RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 C1QL2Q7Z5L3 287 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 OR1L8Q8NGR8 309 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 FGFBP3Q8TAT2 258 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 POLDIP2Q9Y2S7 368 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 MGAQ8IWI9 3026 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 DLL1O00548 723 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 HBE1P02100 147 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 Q0VG73 95 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 TMEM178AQ8NBL3 297 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 TMEM54Q969K7 222 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 RAB37Q96AX2 223 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 FNDC10F2Z333 226 aa9.21□□□□□ -0.93
CDH3-203ENST00000542274 TM4SF5O14894 197 aa9.21□□□□□ -0.93
CDH3-203ENST00000542274 BCL2P10415 239 aa9.21□□□□□ -0.93
CDH3-203ENST00000542274 MTCP1P56278 107 aa9.21□□□□□ -0.93
CDH3-203ENST00000542274 PPP1CBP62140 327 aa9.21□□□□□ -0.93
CDH3-203ENST00000542274 QRFPP83859 136 aa9.21□□□□□ -0.93
CDH3-203ENST00000542274 OR10G7Q8NGN6 311 aa9.21□□□□□ -0.93
CDH3-203ENST00000542274 KCNS1Q96KK3 526 aa9.21□□□□□ -0.93
CDH3-203ENST00000542274 OR2D2Q9H210 308 aa9.21□□□□□ -0.93
CDH3-203ENST00000542274 KIR2DS1A0A191URI9 304 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 LOC102725191A0A1B0GVB3 256 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 NEURL1O76050 574 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 MPIG6BO95866 241 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 GPR183P32249 361 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 NDUFV3P56181 108 aaKnown RBP9.21□□□□□ -0.94
CDH3-203ENST00000542274 KIR2DS1Q14954 304 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 C3AR1Q16581 482 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 CRIP3Q6Q6R5 217 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 ZDHHC23Q8IYP9 409 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 ARPC1AQ92747 370 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 GMPPAQ96IJ6 420 aaPredicted RBP9.21□□□□□ -0.94
CDH3-203ENST00000542274 TMUB1Q9BVT8 246 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 C1orf123Q9NWV4 160 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 ZNF257Q9Y2Q1 563 aa9.21□□□□□ -0.94
CDH3-203ENST00000542274 CT45A6P0DMU7 189 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 CT45A5P0DMU8 189 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 CT45A7P0DMV0 189 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 RBM11P57052 281 aaKnown RBP9.2□□□□□ -0.94
CDH3-203ENST00000542274 OR1C1Q15619 314 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 CT45A1Q5HYN5 189 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 FAM159AQ6UWV7 190 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 ACP7Q6ZNF0 438 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 ZNF584Q8IVC4 421 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 SLC22A24Q8N4F4 322 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 CT45A3Q8NHU0 189 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 C1orf147Q96MC9 270 aaPredicted RBP9.2□□□□□ -0.94
CDH3-203ENST00000542274 SPANXA1Q9NS26 97 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 A0A1W2PS18 150 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 ZNF324O75467 553 aaPredicted RBP9.2□□□□□ -0.94
CDH3-203ENST00000542274 REG1AP05451 166 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 SPINK2P20155 84 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 C10orf128Q5T292 105 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 TRAPPC6BQ86SZ2 158 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 APC2O95996 2303 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 SPTBN4Q9H254 2564 aa9.2□□□□□ -0.94
CDH3-203ENST00000542274 CD300LBA8K4G0 201 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 FCN3O75636 299 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 OR2J3O76001 311 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 MOSP00540 346 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 SRIP30626 198 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 KIR3DS1Q14943 382 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 DUX4L9Q6RFH8 374 aaPredicted RBP9.19□□□□□ -0.94
CDH3-203ENST00000542274 TECRQ9NZ01 308 aaKnown RBP9.19□□□□□ -0.94
CDH3-203ENST00000542274 CACNA1GO43497 2377 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 SVILO95425 2214 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 FAM24AA6NFZ4 105 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 M0R135 149 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 HLA-DRB1P01911 266 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 APOA2P02652 100 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 CBLN1P23435 193 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 MAGEA5P43359 124 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 DOK3Q7L591 496 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 FAM19A2Q8N3H0 131 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 C3orf56Q8N813 242 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 GJC3Q8NFK1 279 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 C18orf32Q8TCD1 76 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 ZNF799Q96GE5 643 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 MRPL18Q9H0U6 180 aaKnown RBP9.19□□□□□ -0.94
CDH3-203ENST00000542274 SIRPDQ9H106 197 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 GNB4Q9HAV0 340 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 MCTS1Q9ULC4 181 aaKnown RBP9.19□□□□□ -0.94
CDH3-203ENST00000542274 ACACAQ13085 2346 aa9.19□□□□□ -0.94
CDH3-203ENST00000542274 TMEM14DPA8MWL7 114 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 F8W1H4 67 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 ORM1P02763 201 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 CRYGBP07316 175 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 ZNF32P17041 273 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 TMEM50BP56557 158 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 CEACAM16Q2WEN9 425 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 TMEM97Q5BJF2 176 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 ZNF439Q8NDP4 499 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 TMEM230Q96A57 120 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 AGMATQ9BSE5 352 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 SOX21Q9Y651 276 aaPredicted RBP9.18□□□□□ -0.94
CDH3-203ENST00000542274 DMXL2Q8TDJ6 3036 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 ZNF737O75373 536 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 FKBP2P26885 142 aaKnown RBP9.18□□□□□ -0.94
CDH3-203ENST00000542274 IER3P46695 156 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms