RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 OR1C1Q15619 314 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 ANXA2RQ3ZCQ2 193 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 RNFT1Q5M7Z0 435 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 SH2D6Q7Z4S9 175 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 OR51H1Q8NH63 302 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 GALMQ96C23 342 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 HARBI1Q96MB7 349 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 TRBV9A0A0B4J1U6 114 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 A0A1W2PPM0 123 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 CRYGSP22914 178 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 ETDBQ3ZM63 59 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 TPRX1Q8N7U7 411 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 SPSB4Q96A44 273 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 TMEM140Q9NV12 185 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 KCNS2Q9ULS6 477 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 ZNF257Q9Y2Q1 563 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 PPYP01298 95 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 REG1AP05451 166 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 COX5AP20674 150 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 FOXE3Q13461 319 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 TBR1Q16650 682 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 SPATA46Q5T0L3 261 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 ACP7Q6ZNF0 438 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 MS4A5Q9H3V2 200 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 HSPB8Q9UJY1 196 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 TMPRSS2O15393 492 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 ACP1P24666 158 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 TMEM116Q8NCL8 245 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 C18orf32Q8TCD1 76 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 RAB40CQ96S21 281 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 IL36RNQ9UBH0 155 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 CD300LBA8K4G0 201 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 NGFP01138 241 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 PSG7Q13046 419 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 TMEM136Q6ZRR5 245 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 GAPTQ8N292 157 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 ZNF418Q8TF45 676 aaPredicted RBP9.38□□□□□ -0.91
CDH4-201ENST00000543233 Q96M66 194 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 HS3ST6Q96QI5 342 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 TNFRSF18Q9Y5U5 241 aa9.38□□□□□ -0.91
CDH4-201ENST00000543233 ZNF503-AS2A6NEH8 195 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 LSM10Q969L4 123 aaKnown RBP9.37□□□□□ -0.91
CDH4-201ENST00000543233 SPATA25Q9BR10 227 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 ZNF331Q9NQX6 463 aaPredicted RBP9.37□□□□□ -0.91
CDH4-201ENST00000543233 DECR2Q9NUI1 292 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 MTCH1Q9NZJ7 389 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 CACNG5Q9UF02 275 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 TRAV38-1A0A0B4J264 116 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 A0A0G2JRQ6 117 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 A0A1W2PPV4 95 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 SYNGR2O43760 224 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 DOLPP1Q86YN1 238 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 ZNF611Q8N823 705 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 OR52E5Q8NH55 327 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 ARPC1AQ92747 370 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 ABHD14BQ96IU4 210 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 ZNF488Q96MN9 340 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 SPAG8Q99932 426 aaPredicted RBP9.37□□□□□ -0.91
CDH4-201ENST00000543233 SCRT2Q9NQ03 307 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 DYSFO75923 2080 aa9.37□□□□□ -0.91
CDH4-201ENST00000543233 C2orf70A6NJV1 201 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 IGLV3-1P01715 115 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 HLA-DQA1P01909 254 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 SP9P0CG40 484 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 RPL8P62917 257 aaKnown RBP9.36□□□□□ -0.91
CDH4-201ENST00000543233 WFDC2Q14508 124 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 PEAR1Q5VY43 1037 aaPredicted RBP9.36□□□□□ -0.91
CDH4-201ENST00000543233 LINC00173Q6ZV60 143 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 MOB1BQ7L9L4 216 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 PCNX1Q96RV3 2341 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 TTTY12Q9BZ98 90 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 SPTA1P02549 2419 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 TRAV9-1A0A075B6T8 112 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 GNG4P50150 75 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 NMSQ5H8A3 153 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 SAMD5Q5TGI4 173 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 HES3Q5TGS1 186 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 OSR2Q8N2R0 312 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 UBALD1Q8TB05 177 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 C5orf30Q96GV9 206 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 NBASA2RRP1 2371 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 B9A039 149 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 MT-CO3P00414 261 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 AMY1AP04745 511 aa9.36□□□□□ -0.91
CDH4-201ENST00000543233 PCSK5Q92824 1860 aa9.35□□□□□ -0.91
CDH4-201ENST00000543233 ACACAQ13085 2346 aa9.35□□□□□ -0.91
CDH4-201ENST00000543233 TFF3Q07654 80 aa9.35□□□□□ -0.91
CDH4-201ENST00000543233 SRSF6Q13247 344 aaKnown RBP9.35□□□□□ -0.91
CDH4-201ENST00000543233 ZNF818PQ6ZRF7 136 aa9.35□□□□□ -0.91
CDH4-201ENST00000543233 FOXL2NBQ6ZUU3 175 aa9.35□□□□□ -0.91
CDH4-201ENST00000543233 OR10X1Q8NGY0 326 aa9.35□□□□□ -0.91
CDH4-201ENST00000543233 FAM173AQ9BQD7 235 aa9.35□□□□□ -0.91
CDH4-201ENST00000543233 NDFIP1Q9BT67 221 aa9.35□□□□□ -0.91
CDH4-201ENST00000543233 RNASE7Q9H1E1 156 aaKnown RBP9.35□□□□□ -0.91
CDH4-201ENST00000543233 ERG28Q9UKR5 140 aa9.35□□□□□ -0.91
CDH4-201ENST00000543233 SPENQ96T58 3664 aaKnown RBP9.35□□□□□ -0.91
CDH4-201ENST00000543233 hCG_38984A0A1B0GV85 526 aa9.35□□□□□ -0.91
CDH4-201ENST00000543233 K7EN84 100 aa9.35□□□□□ -0.91
CDH4-201ENST00000543233 LEPROTL1O95214 131 aa9.35□□□□□ -0.91
CDH4-201ENST00000543233 CLDN14O95500 239 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms