RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 TMEM133Q9H2Q1 129 aa11.26□□□□□ -0.61
MSH2-206ENST00000543555 LYNX1G3V0Z9 82 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 SIAH2O43255 324 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 FOXH1O75593 365 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 LYNX1P0DP58 116 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 COL8A2P25067 703 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 MLANAQ16655 118 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 OR5T1Q8NG75 326 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 OR4P4Q8NGL7 312 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 TMEM204Q9BSN7 226 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 SRD5A3Q9H8P0 318 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 A0A1W2PN81 502 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 SCO2A0A1W2PP80 73 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 MT-CO2P00403 227 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 OR10J1P30954 320 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 CHRNA7P36544 502 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 MIR17HGQ75NE6 70 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 ST6GALNAC3Q8NDV1 305 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 SLC35E1Q96K37 410 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 ARFGEF3Q5TH69 2177 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 CGB1A6NKQ9 187 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 ACTL6BO94805 426 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 IL3RAP26951 378 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 MC5RP33032 325 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 CACNG8Q8WXS5 425 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 ZNF430Q9H8G1 570 aaPredicted RBP11.25□□□□□ -0.61
MSH2-206ENST00000543555 FUT9Q9Y231 359 aa11.25□□□□□ -0.61
MSH2-206ENST00000543555 IFITM10A6NMD0 228 aa11.24□□□□□ -0.61
MSH2-206ENST00000543555 C10orf55Q5SWW7 151 aa11.24□□□□□ -0.61
MSH2-206ENST00000543555 TRBV20OR9-2A0A075B6H5 130 aa11.24□□□□□ -0.61
MSH2-206ENST00000543555 CD99P14209 185 aa11.24□□□□□ -0.61
MSH2-206ENST00000543555 GATA2P23769 480 aaPredicted RBP11.24□□□□□ -0.61
MSH2-206ENST00000543555 GPX4P36969 197 aaPredicted RBP11.24□□□□□ -0.61
MSH2-206ENST00000543555 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
MSH2-206ENST00000543555 HLA-DRB5Q30154 266 aa11.24□□□□□ -0.61
MSH2-206ENST00000543555 ZNF114Q8NC26 417 aa11.24□□□□□ -0.61
MSH2-206ENST00000543555 AURKAIP1Q9NWT8 199 aaPredicted RBP11.24□□□□□ -0.61
MSH2-206ENST00000543555 TNCP24821 2201 aa11.24□□□□□ -0.61
MSH2-206ENST00000543555 SFTPCP11686 197 aa11.23□□□□□ -0.61
MSH2-206ENST00000543555 SRP14P37108 136 aaKnown RBP11.23□□□□□ -0.61
MSH2-206ENST00000543555 PPOXP50336 477 aa11.23□□□□□ -0.61
MSH2-206ENST00000543555 VMA21Q3ZAQ7 101 aa11.23□□□□□ -0.61
MSH2-206ENST00000543555 ZNF672Q499Z4 452 aaPredicted RBP11.23□□□□□ -0.61
MSH2-206ENST00000543555 C4orf17Q53FE4 359 aa11.23□□□□□ -0.61
MSH2-206ENST00000543555 ZNF841Q6ZN19 808 aa11.23□□□□□ -0.61
MSH2-206ENST00000543555 TNFRSF14Q92956 283 aa11.23□□□□□ -0.61
MSH2-206ENST00000543555 SLC25A17O43808 307 aa11.23□□□□□ -0.61
MSH2-206ENST00000543555 FSTL3O95633 263 aa11.23□□□□□ -0.61
MSH2-206ENST00000543555 HRNRQ86YZ3 2850 aaPredicted RBP11.22□□□□□ -0.61
MSH2-206ENST00000543555 A0A1W2PPQ1 181 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 PGPEP1LA6NFU8 196 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 PPP5D1E7EU14 171 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 GGCTO75223 188 aaKnown RBP11.22□□□□□ -0.61
MSH2-206ENST00000543555 IGHV2-70P01814 119 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 PNKDQ8N490 385 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 RITA1Q96K30 269 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 C19orf24Q9BVV8 132 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 TPSG1Q9NRR2 321 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 IGHV2-26A0A0B4J1V2 119 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 LGALS7P47929 136 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 ADORA2A-AS1P86434 159 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 CLEC12BQ2HXU8 276 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 OR2T10Q8NGZ9 312 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 OR4X1Q8NH49 305 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 OR2T6Q8NHC8 308 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 RNASEH2CQ8TDP1 164 aaKnown RBP11.22□□□□□ -0.61
MSH2-206ENST00000543555 C11orf52Q96A22 123 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 TECRQ9NZ01 308 aaKnown RBP11.22□□□□□ -0.61
MSH2-206ENST00000543555 ARL2-SNX15V9GYD0 113 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 ELOA3CA0A087WX78 387 aaPredicted RBP11.22□□□□□ -0.61
MSH2-206ENST00000543555 IGHV3-72A0A0B4J1Y9 119 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 PPP1R2P9O14990 202 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 IGLV1-47P01700 117 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 OR5G3P0C626 314 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 DLX1P56177 255 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 S100A12P80511 92 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 PSG5Q15238 335 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 KCNIP4Q6PIL6 250 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 ACY3Q96HD9 319 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 TMEM167BQ9NRX6 74 aa11.22□□□□□ -0.61
MSH2-206ENST00000543555 SVEP1Q4LDE5 3571 aa11.21□□□□□ -0.61
MSH2-206ENST00000543555 ENSAO43768 121 aaKnown RBP11.21□□□□□ -0.61
MSH2-206ENST00000543555 SUB1P53999 127 aaKnown RBP eCLIP11.21□□□□□ -0.612e-9■■■■■ 27.7
MSH2-206ENST00000543555 MRGPRG-AS1Q2M3A8 158 aa11.21□□□□□ -0.61
MSH2-206ENST00000543555 UHRF2Q96PU4 802 aa11.21□□□□□ -0.61
MSH2-206ENST00000543555 NIT2Q9NQR4 276 aa11.21□□□□□ -0.61
MSH2-206ENST00000543555 GAR1Q9NY12 217 aaKnown RBP11.21□□□□□ -0.61
MSH2-206ENST00000543555 SPG11Q96JI7 2443 aa11.21□□□□□ -0.62
MSH2-206ENST00000543555 VPS13CQ709C8 3753 aa11.21□□□□□ -0.62
MSH2-206ENST00000543555 SOD3P08294 240 aa11.21□□□□□ -0.62
MSH2-206ENST00000543555 AREGP15514 252 aa11.21□□□□□ -0.62
MSH2-206ENST00000543555 FAM3BP58499 235 aaPredicted RBP11.21□□□□□ -0.62
MSH2-206ENST00000543555 HIST3H2BBQ8N257 126 aa11.21□□□□□ -0.62
MSH2-206ENST00000543555 ZNF503Q96F45 646 aa11.21□□□□□ -0.62
MSH2-206ENST00000543555 SFRP2Q96HF1 295 aa11.21□□□□□ -0.62
MSH2-206ENST00000543555 A0A1W2PPI3 338 aa11.2□□□□□ -0.62
MSH2-206ENST00000543555 PRRX1P54821 245 aa11.2□□□□□ -0.62
MSH2-206ENST00000543555 GFI1BQ5VTD9 330 aa11.2□□□□□ -0.62
MSH2-206ENST00000543555 FNDC4Q9H6D8 234 aaPredicted RBP11.2□□□□□ -0.62
MSH2-206ENST00000543555 KMT2BQ9UMN6 2715 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms