RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 MMP23AO75900 390 aa13.96□□□□□ -0.17
SPIDR-227ENST00000541342 HIVEP3Q5T1R4 2406 aa13.96□□□□□ -0.17
SPIDR-227ENST00000541342 LYPD2Q6UXB3 125 aa13.96□□□□□ -0.18
SPIDR-227ENST00000541342 CMTM2Q8TAZ6 248 aa13.96□□□□□ -0.18
SPIDR-227ENST00000541342 C11orf52Q96A22 123 aa13.96□□□□□ -0.18
SPIDR-227ENST00000541342 CHODLQ9H9P2 273 aa13.96□□□□□ -0.18
SPIDR-227ENST00000541342 NKX6-3A6NJ46 265 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 ZNF672Q499Z4 452 aaPredicted RBP13.95□□□□□ -0.18
SPIDR-227ENST00000541342 CORO2AQ92828 525 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 NPVFQ9HCQ7 196 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 IL36BQ9NZH7 164 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 SLC25A10Q9UBX3 287 aaPredicted RBP13.95□□□□□ -0.18
SPIDR-227ENST00000541342 MYOD1P15172 320 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 RAB4AP20338 218 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 CT45A1Q5HYN5 189 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 CT45A3Q8NHU0 189 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 LINC00574Q9H8X3 128 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 C15orf61A6NNL5 157 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 OR10J1P30954 320 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 TPTE2P1Q5T6R2 138 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 MUC15Q8N387 334 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 TBX15Q96SF7 602 aa13.95□□□□□ -0.18
SPIDR-227ENST00000541342 SERF1AO75920 110 aa13.94□□□□□ -0.18
SPIDR-227ENST00000541342 ESDP10768 282 aa13.94□□□□□ -0.18
SPIDR-227ENST00000541342 LGALS4P56470 323 aa13.94□□□□□ -0.18
SPIDR-227ENST00000541342 ERVK-16P61578 105 aa13.94□□□□□ -0.18
SPIDR-227ENST00000541342 S1PR3Q99500 378 aa13.94□□□□□ -0.18
SPIDR-227ENST00000541342 ZNF90Q03938 601 aa13.94□□□□□ -0.18
SPIDR-227ENST00000541342 MRPL18Q9H0U6 180 aaKnown RBP13.94□□□□□ -0.18
SPIDR-227ENST00000541342 IGHV1-69-2A0A0G2JMI3 117 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 CDKN1AP38936 164 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 PRR20EP86478 221 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 PRR20CP86479 221 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 PRR20DP86480 221 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 PRR20BP86481 221 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 PRR20AP86496 221 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 OR5I1Q13606 314 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 TEPPQ6URK8 271 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 ZNF439Q8NDP4 499 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 FAM216AQ8WUB2 273 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 TMEM14BQ9NUH8 114 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 IDI2-AS1Q9NZ38 188 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 CTSZQ9UBR2 303 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 ABCA4P78363 2273 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 EAF1Q96JC9 268 aaPredicted RBP13.93□□□□□ -0.18
SPIDR-227ENST00000541342 RNF114Q9Y508 228 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 V9GYV3 84 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 C9JCJ5 164 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 IGFBP2P18065 325 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 OR4A47Q6IF82 309 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 FAM122AQ96E09 287 aa13.93□□□□□ -0.18
SPIDR-227ENST00000541342 ITGB1BP1O14713 200 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 CA2P00918 260 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 LINC00869P0C866 280 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 UQCRFS1P47985 274 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 MIR17HGQ75NE6 70 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 SLC24A4Q8NFF2 622 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 LINC00312Q9Y6C7 94 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 LYNX1G3V0Z9 82 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 LYNX1P0DP58 116 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 NPY1RP25929 384 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 RPL29P47914 159 aaKnown RBP13.92□□□□□ -0.18
SPIDR-227ENST00000541342 RHOBP62745 196 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 OR4P4Q8NGL7 312 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 RAB9BQ9NP90 201 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 SAA2-SAA4A0A096LPE2 208 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 hADV38S2A0JD32 116 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 SAA2P0DJI9 122 aaPredicted RBP13.92□□□□□ -0.18
SPIDR-227ENST00000541342 COMPP49747 757 aaPredicted RBP13.92□□□□□ -0.18
SPIDR-227ENST00000541342 TEX43Q6ZNM6 134 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 MOB3BQ86TA1 216 aa13.92□□□□□ -0.18
SPIDR-227ENST00000541342 FOXA2Q9Y261 457 aaPredicted RBP13.92□□□□□ -0.18
SPIDR-227ENST00000541342 TRAV9-1A0A075B6T8 112 aa13.91□□□□□ -0.18
SPIDR-227ENST00000541342 M0R143 59 aa13.91□□□□□ -0.18
SPIDR-227ENST00000541342 OR1L6Q8NGR2 347 aa13.91□□□□□ -0.18
SPIDR-227ENST00000541342 ZNF503Q96F45 646 aa13.91□□□□□ -0.18
SPIDR-227ENST00000541342 IGKV1OR2-108A0A075B7D4 117 aa13.91□□□□□ -0.18
SPIDR-227ENST00000541342 CRISP2P16562 243 aa13.91□□□□□ -0.18
SPIDR-227ENST00000541342 GNG10P50151 68 aa13.91□□□□□ -0.18
SPIDR-227ENST00000541342 TMEM200BQ69YZ2 307 aa13.91□□□□□ -0.18
SPIDR-227ENST00000541342 ZNRD1Q9P1U0 126 aa13.91□□□□□ -0.18
SPIDR-227ENST00000541342 RPUSD1Q9UJJ7 312 aaKnown RBP13.91□□□□□ -0.18
SPIDR-227ENST00000541342 ZNF705FA8MVS1 300 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-227ENST00000541342 ZNF705DP0CH99 300 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-227ENST00000541342 ZNF705BP0CI00 300 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-227ENST00000541342 FOSL1P15407 271 aa13.9□□□□□ -0.18
SPIDR-227ENST00000541342 CCL3L1P16619 93 aa13.9□□□□□ -0.18
SPIDR-227ENST00000541342 IER3P46695 156 aa13.9□□□□□ -0.18
SPIDR-227ENST00000541342 RAB7AP51149 207 aa13.9□□□□□ -0.18
SPIDR-227ENST00000541342 TOMM20LQ6UXN7 152 aa13.9□□□□□ -0.18
SPIDR-227ENST00000541342 MMD2Q8IY49 270 aa13.9□□□□□ -0.18
SPIDR-227ENST00000541342 OR4S2Q8NH73 311 aa13.9□□□□□ -0.18
SPIDR-227ENST00000541342 LY96Q9Y6Y9 160 aa13.9□□□□□ -0.18
SPIDR-227ENST00000541342 ACTL6BO94805 426 aa13.9□□□□□ -0.18
SPIDR-227ENST00000541342 HSPB9Q9BQS6 159 aa13.9□□□□□ -0.18
SPIDR-227ENST00000541342 AREGP15514 252 aa13.9□□□□□ -0.18
SPIDR-227ENST00000541342 HSPE1P61604 102 aaKnown RBP13.9□□□□□ -0.18
SPIDR-227ENST00000541342 MEF2CQ06413 473 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-227ENST00000541342 CFAP46Q8IYW2 2715 aa13.89□□□□□ -0.19
SPIDR-227ENST00000541342 TPPP2P59282 170 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms