RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TATDN3Q17R31 274 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 TM4SF20Q53R12 229 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 NMSQ5H8A3 153 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 FAM209BQ5JX69 171 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 FAM219AQ8IW50 185 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 Q8N1Y9 231 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 TMEM170AQ8WVE7 144 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 DEDD2Q8WXF8 326 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 CACNG8Q8WXS5 425 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 IL22RA2Q969J5 263 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 MISP3Q96FF7 219 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 SLC25A21Q9BQT8 299 aaPredicted RBP7.37□□□□□ -1.23
YBX3-212ENST00000542002 PLEKHA3Q9HB20 300 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.37□□□□□ -1.23
YBX3-212ENST00000542002 SIGLEC8Q9NYZ4 499 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 THYN1Q9P016 225 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 MRPL36Q9P0J6 103 aaKnown RBP7.37□□□□□ -1.23
YBX3-212ENST00000542002 IGHV3OR16-8A0A075B7F1 116 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 ZNF320A2RRD8 509 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 TMEM213A2RRL7 107 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 ZNF785A8K8V0 405 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 TGOLN2O43493 480 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 NDUFB6O95139 128 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 LY86O95711 162 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 MT-CO2P00403 227 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 CBLN1P23435 193 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 SPCS3P61009 180 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 ERHP84090 104 aaKnown RBP7.36□□□□□ -1.23
YBX3-212ENST00000542002 DEFB114Q30KQ6 69 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 BSXQ3C1V8 233 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 CD300EQ496F6 205 aaPredicted RBP7.36□□□□□ -1.23
YBX3-212ENST00000542002 TMEM128Q5BJH2 165 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 TRIQKQ629K1 86 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 PLET1Q6UQ28 207 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 OR52E5Q8NH55 327 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 RNASE11Q8TAA1 199 aaKnown RBP7.36□□□□□ -1.23
YBX3-212ENST00000542002 ZNF436Q9C0F3 470 aaPredicted RBP7.36□□□□□ -1.23
YBX3-212ENST00000542002 FNDC4Q9H6D8 234 aaPredicted RBP7.36□□□□□ -1.23
YBX3-212ENST00000542002 C21orf62Q9NYP8 219 aa7.36□□□□□ -1.23
YBX3-212ENST00000542002 ZMAT5Q9UDW3 170 aaKnown RBP7.36□□□□□ -1.23
YBX3-212ENST00000542002 A0A0B4J2A0 478 aa7.35□□□□□ -1.23
YBX3-212ENST00000542002 PITX3O75364 302 aa7.35□□□□□ -1.23
YBX3-212ENST00000542002 SFT2D2O95562 160 aa7.35□□□□□ -1.23
YBX3-212ENST00000542002 FAM106AQ4KMX7 169 aa7.35□□□□□ -1.23
YBX3-212ENST00000542002 LGI3Q8N145 548 aa7.35□□□□□ -1.23
YBX3-212ENST00000542002 LRTM2Q8N967 370 aa7.35□□□□□ -1.23
YBX3-212ENST00000542002 UBAC2Q8NBM4 344 aa7.35□□□□□ -1.23
YBX3-212ENST00000542002 OR1L6Q8NGR2 347 aa7.35□□□□□ -1.23
YBX3-212ENST00000542002 PINX1Q96BK5 328 aaKnown RBP7.35□□□□□ -1.23
YBX3-212ENST00000542002 PEMTQ9UBM1 199 aa7.35□□□□□ -1.23
YBX3-212ENST00000542002 MLXQ9UH92 298 aa7.35□□□□□ -1.23
YBX3-212ENST00000542002 SHPKQ9UHJ6 478 aa7.35□□□□□ -1.23
YBX3-212ENST00000542002 HUWE1Q7Z6Z7 4374 aaKnown RBP7.34□□□□□ -1.23
YBX3-212ENST00000542002 COL7A1Q02388 2944 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 NAP1L6A6NFF2 107 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 A8MWP6 167 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 CYB5BO43169 146 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 C8orf88P0DMB2 117 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 SULT1A3P0DMM9 295 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 SULT1A4P0DMN0 295 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 ANXA7P20073 488 aaKnown RBP7.34□□□□□ -1.23
YBX3-212ENST00000542002 VAMP1P23763 118 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 FCGR2BP31994 310 aaPredicted RBP7.34□□□□□ -1.23
YBX3-212ENST00000542002 SNCAP37840 140 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 INPP1P49441 399 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 HOXA1P49639 335 aaPredicted RBP7.34□□□□□ -1.23
YBX3-212ENST00000542002 RBMS2Q15434 407 aaKnown RBP7.34□□□□□ -1.23
YBX3-212ENST00000542002 Q56UQ5 140 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 CENPSQ8N2Z9 138 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 UXS1Q8NBZ7 420 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 BSCL2Q96G97 398 aaPredicted RBP7.34□□□□□ -1.23
YBX3-212ENST00000542002 B9D2Q9BPU9 175 aa7.34□□□□□ -1.23
YBX3-212ENST00000542002 A0A1B0GU03 582 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 C9orf170A2RU37 121 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 MPTX1A8MV57 137 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 ZNF207O43670 478 aaKnown RBP7.33□□□□□ -1.24
YBX3-212ENST00000542002 ANXA3P12429 323 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 MFAP4P55083 255 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 IFITM3Q01628 133 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 TNFRSF9Q07011 255 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 SMCO1Q147U7 214 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 SPSB3Q6PJ21 355 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 TMEM190Q8WZ59 177 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 WDR89Q96FK6 387 aaPredicted RBP7.33□□□□□ -1.24
YBX3-212ENST00000542002 ATP6V0BQ99437 205 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 TXN2Q99757 166 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 ASCL2Q99929 193 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 PDCD10Q9BUL8 212 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 RBKSQ9H477 322 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 HEYLQ9NQ87 328 aaPredicted RBP7.33□□□□□ -1.24
YBX3-212ENST00000542002 HSPB7Q9UBY9 170 aa7.33□□□□□ -1.24
YBX3-212ENST00000542002 CEBPZOSA8MTT3 80 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 NDUFA4O00483 81 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 LYRM1O43325 122 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 ADAP1O75689 374 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 TMEM50AO95807 157 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 HOXB5P09067 269 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 OR4E1P0C645 316 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 SRPXP78539 464 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 DHRS2Q13268 280 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms