RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 K7ENP7 123 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 LINC00869P0C866 280 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 GATA2P23769 480 aaPredicted RBP10.2□□□□□ -0.78
RNF4-222ENST00000541204 CRYBB3P26998 211 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 ZNF705AQ6ZN79 300 aaPredicted RBP10.2□□□□□ -0.78
RNF4-222ENST00000541204 BAGE3Q86Y29 109 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 BAGE2Q86Y30 109 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 V9GYV3 84 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 CHD8Q9HCK8 2581 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 DYSFO75923 2080 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 TACC2O95359 2948 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 G0S2P27469 103 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 RAB7AP51149 207 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 PAFAH1B2P68402 229 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 CENPWQ5EE01 88 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 NUP37Q8NFH4 326 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 FAM222BQ8WU58 562 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 SAP30LQ9HAJ7 183 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 OR51B2Q9Y5P1 312 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 TRAV9-1A0A075B6T8 112 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 HELTA6NFD8 242 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 C17orf100A8MU93 164 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 CGB3P0DN86 165 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 CGB7P0DN87 165 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 RAB4AP20338 218 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 GNG4P50150 75 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 MRPS11P82912 194 aaKnown RBP10.2□□□□□ -0.78
RNF4-222ENST00000541204 TPTE2P1Q5T6R2 138 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 PQLC2Q6ZP29 291 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 ST6GALNAC3Q8NDV1 305 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 RND1Q92730 232 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 NABP2Q9BQ15 211 aa10.2□□□□□ -0.78
RNF4-222ENST00000541204 RNASE7Q9H1E1 156 aaKnown RBP10.2□□□□□ -0.78
RNF4-222ENST00000541204 RAI1Q7Z5J4 1906 aaPredicted RBP10.19□□□□□ -0.78
RNF4-222ENST00000541204 CCL3L1P16619 93 aa10.19□□□□□ -0.78
RNF4-222ENST00000541204 SLC35B1P78383 322 aa10.19□□□□□ -0.78
RNF4-222ENST00000541204 ZNF788Q6ZQV5 615 aa10.19□□□□□ -0.78
RNF4-222ENST00000541204 OR5AU1Q8NGC0 362 aa10.19□□□□□ -0.78
RNF4-222ENST00000541204 H1FXQ92522 213 aaKnown RBP10.19□□□□□ -0.78
RNF4-222ENST00000541204 IGKV1OR2-108A0A075B7D4 117 aa10.19□□□□□ -0.78
RNF4-222ENST00000541204 J3QR06 171 aa10.19□□□□□ -0.78
RNF4-222ENST00000541204 ESDP10768 282 aa10.19□□□□□ -0.78
RNF4-222ENST00000541204 RANP62826 216 aaKnown RBP10.19□□□□□ -0.78
RNF4-222ENST00000541204 FXYD3Q14802 87 aa10.19□□□□□ -0.78
RNF4-222ENST00000541204 VN1R17PQ8TDU5 208 aa10.19□□□□□ -0.78
RNF4-222ENST00000541204 SAMD10Q9BYL1 202 aa10.19□□□□□ -0.78
RNF4-222ENST00000541204 PAM16Q9Y3D7 125 aa10.19□□□□□ -0.78
RNF4-222ENST00000541204 LY96Q9Y6Y9 160 aa10.19□□□□□ -0.78
RNF4-222ENST00000541204 OR7C2O60412 319 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 OR10J4P0C629 311 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 FOSL1P15407 271 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 AREGP15514 252 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 TNFRSF1AP19438 455 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 MLANAQ16655 118 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 ZNF503Q96F45 646 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 SLC25A10Q9UBX3 287 aaPredicted RBP10.18□□□□□ -0.78
RNF4-222ENST00000541204 SLC45A2Q9UMX9 530 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 TNCP24821 2201 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 IGKV1-16P04430 117 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 TEX43Q6ZNM6 134 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 FAM103A1Q9BTL3 118 aaKnown RBP10.18□□□□□ -0.78
RNF4-222ENST00000541204 PLEKHA3Q9HB20 300 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 RAXQ9Y2V3 346 aa10.18□□□□□ -0.78
RNF4-222ENST00000541204 REG1BP48304 166 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 TCL1AP56279 114 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 KIAA1644Q3SXP7 199 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 LYPD2Q6UXB3 125 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 CORO2AQ92828 525 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 GNB4Q9HAV0 340 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 DYNLRB1Q9NP97 96 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 TMEM167BQ9NRX6 74 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 NAT8BQ9UHF3 227 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 RNF114Q9Y508 228 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 DSCAML1Q8TD84 2053 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 NCOR2Q9Y618 2525 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 FAM90A27PA6NNH2 459 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 SRRM4A7MD48 611 aaKnown RBP10.17□□□□□ -0.78
RNF4-222ENST00000541204 GGTLC3B5MD39 225 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 CASP6P55212 293 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 LINC01560Q8TB33 94 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 GNB1LQ9BYB4 327 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 SSUH2Q9Y2M2 353 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 ZNF835Q9Y2P0 537 aa10.17□□□□□ -0.78
RNF4-222ENST00000541204 ITGB1BP1O14713 200 aa10.16□□□□□ -0.78
RNF4-222ENST00000541204 FCN3O75636 299 aa10.16□□□□□ -0.78
RNF4-222ENST00000541204 GRNP28799 593 aaKnown RBP10.16□□□□□ -0.78
RNF4-222ENST00000541204 PRB3Q04118 309 aaPredicted RBP10.16□□□□□ -0.78
RNF4-222ENST00000541204 Q0VG73 95 aa10.16□□□□□ -0.78
RNF4-222ENST00000541204 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.16□□□□□ -0.78
RNF4-222ENST00000541204 DCHS2Q6V1P9 2916 aa10.16□□□□□ -0.78
RNF4-222ENST00000541204 NKX6-3A6NJ46 265 aa10.16□□□□□ -0.78
RNF4-222ENST00000541204 SUMO1P63165 101 aaKnown RBP10.16□□□□□ -0.78
RNF4-222ENST00000541204 CX3CL1P78423 397 aa10.16□□□□□ -0.78
RNF4-222ENST00000541204 PRCDQ00LT1 54 aa10.16□□□□□ -0.78
RNF4-222ENST00000541204 ASPHD1Q5U4P2 390 aa10.16□□□□□ -0.78
RNF4-222ENST00000541204 ZNF439Q8NDP4 499 aa10.16□□□□□ -0.78
RNF4-222ENST00000541204 TECRQ9NZ01 308 aaKnown RBP10.16□□□□□ -0.78
RNF4-222ENST00000541204 JKAMPQ9P055 326 aa10.16□□□□□ -0.78
RNF4-222ENST00000541204 PRNDQ9UKY0 176 aa10.16□□□□□ -0.78
RNF4-222ENST00000541204 ABCA4P78363 2273 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms