RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 MXRA5Q9NR99 2828 aa19.46■□□□□ 0.71
TTC3-225ENST00000540756 IGKV1OR2-108A0A075B7D4 117 aa19.46■□□□□ 0.71
TTC3-225ENST00000540756 SH2D7A6NKC9 451 aaPredicted RBP19.46■□□□□ 0.71
TTC3-225ENST00000540756 SERF2P84101 59 aa19.46■□□□□ 0.71
TTC3-225ENST00000540756 CD69Q07108 199 aa19.46■□□□□ 0.71
TTC3-225ENST00000540756 ZNF726P1Q15940 193 aa19.46■□□□□ 0.71
TTC3-225ENST00000540756 CIARTQ8N365 385 aaPredicted RBP19.46■□□□□ 0.71
TTC3-225ENST00000540756 TLN2Q9Y4G6 2542 aa19.46■□□□□ 0.71
TTC3-225ENST00000540756 ATP5IP56385 69 aaPredicted RBP19.46■□□□□ 0.71
TTC3-225ENST00000540756 CCL20P78556 96 aa19.46■□□□□ 0.71
TTC3-225ENST00000540756 TOR2AQ5JU69 321 aa19.46■□□□□ 0.71
TTC3-225ENST00000540756 MRPL36Q9P0J6 103 aaKnown RBP19.46■□□□□ 0.71
TTC3-225ENST00000540756 FLNAP21333 2647 aaKnown RBP19.45■□□□□ 0.7
TTC3-225ENST00000540756 GCSAMLQ5JQS6 135 aa19.45■□□□□ 0.7
TTC3-225ENST00000540756 FFAR4Q5NUL3 377 aa19.45■□□□□ 0.7
TTC3-225ENST00000540756 ABHD5Q8WTS1 349 aa19.45■□□□□ 0.7
TTC3-225ENST00000540756 TMEM231Q9H6L2 316 aa19.45■□□□□ 0.7
TTC3-225ENST00000540756 IGHV3-21A0A0B4J1V1 117 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 OPRK1P41145 380 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 SPSB3Q6PJ21 355 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 ZNF562Q6V9R5 426 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 ZNF709Q8N972 641 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 C22orf15Q8WYQ4 148 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 GGTLC1Q9BX51 225 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 MEGF9Q9H1U4 602 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 FAM96BQ9Y3D0 163 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 MDFIC2A0A1B0GVS7 189 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 TSPAN15O95858 294 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 SUB1P53999 127 aaKnown RBP eCLIP19.44■□□□□ 0.7
TTC3-225ENST00000540756 MIC13Q5XKP0 118 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 TEPPQ6URK8 271 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 SLC16A13Q7RTY0 426 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 RPP25LQ8N5L8 163 aaKnown RBP19.44■□□□□ 0.7
TTC3-225ENST00000540756 EIF4E3Q8N5X7 224 aaKnown RBP19.44■□□□□ 0.7
TTC3-225ENST00000540756 MISP3Q96FF7 219 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 SSX3Q99909 188 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 HSPB9Q9BQS6 159 aa19.44■□□□□ 0.7
TTC3-225ENST00000540756 IGHV7-81A0A0B4J1V7 117 aa19.43■□□□□ 0.7
TTC3-225ENST00000540756 H2AFB1P0C5Y9 115 aa19.43■□□□□ 0.7
TTC3-225ENST00000540756 TMEM41BQ5BJD5 291 aa19.43■□□□□ 0.7
TTC3-225ENST00000540756 ASPHD1Q5U4P2 390 aa19.43■□□□□ 0.7
TTC3-225ENST00000540756 BCL6BQ8N143 479 aaPredicted RBP19.43■□□□□ 0.7
TTC3-225ENST00000540756 ZNF114Q8NC26 417 aa19.43■□□□□ 0.7
TTC3-225ENST00000540756 SFT2D1Q8WV19 159 aa19.43■□□□□ 0.7
TTC3-225ENST00000540756 ACY3Q96HD9 319 aa19.42■□□□□ 0.7
TTC3-225ENST00000540756 RCC1LQ96I51 464 aaKnown RBP19.42■□□□□ 0.7
TTC3-225ENST00000540756 F11RQ9Y624 299 aaKnown RBP19.42■□□□□ 0.7
TTC3-225ENST00000540756 PVRIGQ6DKI7 326 aa19.42■□□□□ 0.7
TTC3-225ENST00000540756 RNASEH2CQ8TDP1 164 aaKnown RBP19.42■□□□□ 0.7
TTC3-225ENST00000540756 ARPC1AQ92747 370 aa19.42■□□□□ 0.7
TTC3-225ENST00000540756 LINC00052Q96N35 136 aa19.42■□□□□ 0.7
TTC3-225ENST00000540756 C17orf112F2Z3M2 114 aa19.41■□□□□ 0.7
TTC3-225ENST00000540756 MPDU1O75352 247 aa19.41■□□□□ 0.7
TTC3-225ENST00000540756 EGR2P11161 476 aaPredicted RBP19.41■□□□□ 0.7
TTC3-225ENST00000540756 IL34Q6ZMJ4 242 aa19.41■□□□□ 0.7
TTC3-225ENST00000540756 TMEM144Q7Z5S9 345 aa19.41■□□□□ 0.7
TTC3-225ENST00000540756 OR1P1Q8NH06 330 aa19.41■□□□□ 0.7
TTC3-225ENST00000540756 WNT10AQ9GZT5 417 aa19.41■□□□□ 0.7
TTC3-225ENST00000540756 C1RLQ9NZP8 487 aa19.41■□□□□ 0.7
TTC3-225ENST00000540756 HMGB3O15347 200 aaKnown RBP19.41■□□□□ 0.7
TTC3-225ENST00000540756 YIF1AO95070 293 aa19.41■□□□□ 0.7
TTC3-225ENST00000540756 LY6EQ16553 131 aa19.41■□□□□ 0.7
TTC3-225ENST00000540756 LCN15Q6UWW0 184 aa19.41■□□□□ 0.7
TTC3-225ENST00000540756 MRPL41Q8IXM3 137 aaKnown RBP19.41■□□□□ 0.7
TTC3-225ENST00000540756 BPIFCQ8NFQ6 507 aa19.41■□□□□ 0.7
TTC3-225ENST00000540756 RAB19A4D1S5 217 aa19.4■□□□□ 0.7
TTC3-225ENST00000540756 LINC01548A6NM66 108 aa19.4■□□□□ 0.7
TTC3-225ENST00000540756 FNDC10F2Z333 226 aa19.4■□□□□ 0.7
TTC3-225ENST00000540756 CTRB1P17538 263 aa19.4■□□□□ 0.7
TTC3-225ENST00000540756 GATA2P23769 480 aaPredicted RBP19.4■□□□□ 0.7
TTC3-225ENST00000540756 GPX4P36969 197 aaPredicted RBP19.4■□□□□ 0.7
TTC3-225ENST00000540756 FGF8P55075 233 aaPredicted RBP19.4■□□□□ 0.7
TTC3-225ENST00000540756 CTRB2Q6GPI1 263 aa19.4■□□□□ 0.7
TTC3-225ENST00000540756 DPPA3Q6W0C5 159 aa19.4■□□□□ 0.7
TTC3-225ENST00000540756 RASL11BQ9BPW5 248 aa19.4■□□□□ 0.7
TTC3-225ENST00000540756 SLC25A33Q9BSK2 321 aa19.4■□□□□ 0.7
TTC3-225ENST00000540756 PXMP4Q9Y6I8 212 aa19.4■□□□□ 0.7
TTC3-225ENST00000540756 J3QLI3 93 aa19.39■□□□□ 0.69
TTC3-225ENST00000540756 OR10G4Q8NGN3 311 aa19.39■□□□□ 0.69
TTC3-225ENST00000540756 OR10G9Q8NGN4 311 aa19.39■□□□□ 0.69
TTC3-225ENST00000540756 OR10G7Q8NGN6 311 aa19.39■□□□□ 0.69
TTC3-225ENST00000540756 CACNG8Q8WXS5 425 aa19.39■□□□□ 0.69
TTC3-225ENST00000540756 NPIPB3Q92617 1050 aa19.39■□□□□ 0.69
TTC3-225ENST00000540756 SLC25A22Q9H936 323 aa19.39■□□□□ 0.69
TTC3-225ENST00000540756 H3BUX3 64 aa19.39■□□□□ 0.69
TTC3-225ENST00000540756 LFNGQ8NES3 379 aa19.39■□□□□ 0.69
TTC3-225ENST00000540756 SCRT1Q9BWW7 348 aa19.39■□□□□ 0.69
TTC3-225ENST00000540756 SMAD7O15105 426 aaKnown RBP19.38■□□□□ 0.69
TTC3-225ENST00000540756 HLA-DRB1P01911 266 aa19.38■□□□□ 0.69
TTC3-225ENST00000540756 FBP1P09467 338 aa19.38■□□□□ 0.69
TTC3-225ENST00000540756 STPG3Q8N7X2 389 aa19.38■□□□□ 0.69
TTC3-225ENST00000540756 C5orf56Q8N8D9 126 aa19.38■□□□□ 0.69
TTC3-225ENST00000540756 SLC35E1Q96K37 410 aa19.38■□□□□ 0.69
TTC3-225ENST00000540756 RBM14Q96PK6 669 aaKnown RBP19.38■□□□□ 0.69
TTC3-225ENST00000540756 C9JQL5 133 aa19.37■□□□□ 0.69
TTC3-225ENST00000540756 AMY1AP04745 511 aa19.37■□□□□ 0.69
TTC3-225ENST00000540756 OR10J1P30954 320 aa19.37■□□□□ 0.69
TTC3-225ENST00000540756 FAM122CQ6P4D5 195 aa19.37■□□□□ 0.69
TTC3-225ENST00000540756 SRSF8Q9BRL6 282 aaKnown RBP19.37■□□□□ 0.69
TTC3-225ENST00000540756 MT-CO2P00403 227 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms