RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 IAH1Q2TAA2 248 aaPredicted RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 AADACL3Q5VUY0 350 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 RPL22L1Q6P5R6 122 aaKnown RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 LYZL1Q6UWQ5 148 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 DPPA3Q6W0C5 159 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 OOSP2Q86WS3 158 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 RPS19BP1Q86WX3 136 aaKnown RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 STX12Q86Y82 276 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 CLVS1Q8IUQ0 354 aaPredicted RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 GDPD1Q8N9F7 314 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 OR10X1Q8NGY0 326 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 SLC25A40Q8TBP6 338 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 MRPL30Q8TCC3 161 aaKnown RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 GNPDA2Q8TDQ7 276 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 AP3S1Q92572 193 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 TMEM106AQ96A25 262 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 TOMM6Q96B49 74 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 NIPSNAP1Q9BPW8 284 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 SELENOSQ9BQE4 189 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 DOHHQ9BU89 302 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 XAGE1AQ9HD64 81 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 SLC39A9Q9NUM3 307 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 GID8Q9NWU2 228 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 KLK5Q9Y337 293 aaPredicted RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 UTP11Q9Y3A2 253 aaKnown RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 RBM7Q9Y580 266 aaKnown RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 ARL5AQ9Y689 179 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 TMEM56-RWDD3S4R434 201 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 THSD7AQ9UPZ6 1657 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 DCCP43146 1447 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 WRNQ14191 1432 aaPredicted RBP eCLIP0.71□□□□□ -2.3
MDM2-227ENST00000540709 MTUS2Q5JR59 1369 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 ABCC12Q96J65 1359 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 DSCAML1Q8TD84 2053 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 IGHV3-64A0A075B6Q5 118 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 TRAV7A0A075B6U4 112 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 IGHV1-18A0A0C4DH31 117 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 TRBV6-5A0A0K0K1A5 114 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 EXOC1LA0A1B0GW35 172 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 HMSDA8MTL9 139 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 OR2B3O76000 313 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 CIAO1O76071 339 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 HAND1O96004 215 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 IFNA10P01566 189 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 IGHV3-7P01780 117 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 C1QCP02747 245 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 C8GP07360 202 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 CST2P09228 141 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 RBP1P09455 135 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 TRGC1P0CF51 173 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 UBBP0CG47 229 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 PPIBP23284 216 aaKnown RBP0.7□□□□□ -2.3
MDM2-227ENST00000540709 AKR1C3P42330 323 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 GNG10P50151 68 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 SERPINB9P50453 376 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 EMP1P54849 157 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 ERVS71-1P61550 626 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 ARF6P62330 175 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 RPL19P84098 196 aaKnown RBP0.7□□□□□ -2.3
MDM2-227ENST00000540709 RUNX1Q01196 453 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 RHEBQ15382 184 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 IBA57Q5T440 356 aaKnown RBP0.7□□□□□ -2.3
MDM2-227ENST00000540709 LYRM7Q5U5X0 104 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 UNQ6190/PRO20217Q6UXQ8 127 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 AAED1Q7RTV5 226 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 SLC36A1Q7Z2H8 476 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 TMED4Q7Z7H5 227 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 KTN1-AS1Q86SY8 53 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 C1orf158Q8N1D5 194 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 TMEM86AQ8N2M4 240 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 LINC00471Q8N535 108 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 RPP25LQ8N5L8 163 aaKnown RBP0.7□□□□□ -2.3
MDM2-227ENST00000540709 ZNF439Q8NDP4 499 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 PXT1Q8NFP0 134 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 H1FXQ92522 213 aaKnown RBP0.7□□□□□ -2.3
MDM2-227ENST00000540709 DERL1Q9BUN8 251 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 OR8D2Q9GZM6 311 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 TLNRD1Q9H1K6 362 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 VCX3BQ9H321 246 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 CST9LQ9H4G1 147 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 IL20Q9NYY1 176 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 CYSLTR1Q9Y271 337 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 CCDC144AA2RUR9 1427 aa0.7□□□□□ -2.3
MDM2-227ENST00000540709 TTC21AQ8NDW8 1320 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 CHD5Q8TDI0 1954 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 E5RI56 91 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 G3V2T6 193 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 TRAPPC2LH3BP13 241 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 BANF1O75531 89 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 ATG12O94817 140 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 OR5F1O95221 314 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 NDUFC2O95298 119 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 MSMBP08118 114 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 SMIM10L2AP0DMW4 78 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 SMIM10L2BP0DMW5 78 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 PRB4P10163 310 aaPredicted RBP0.69□□□□□ -2.3
MDM2-227ENST00000540709 CCL5P13501 91 aa0.69□□□□□ -2.3
MDM2-227ENST00000540709 NFYAP23511 347 aaPredicted RBP0.69□□□□□ -2.3
MDM2-227ENST00000540709 SRP14P37108 136 aaKnown RBP0.69□□□□□ -2.3
MDM2-227ENST00000540709 EVX1P49640 407 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms