000544504 PVRIGQ6DKI7 326 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 OR8G2PQ6IF36 304 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 TET2Q6N021 2002 aaPredicted RBP7.48□□□□□ -1.21
YBX3-215ENST00000544504 SLC25A24Q6NUK1 477 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 Q8N2B8 174 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 OR5C1Q8NGR4 320 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 OR2T6Q8NHC8 308 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 FAM103A1Q9BTL3 118 aaKnown RBP7.48□□□□□ -1.21
YBX3-215ENST00000544504 TMEM147Q9BVK8 224 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 WNT10AQ9GZT5 417 aa7.48□□□□□ -1.21
YBX3-215ENST00000544504 FAM181BA6NEQ2 426 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 MPDU1O75352 247 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 SCGB2A1O75556 95 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 NKX2-5P52952 324 aaPredicted RBP7.47□□□□□ -1.21
YBX3-215ENST00000544504 NHLH2Q02577 135 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 OPCMLQ14982 345 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 KLK9Q2XQG4 91 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 SLC51BQ86UW2 128 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 COMMD1Q8N668 190 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 TMEM217Q8N7C4 229 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 SLC35E1Q96K37 410 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 ATP5SQ99766 215 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 SLA2Q9H6Q3 261 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 ZNF702PQ9H963 129 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 ESM1Q9NQ30 184 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 UQCC1Q9NVA1 299 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 GAR1Q9NY12 217 aaKnown RBP7.47□□□□□ -1.21
YBX3-215ENST00000544504 FBXL17Q9UF56 701 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 KLK9Q9UKQ9 250 aa7.47□□□□□ -1.21
YBX3-215ENST00000544504 SH2D7A6NKC9 451 aaPredicted RBP7.46□□□□□ -1.22
YBX3-215ENST00000544504 FAM223BA6NKX1 122 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 PMS2P5A8MQ11 134 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 SOX15O60248 233 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 REG1AP05451 166 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 APELAP0DMC3 54 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 OPRK1P41145 380 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 CD69Q07108 199 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 RAB31Q13636 194 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 C19orf54Q5BKX5 351 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 FAM209BQ5JX69 171 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 ASPHD1Q5U4P2 390 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 LAMTOR1Q6IAA8 161 aa7.46□□□□□ -1.22
YBX3-215ENST00000544504 EIF5AL1Q6IS14 154 aaKnown RBP7.46□□□□□ -1.22
YBX3-215ENST00000544504 FAM223AQ8IWN6 122 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms