RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 MCRIP2Q9BUT9 160 aaKnown RBP8.46□□□□□ -1.05
CDC42SE1-207ENST00000540998 PLEKHA3Q9HB20 300 aa8.46□□□□□ -1.05
CDC42SE1-207ENST00000540998 MED13LQ71F56 2210 aa8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 APC2O95996 2303 aa8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 TRGV10A0A0A0MS01 117 aa8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 HINT1P49773 126 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 CAMPP49913 170 aa8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 RANP62826 216 aaKnown RBP8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 PAFAH1B2P68402 229 aa8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 PEAR1Q5VY43 1037 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 INO80CQ6PI98 192 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 Q6ZN92 141 aa8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 NIT1Q86X76 327 aa8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 OR52E5Q8NH55 327 aa8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 SFXN3Q9BWM7 321 aa8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 ENY2Q9NPA8 101 aa8.46□□□□□ -1.06
CDC42SE1-207ENST00000540998 IGHV3-21A0A0B4J1V1 117 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 J3QR06 171 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 M0R1B8 84 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 NDUFB8O95169 186 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 CHRNB4P30926 498 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 RAB7AP51149 207 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 DLX1P56177 255 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 HSPE1P61604 102 aaKnown RBP8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 RPP30P78346 268 aaKnown RBP8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 MRPS11P82912 194 aaKnown RBP8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 IBA57Q5T440 356 aaKnown RBP8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 C22orf34Q6ZV56 151 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 SPATA12Q7Z6I5 190 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 FDCSPQ8NFU4 85 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 CCL13Q99616 98 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 TXN2Q99757 166 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 ASCL2Q99929 193 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 ZNF586Q9NXT0 402 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 TECRQ9NZ01 308 aaKnown RBP8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 SIAH2O43255 324 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 HYPMO75409 117 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 REG1AP05451 166 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 RPL8P62917 257 aaKnown RBP8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 DIAPH2-AS1Q14236 149 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 OR4S2Q8NH73 311 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 DNAJC4Q9NNZ3 241 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 SLC45A2Q9UMX9 530 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 SRRM5B3KS81 715 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 TMPRSS3P57727 454 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 CX3CL1P78423 397 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 UNQ5815/PRO19632Q6UWF5 114 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 TSKUQ8WUA8 353 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 C11orf52Q96A22 123 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 TMEM14BQ9NUH8 114 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 CLEC5AQ9NY25 188 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 MRPL36Q9P0J6 103 aaKnown RBP8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 JPT1Q9UK76 154 aa8.45□□□□□ -1.06
CDC42SE1-207ENST00000540998 MGST3O14880 152 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 TOX4O94842 621 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 TMEM249Q2WGJ8 235 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 TIGITQ495A1 244 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 AARDQ4LEZ3 155 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 Q56UQ5 140 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 USF1P22415 310 aaPredicted RBP8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 CTRLP40313 264 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 TNXAQ16473 311 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 C1orf174Q8IYL3 243 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 NEUROG1Q92886 237 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 KCNS1Q96KK3 526 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 RBM14Q96PK6 669 aaKnown RBP8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 CLEC7AQ9BXN2 247 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 IL19Q9UHD0 177 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 TIMM8BQ9Y5J9 83 aaPredicted RBP8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 ABCA4P78363 2273 aa8.44□□□□□ -1.06
CDC42SE1-207ENST00000540998 VWC2LB2RUY7 222 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 C21orf140B9A014 251 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 C9JCJ5 164 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 ZNF324O75467 553 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 CD59P13987 128 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 AREGP15514 252 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 MFAP2P55001 183 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 UBE2L3P68036 154 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 Q0VG73 95 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 TRAT1Q6PIZ9 186 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 TCTEX1D1Q8N7M0 179 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 ZPBPQ9BS86 351 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 ZGRF1Q86YA3 2104 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 ESDP10768 282 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 FOXA3P55318 350 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 LINC00173Q6ZV60 143 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 GNB1LQ9BYB4 327 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 ZFHX2Q9C0A1 2572 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 TEX50A0A1B0GTY4 177 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 ISLRO14498 428 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 SAA1P0DJI8 122 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 CT45A6P0DMU7 189 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 CT45A5P0DMU8 189 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 CT45A7P0DMV0 189 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 RAB31Q13636 194 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 LEMD1Q68G75 181 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 RNASEKQ6P5S7 137 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 ZNF841Q6ZN19 808 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 UBALD2Q8IYN6 164 aa8.43□□□□□ -1.06
CDC42SE1-207ENST00000540998 BLNKQ8WV28 456 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms