RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 IZUMO4Q1ZYL8 232 aa15.65■□□□□ 0.1
CHFR-217ENST00000540537 SCGB2B2Q4G0G5 96 aa15.65■□□□□ 0.1
CHFR-217ENST00000540537 OR13C8Q8NGS7 320 aa15.65■□□□□ 0.1
CHFR-217ENST00000540537 LOC102724200A0A096LPH7 203 aaPredicted RBP15.64■□□□□ 0.09
CHFR-217ENST00000540537 A0A0B4J293 547 aa15.64■□□□□ 0.09
CHFR-217ENST00000540537 CTSDP07339 412 aaPredicted RBP15.64■□□□□ 0.09
CHFR-217ENST00000540537 UCP1P25874 307 aa15.64■□□□□ 0.09
CHFR-217ENST00000540537 MEF2DQ14814 521 aa15.64■□□□□ 0.09
CHFR-217ENST00000540537 TRIM16LQ309B1 348 aa15.64■□□□□ 0.09
CHFR-217ENST00000540537 CLVS1Q8IUQ0 354 aaPredicted RBP15.64■□□□□ 0.09
CHFR-217ENST00000540537 RAB2BQ8WUD1 216 aa15.64■□□□□ 0.09
CHFR-217ENST00000540537 SMIM4Q8WVI0 70 aa15.64■□□□□ 0.09
CHFR-217ENST00000540537 ZNF414Q96IQ9 312 aa15.64■□□□□ 0.09
CHFR-217ENST00000540537 BCL7BQ9BQE9 202 aa15.64■□□□□ 0.09
CHFR-217ENST00000540537 IGHV3OR16-8A0A075B7F1 116 aa15.63■□□□□ 0.09
CHFR-217ENST00000540537 SPINK9Q5DT21 86 aa15.63■□□□□ 0.09
CHFR-217ENST00000540537 SLC35G3Q8N808 338 aa15.63■□□□□ 0.09
CHFR-217ENST00000540537 IL17DQ8TAD2 202 aa15.63■□□□□ 0.09
CHFR-217ENST00000540537 MARCH1Q8TCQ1 289 aa15.63■□□□□ 0.09
CHFR-217ENST00000540537 OR10C1Q96KK4 312 aa15.63■□□□□ 0.09
CHFR-217ENST00000540537 CCDC59Q9P031 241 aaKnown RBP15.63■□□□□ 0.09
CHFR-217ENST00000540537 RABL2AQ9UBK7 228 aaPredicted RBP15.63■□□□□ 0.09
CHFR-217ENST00000540537 RABL2BQ9UNT1 228 aa15.63■□□□□ 0.09
CHFR-217ENST00000540537 CTDSPLO15194 276 aa15.62■□□□□ 0.09
CHFR-217ENST00000540537 ST8SIA3O43173 380 aa15.62■□□□□ 0.09
CHFR-217ENST00000540537 ZNF207O43670 478 aaKnown RBP15.62■□□□□ 0.09
CHFR-217ENST00000540537 TMBIM6P55061 237 aa15.62■□□□□ 0.09
CHFR-217ENST00000540537 SP6Q3SY56 376 aa15.62■□□□□ 0.09
CHFR-217ENST00000540537 PDCD10Q9BUL8 212 aa15.62■□□□□ 0.09
CHFR-217ENST00000540537 NXF2Q9GZY0 626 aaKnown RBP15.62■□□□□ 0.09
CHFR-217ENST00000540537 SMPXQ9UHP9 88 aa15.62■□□□□ 0.09
CHFR-217ENST00000540537 IGHV7-4-1A0A0J9YVY3 117 aa15.61■□□□□ 0.09
CHFR-217ENST00000540537 OR4C46A6NHA9 309 aa15.61■□□□□ 0.09
CHFR-217ENST00000540537 GNG7O60262 68 aa15.61■□□□□ 0.09
CHFR-217ENST00000540537 IFNA17P01571 189 aa15.61■□□□□ 0.09
CHFR-217ENST00000540537 SNCAP37840 140 aa15.61■□□□□ 0.09
CHFR-217ENST00000540537 SURF2Q15527 256 aaPredicted RBP15.61■□□□□ 0.09
CHFR-217ENST00000540537 DYNC2LI1Q8TCX1 351 aa15.61■□□□□ 0.09
CHFR-217ENST00000540537 PINX1Q96BK5 328 aaKnown RBP15.61■□□□□ 0.09
CHFR-217ENST00000540537 RRNAD1Q96FB5 475 aaKnown RBP15.61■□□□□ 0.09
CHFR-217ENST00000540537 DIRAS2Q96HU8 199 aa15.61■□□□□ 0.09
CHFR-217ENST00000540537 C14orf166Q9Y224 244 aaKnown RBP15.61■□□□□ 0.09
CHFR-217ENST00000540537 LCE6AA0A183 80 aa15.6■□□□□ 0.09
CHFR-217ENST00000540537 DISC1C4P0D8 188 aa15.6■□□□□ 0.09
CHFR-217ENST00000540537 YIF1AO95070 293 aa15.6■□□□□ 0.09
CHFR-217ENST00000540537 IGHV3-48P01763 117 aa15.6■□□□□ 0.09
CHFR-217ENST00000540537 NPBWR1P48145 328 aa15.6■□□□□ 0.09
CHFR-217ENST00000540537 IL18Q14116 193 aa15.6■□□□□ 0.09
CHFR-217ENST00000540537 PVRIGQ6DKI7 326 aa15.6■□□□□ 0.09
CHFR-217ENST00000540537 FAAP20Q6NZ36 180 aa15.6■□□□□ 0.09
CHFR-217ENST00000540537 TMEM222Q9H0R3 208 aa15.6■□□□□ 0.09
CHFR-217ENST00000540537 UBQLN2Q9UHD9 624 aa15.6■□□□□ 0.09
CHFR-217ENST00000540537 CHEK1O14757 476 aa15.59■□□□□ 0.09
CHFR-217ENST00000540537 AKAIN1P0CW23 69 aa15.59■□□□□ 0.09
CHFR-217ENST00000540537 HOXA1P49639 335 aaPredicted RBP15.59■□□□□ 0.09
CHFR-217ENST00000540537 SUB1P53999 127 aaKnown RBP eCLIP15.59■□□□□ 0.09
CHFR-217ENST00000540537 ODF3L2Q3SX64 289 aa15.59■□□□□ 0.09
CHFR-217ENST00000540537 FAM219AQ8IW50 185 aa15.59■□□□□ 0.09
CHFR-217ENST00000540537 TMEM116Q8NCL8 245 aa15.59■□□□□ 0.09
CHFR-217ENST00000540537 DUSP18Q8NEJ0 188 aa15.59■□□□□ 0.09
CHFR-217ENST00000540537 OR4C16Q8NGL9 310 aa15.59■□□□□ 0.09
CHFR-217ENST00000540537 RNASE11Q8TAA1 199 aaKnown RBP15.59■□□□□ 0.09
CHFR-217ENST00000540537 RTBDNQ9BSG5 229 aaPredicted RBP15.59■□□□□ 0.09
CHFR-217ENST00000540537 RHPN1-AS1Q9BWJ2 59 aa15.59■□□□□ 0.09
CHFR-217ENST00000540537 A0A0G2JRQ6 117 aa15.58■□□□□ 0.08
CHFR-217ENST00000540537 CORTO00230 105 aa15.58■□□□□ 0.08
CHFR-217ENST00000540537 CDS2O95674 445 aa15.58■□□□□ 0.08
CHFR-217ENST00000540537 OR5AC1P0C628 307 aa15.58■□□□□ 0.08
CHFR-217ENST00000540537 RNASE2P10153 161 aaKnown RBP15.58■□□□□ 0.08
CHFR-217ENST00000540537 RNF2Q99496 336 aa15.58■□□□□ 0.08
CHFR-217ENST00000540537 OVOL2Q9BRP0 275 aa15.58■□□□□ 0.08
CHFR-217ENST00000540537 NAA60Q9H7X0 242 aa15.58■□□□□ 0.08
CHFR-217ENST00000540537 ENY2Q9NPA8 101 aa15.58■□□□□ 0.08
CHFR-217ENST00000540537 TRAV14DV4A0A0A6YYC5 116 aa15.57■□□□□ 0.08
CHFR-217ENST00000540537 TEX13DA0A0J9YY54 714 aaPredicted RBP15.57■□□□□ 0.08
CHFR-217ENST00000540537 ETV6P41212 452 aa15.57■□□□□ 0.08
CHFR-217ENST00000540537 APOC4P55056 127 aa15.57■□□□□ 0.08
CHFR-217ENST00000540537 DHODHQ02127 395 aa15.57■□□□□ 0.08
CHFR-217ENST00000540537 AARDQ4LEZ3 155 aa15.57■□□□□ 0.08
CHFR-217ENST00000540537 GLYATL2Q8WU03 294 aa15.57■□□□□ 0.08
CHFR-217ENST00000540537 PRRT1Q99946 306 aa15.57■□□□□ 0.08
CHFR-217ENST00000540537 GINS3Q9BRX5 216 aa15.57■□□□□ 0.08
CHFR-217ENST00000540537 GPR132Q9UNW8 380 aa15.57■□□□□ 0.08
CHFR-217ENST00000540537 GSTZ1O43708 216 aaPredicted RBP15.56■□□□□ 0.08
CHFR-217ENST00000540537 NOL3O60936 208 aaKnown RBP15.56■□□□□ 0.08
CHFR-217ENST00000540537 BMI1P35226 326 aa15.56■□□□□ 0.08
CHFR-217ENST00000540537 RPL5P46777 297 aaKnown RBP15.56■□□□□ 0.08
CHFR-217ENST00000540537 TOMM20LQ6UXN7 152 aa15.56■□□□□ 0.08
CHFR-217ENST00000540537 ZNF600Q6ZNG1 722 aa15.56■□□□□ 0.08
CHFR-217ENST00000540537 Q6ZRM9 215 aa15.56■□□□□ 0.08
CHFR-217ENST00000540537 OR52E5Q8NH55 327 aa15.56■□□□□ 0.08
CHFR-217ENST00000540537 LHFPL5Q8TAF8 219 aa15.56■□□□□ 0.08
CHFR-217ENST00000540537 RBPMSQ93062 196 aaKnown RBP15.56■□□□□ 0.08
CHFR-217ENST00000540537 C6orf62Q9GZU0 229 aaPredicted RBP15.56■□□□□ 0.08
CHFR-217ENST00000540537 RSL24D1Q9UHA3 163 aaKnown RBP15.56■□□□□ 0.08
CHFR-217ENST00000540537 DNAH1Q9P2D7 4330 aa15.55■□□□□ 0.08
CHFR-217ENST00000540537 IGHV3-49A0A0A0MS15 119 aa15.55■□□□□ 0.08
CHFR-217ENST00000540537 CRYM-AS1A6NIL9 109 aa15.55■□□□□ 0.08
CHFR-217ENST00000540537 UBE2CO00762 179 aa15.55■□□□□ 0.08
CHFR-217ENST00000540537 SPCS3P61009 180 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms