RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 CDS2O95674 445 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 MT-CO2P00403 227 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 RPL5P46777 297 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 MEF2DQ14814 521 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 AARDQ4LEZ3 155 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 SPINK9Q5DT21 86 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 OR52B4Q8NGK2 314 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 OR4C16Q8NGL9 310 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 LHFPL5Q8TAF8 219 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 GLYATL2Q8WU03 294 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 DIRAS2Q96HU8 199 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 TXN2Q99757 166 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 NXF2Q9GZY0 626 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 COPZ2Q9P299 210 aa9.78□□□□□ -0.84
TNFRSF1A-215ENST00000543359 C15orf62A8K5M9 175 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TSPAN4O14817 238 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 IGHV3-48P01763 117 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 LYL1P12980 280 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 SCGB2B2Q4G0G5 96 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 Q56UQ5 140 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 SLC16A13Q7RTY0 426 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 CCDC71LQ8N9Z2 235 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 UBAC2Q8NBM4 344 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 OR10C1Q96KK4 312 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TMEM222Q9H0R3 208 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 RABL2AQ9UBK7 228 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 RABL2BQ9UNT1 228 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 GPR132Q9UNW8 380 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 HYDINQ4G0P3 5121 aa9.77□□□□□ -0.85
TNFRSF1A-215ENST00000543359 ZNF207O43670 478 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 GSTZ1O43708 216 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 B3GALNT1O75752 331 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 OR5AC1P0C628 307 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TNFSF8P32971 234 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 ETV6P41212 452 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 MFAP4P55083 255 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 ERHP84090 104 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 IL18Q14116 193 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 SURF2Q15527 256 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 BSXQ3C1V8 233 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 ANKRD55Q3KP44 614 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 RBPMS2Q6ZRY4 209 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 ISOC1Q96CN7 298 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 MISP3Q96FF7 219 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 SPAG8Q99932 426 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 FAM110AQ9BQ89 295 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 NAA60Q9H7X0 242 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 GAR1Q9NY12 217 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 SMPXQ9UHP9 88 aa9.76□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TEX13DA0A0J9YY54 714 aaPredicted RBP9.75□□□□□ -0.85
TNFRSF1A-215ENST00000543359 ANKRD20A5PA0PJZ0 165 aa9.75□□□□□ -0.85
TNFRSF1A-215ENST00000543359 DISC1C4P0D8 188 aa9.75□□□□□ -0.85
TNFRSF1A-215ENST00000543359 AKAIN1P0CW23 69 aa9.75□□□□□ -0.85
TNFRSF1A-215ENST00000543359 RNASE2P10153 161 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-215ENST00000543359 AKR1C2P52895 323 aa9.75□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TRIM16LQ309B1 348 aa9.75□□□□□ -0.85
TNFRSF1A-215ENST00000543359 SELENOHQ8IZQ5 122 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-215ENST00000543359 C20orf24Q9BUV8 137 aa9.75□□□□□ -0.85
TNFRSF1A-215ENST00000543359 MRPL36Q9P0J6 103 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-215ENST00000543359 IGHV7-4-1A0A0J9YVY3 117 aa9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 CRYM-AS1A6NIL9 109 aa9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 CHEK1O14757 476 aa9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 NUPL2O15504 423 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 ATG12O94817 140 aa9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 RELQ04864 619 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 ODF3L2Q3SX64 289 aa9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 ZFAND6Q6FIF0 208 aa9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 OR51S1Q8NGJ8 323 aa9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 OR52E5Q8NH55 327 aa9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TMEM230Q96A57 120 aa9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 RNF2Q99496 336 aa9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 C6orf62Q9GZU0 229 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 FNDC4Q9H6D8 234 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TMEM56-RWDD3S4R434 201 aa9.74□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TMEM50AO95807 157 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 IFNA17P01571 189 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 SNCAP37840 140 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 FAM90A2PQ658T7 463 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 LAMTOR1Q6IAA8 161 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TOMM20LQ6UXN7 152 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 FAM219AQ8IW50 185 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 LILRB2Q8N423 598 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 SLC35G3Q8N808 338 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TMEM116Q8NCL8 245 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 PINX1Q96BK5 328 aaKnown RBP9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 GPR146Q96CH1 333 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 RRNAD1Q96FB5 475 aaKnown RBP9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 PRRT1Q99946 306 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 OVOL2Q9BRP0 275 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 RHPN1-AS1Q9BWJ2 59 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 GGTLC1Q9BX51 225 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 ZFAND3Q9H8U3 227 aa9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 RSL24D1Q9UHA3 163 aaKnown RBP9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 C14orf166Q9Y224 244 aaKnown RBP9.73□□□□□ -0.85
TNFRSF1A-215ENST00000543359 LOC102724200A0A096LPH7 203 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TRAV14DV4A0A0A6YYC5 116 aa9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 FABP12A6NFH5 140 aa9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 APOHP02749 345 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 NPBWR1P48145 328 aa9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 SPCS3P61009 180 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms