RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 M0R2P5 195 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 MALP21145 153 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 PRSS12P56730 875 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 SIGLEC14Q08ET2 396 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 C1orf210Q8IVY1 113 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 M0R381 172 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 A0A1W2PPE3 182 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 AGFG2O95081 481 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 IGHV4-39P01824 125 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 KIAA1549Q9HCM3 1950 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 ADRA2AP08913 450 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 ZNF562Q6V9R5 426 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 DRAM1Q8N682 238 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 SCO2A0A1W2PP80 73 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 TRAV1-1A0A0B4J248 108 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 IGHV1-69-2A0A0G2JMI3 117 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 F8VVB4 439 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 F8VWA3 439 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 LILRA6Q6PI73 481 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 FAM19A2Q8N3H0 131 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 ZNF385AQ96PM9 386 aaKnown RBP16.44■□□□□ 0.22
HDAC4-215ENST00000543185 RIPPLY3P57055 190 aa16.43■□□□□ 0.22
HDAC4-215ENST00000543185 CGAP01215 116 aa16.43■□□□□ 0.22
HDAC4-215ENST00000543185 IGKV1D-16P01601 117 aa16.43■□□□□ 0.22
HDAC4-215ENST00000543185 RAMP1O60894 148 aa16.43■□□□□ 0.22
HDAC4-215ENST00000543185 ICAM4Q14773 271 aa16.43■□□□□ 0.22
HDAC4-215ENST00000543185 A0A1W2PRD5 423 aa16.43■□□□□ 0.22
HDAC4-215ENST00000543185 A0A1W2PRF3 423 aa16.43■□□□□ 0.22
HDAC4-215ENST00000543185 A0A1W2PRM7 423 aa16.43■□□□□ 0.22
HDAC4-215ENST00000543185 C1QTNF9P0C862 333 aa16.43■□□□□ 0.22
HDAC4-215ENST00000543185 CCL8P80075 99 aa16.43■□□□□ 0.22
HDAC4-215ENST00000543185 TRBV24-1A0A075B6N3 115 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 MPZP25189 248 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 RHOGP84095 191 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 ZAR1Q86SH2 424 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 NPFFR1Q9GZQ6 430 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 Q9H3A6 140 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 SPG11Q96JI7 2443 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 FOXL1Q12952 345 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 SCARF2Q96GP6 870 aaPredicted RBP16.42■□□□□ 0.22
HDAC4-215ENST00000543185 IFI27L2Q9H2X8 130 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 LAGE3Q14657 143 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 TEX45Q8NA69 505 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 SLC50A1Q9BRV3 221 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 NTN1O95631 604 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 PMS2CLQ68D20 193 aa16.42■□□□□ 0.22
HDAC4-215ENST00000543185 DUSP15Q9H1R2 295 aaPredicted RBP16.42■□□□□ 0.22
HDAC4-215ENST00000543185 IGKV3D-15A0A087WSY6 115 aa16.41■□□□□ 0.22
HDAC4-215ENST00000543185 IGKV3-15P01624 115 aa16.41■□□□□ 0.22
HDAC4-215ENST00000543185 ZNF688P0C7X2 276 aa16.41■□□□□ 0.22
HDAC4-215ENST00000543185 GTF3AQ92664 365 aaKnown RBP16.41■□□□□ 0.22
HDAC4-215ENST00000543185 LOXL4Q96JB6 756 aa16.41■□□□□ 0.22
HDAC4-215ENST00000543185 MALRD1Q5VYJ5 2156 aa16.41■□□□□ 0.22
HDAC4-215ENST00000543185 TGIF1Q15583 401 aa16.41■□□□□ 0.22
HDAC4-215ENST00000543185 PRSS53Q2L4Q9 553 aa16.41■□□□□ 0.22
HDAC4-215ENST00000543185 TMEM249Q2WGJ8 235 aa16.41■□□□□ 0.22
HDAC4-215ENST00000543185 TRAV8-1A0A0A6YYK1 113 aa16.41■□□□□ 0.22
HDAC4-215ENST00000543185 ZP1P60852 638 aa16.41■□□□□ 0.22
HDAC4-215ENST00000543185 RTN4RL2Q86UN3 420 aa16.41■□□□□ 0.22
HDAC4-215ENST00000543185 MYOD1P15172 320 aa16.4■□□□□ 0.22
HDAC4-215ENST00000543185 ZFP36L2P47974 494 aaKnown RBP16.4■□□□□ 0.22
HDAC4-215ENST00000543185 RPL23P62829 140 aaKnown RBP16.4■□□□□ 0.22
HDAC4-215ENST00000543185 TRAV21A0A0B4J279 112 aa16.4■□□□□ 0.22
HDAC4-215ENST00000543185 PLAURQ03405 335 aa16.4■□□□□ 0.22
HDAC4-215ENST00000543185 IGKV3D-11A0A0A0MRZ8 115 aa16.4■□□□□ 0.22
HDAC4-215ENST00000543185 IGKV3-11P04433 115 aa16.4■□□□□ 0.22
HDAC4-215ENST00000543185 C3AR1Q16581 482 aa16.4■□□□□ 0.22
HDAC4-215ENST00000543185 SSBP2P81877 361 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-215ENST00000543185 KLF14Q8TD94 323 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-215ENST00000543185 A0A1B0GTI1 187 aa16.4■□□□□ 0.22
HDAC4-215ENST00000543185 MOSP00540 346 aa16.4■□□□□ 0.22
HDAC4-215ENST00000543185 COL11A2P13942 1736 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-215ENST00000543185 NPIPB3Q92617 1050 aa16.4■□□□□ 0.22
HDAC4-215ENST00000543185 IGHV1-45A0A0A0MS14 117 aa16.4■□□□□ 0.22
HDAC4-215ENST00000543185 ABHD12Q8N2K0 398 aa16.4■□□□□ 0.22
HDAC4-215ENST00000543185 C19orf48Q6RUI8 117 aa16.4■□□□□ 0.22
HDAC4-215ENST00000543185 A0A1W2PRE2 83 aa16.39■□□□□ 0.21
HDAC4-215ENST00000543185 C1orf194Q5T5A4 169 aa16.39■□□□□ 0.21
HDAC4-215ENST00000543185 TMEM42Q69YG0 159 aa16.39■□□□□ 0.21
HDAC4-215ENST00000543185 PPIAL4CA0A0B4J2A2 164 aa16.39■□□□□ 0.21
HDAC4-215ENST00000543185 PPIAL4GP0DN37 164 aa16.39■□□□□ 0.21
HDAC4-215ENST00000543185 ADMP35318 185 aa16.39■□□□□ 0.21
HDAC4-215ENST00000543185 EAF1Q96JC9 268 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-215ENST00000543185 SEPSECSQ9HD40 501 aaKnown RBP16.39■□□□□ 0.21
HDAC4-215ENST00000543185 VKORC1Q9BQB6 163 aa16.39■□□□□ 0.21
HDAC4-215ENST00000543185 REG1AP05451 166 aa16.39■□□□□ 0.21
HDAC4-215ENST00000543185 TSKUQ8WUA8 353 aa16.39■□□□□ 0.21
HDAC4-215ENST00000543185 ERG28Q9UKR5 140 aa16.39■□□□□ 0.21
HDAC4-215ENST00000543185 ST6GALNAC6Q969X2 333 aa16.38■□□□□ 0.21
HDAC4-215ENST00000543185 HIST3H2BBQ8N257 126 aa16.38■□□□□ 0.21
HDAC4-215ENST00000543185 ALPK3Q96L96 1907 aa16.38■□□□□ 0.21
HDAC4-215ENST00000543185 Q6ZS52 159 aa16.38■□□□□ 0.21
HDAC4-215ENST00000543185 DEFB123Q8N688 67 aa16.38■□□□□ 0.21
HDAC4-215ENST00000543185 ST6GALNAC3Q8NDV1 305 aa16.38■□□□□ 0.21
HDAC4-215ENST00000543185 CHTOPQ9Y3Y2 248 aaKnown RBP16.38■□□□□ 0.21
HDAC4-215ENST00000543185 Q5BKY6 102 aa16.38■□□□□ 0.21
HDAC4-215ENST00000543185 DTX4Q9Y2E6 619 aa16.38■□□□□ 0.21
HDAC4-215ENST00000543185 UBE2V1Q13404 147 aa16.38■□□□□ 0.21
HDAC4-215ENST00000543185 PVRIGQ6DKI7 326 aa16.37■□□□□ 0.21
HDAC4-215ENST00000543185 DNAJC30Q96LL9 226 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms