RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 NOTCH4Q99466 2003 aa6.74□□□□□ -1.33
LRP6-205ENST00000540527 PLXNB3Q9ULL4 1909 aa6.74□□□□□ -1.33
LRP6-205ENST00000540527 A0A0D9SEW6 157 aa6.73□□□□□ -1.33
LRP6-205ENST00000540527 H7C423 109 aa6.73□□□□□ -1.33
LRP6-205ENST00000540527 OR5AC1P0C628 307 aa6.73□□□□□ -1.33
LRP6-205ENST00000540527 S100A4P26447 101 aaKnown RBP6.73□□□□□ -1.33
LRP6-205ENST00000540527 CRYBB3P26998 211 aa6.73□□□□□ -1.33
LRP6-205ENST00000540527 BCL2L15Q5TBC7 163 aa6.73□□□□□ -1.33
LRP6-205ENST00000540527 FAAP20Q6NZ36 180 aa6.73□□□□□ -1.33
LRP6-205ENST00000540527 FAIMQ9NVQ4 179 aa6.73□□□□□ -1.33
LRP6-205ENST00000540527 ZNF586Q9NXT0 402 aa6.73□□□□□ -1.33
LRP6-205ENST00000540527 NUP210Q8TEM1 1887 aaPredicted RBP6.73□□□□□ -1.33
LRP6-205ENST00000540527 ZNFX1Q9P2E3 1918 aaKnown RBP6.72□□□□□ -1.33
LRP6-205ENST00000540527 NDUFAF8A1L188 74 aa6.72□□□□□ -1.33
LRP6-205ENST00000540527 M0R143 59 aa6.72□□□□□ -1.33
LRP6-205ENST00000540527 CGB3P0DN86 165 aa6.72□□□□□ -1.33
LRP6-205ENST00000540527 CGB7P0DN87 165 aa6.72□□□□□ -1.33
LRP6-205ENST00000540527 LINC00305Q7Z4B0 112 aa6.72□□□□□ -1.33
LRP6-205ENST00000540527 NR2C2APQ86WQ0 139 aa6.72□□□□□ -1.33
LRP6-205ENST00000540527 ZFAND2AQ8N6M9 145 aa6.72□□□□□ -1.33
LRP6-205ENST00000540527 STAG3L4Q8TBR4 150 aa6.72□□□□□ -1.33
LRP6-205ENST00000540527 ARHGAP31Q2M1Z3 1444 aa6.72□□□□□ -1.33
LRP6-205ENST00000540527 TRAPPC8Q9Y2L5 1435 aa6.72□□□□□ -1.33
LRP6-205ENST00000540527 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.72□□□□□ -1.33
LRP6-205ENST00000540527 HCFC1P51610 2035 aa6.72□□□□□ -1.33
LRP6-205ENST00000540527 ATG2BQ96BY7 2078 aa6.72□□□□□ -1.33
LRP6-205ENST00000540527 IGHV3-64DA0A0J9YX35 117 aa6.71□□□□□ -1.34
LRP6-205ENST00000540527 LEUTXA8MZ59 168 aa6.71□□□□□ -1.34
LRP6-205ENST00000540527 C1orf196B1AJZ1 125 aa6.71□□□□□ -1.34
LRP6-205ENST00000540527 RBFOX2O43251 390 aaKnown RBP eCLIP6.71□□□□□ -1.34
LRP6-205ENST00000540527 CFC1P0CG37 223 aa6.71□□□□□ -1.34
LRP6-205ENST00000540527 NPPCP23582 126 aa6.71□□□□□ -1.34
LRP6-205ENST00000540527 RPL22P35268 128 aaKnown RBP6.71□□□□□ -1.34
LRP6-205ENST00000540527 MRPL51Q4U2R6 128 aaKnown RBP6.71□□□□□ -1.34
LRP6-205ENST00000540527 C3orf22Q8N5N4 141 aa6.71□□□□□ -1.34
LRP6-205ENST00000540527 CIRBP-AS1Q8TBR5 109 aa6.71□□□□□ -1.34
LRP6-205ENST00000540527 TICRRQ7Z2Z1 1910 aa6.71□□□□□ -1.34
LRP6-205ENST00000540527 TCOF1Q13428 1488 aaKnown RBP6.71□□□□□ -1.34
LRP6-205ENST00000540527 IGHV1-3A0A0C4DH29 117 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 KLF18A0A0U1RQI7 1052 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 LOC100130705A0A1B0GUX0 176 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 C19orf84I3L1E1 186 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 NDUFB2O95178 105 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 IGKV2-30P06310 120 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 CD28P10747 220 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 TGFBR1P36897 503 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 RBM11P57052 281 aaKnown RBP6.7□□□□□ -1.34
LRP6-205ENST00000540527 TSPEAR-AS2P59090 65 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 YPEL3P61236 119 aaPredicted RBP6.7□□□□□ -1.34
LRP6-205ENST00000540527 LINC01554Q52M75 96 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 IFT20Q8IY31 132 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.7□□□□□ -1.34
LRP6-205ENST00000540527 MGLLQ99685 303 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 VGLL1Q99990 258 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 GRIN2AQ12879 1464 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 PHLPP1O60346 1717 aa6.7□□□□□ -1.34
LRP6-205ENST00000540527 PCNX3Q9H6A9 2034 aa6.69□□□□□ -1.34
LRP6-205ENST00000540527 TMEM223A0PJW6 202 aa6.69□□□□□ -1.34
LRP6-205ENST00000540527 ODAMA1E959 279 aa6.69□□□□□ -1.34
LRP6-205ENST00000540527 TMEM256-PLSCR3K7ERE1 68 aa6.69□□□□□ -1.34
LRP6-205ENST00000540527 NAPSAO96009 420 aa6.69□□□□□ -1.34
LRP6-205ENST00000540527 FABP2P12104 132 aa6.69□□□□□ -1.34
LRP6-205ENST00000540527 SRP14P37108 136 aaKnown RBP6.69□□□□□ -1.34
LRP6-205ENST00000540527 GNB2P62879 340 aa6.69□□□□□ -1.34
LRP6-205ENST00000540527 EIF5AP63241 154 aaKnown RBP6.69□□□□□ -1.34
LRP6-205ENST00000540527 SYCNQ0VAF6 134 aa6.69□□□□□ -1.34
LRP6-205ENST00000540527 PHF5AQ7RTV0 110 aaKnown RBP6.69□□□□□ -1.34
LRP6-205ENST00000540527 SPATA12Q7Z6I5 190 aa6.69□□□□□ -1.34
LRP6-205ENST00000540527 CD177Q8N6Q3 437 aa6.69□□□□□ -1.34
LRP6-205ENST00000540527 RHOXF1Q8NHV9 184 aa6.69□□□□□ -1.34
LRP6-205ENST00000540527 SOX21Q9Y651 276 aaPredicted RBP6.69□□□□□ -1.34
LRP6-205ENST00000540527 IFITM5A6NNB3 132 aa6.68□□□□□ -1.34
LRP6-205ENST00000540527 ZNF670-ZNF695F2Z2N8 137 aa6.68□□□□□ -1.34
LRP6-205ENST00000540527 C1QAP02745 245 aa6.68□□□□□ -1.34
LRP6-205ENST00000540527 IGHV3-30-3P0DP02 117 aa6.68□□□□□ -1.34
LRP6-205ENST00000540527 CRYGSP22914 178 aa6.68□□□□□ -1.34
LRP6-205ENST00000540527 GNG4P50150 75 aa6.68□□□□□ -1.34
LRP6-205ENST00000540527 PP6455Q8WZ26 134 aa6.68□□□□□ -1.34
LRP6-205ENST00000540527 XAGE1AQ9HD64 81 aa6.68□□□□□ -1.34
LRP6-205ENST00000540527 SLC39A9Q9NUM3 307 aa6.68□□□□□ -1.34
LRP6-205ENST00000540527 ZNRD1Q9P1U0 126 aa6.68□□□□□ -1.34
LRP6-205ENST00000540527 MYH11P35749 1972 aa6.68□□□□□ -1.34
LRP6-205ENST00000540527 IGLV3-10A0A075B6K4 115 aa6.67□□□□□ -1.34
LRP6-205ENST00000540527 A0A1W2PP18 115 aa6.67□□□□□ -1.34
LRP6-205ENST00000540527 H3BMG7 143 aa6.67□□□□□ -1.34
LRP6-205ENST00000540527 CCL25O15444 150 aa6.67□□□□□ -1.34
LRP6-205ENST00000540527 IGHV1-46P01743 117 aa6.67□□□□□ -1.34
LRP6-205ENST00000540527 GUCA1AP43080 201 aaPredicted RBP6.67□□□□□ -1.34
LRP6-205ENST00000540527 RPL27AP46776 148 aaKnown RBP6.67□□□□□ -1.34
LRP6-205ENST00000540527 UBE2BP63146 152 aa6.67□□□□□ -1.34
LRP6-205ENST00000540527 SPANXN3Q5MJ09 141 aa6.67□□□□□ -1.34
LRP6-205ENST00000540527 LDLRAD2Q5SZI1 272 aa6.67□□□□□ -1.34
LRP6-205ENST00000540527 C9orf129Q5T035 196 aaKnown RBP6.67□□□□□ -1.34
LRP6-205ENST00000540527 TRAPPC6BQ86SZ2 158 aa6.67□□□□□ -1.34
LRP6-205ENST00000540527 ZFP62Q8NB50 900 aaPredicted RBP6.67□□□□□ -1.34
LRP6-205ENST00000540527 OR8D4Q8NGM9 314 aa6.67□□□□□ -1.34
LRP6-205ENST00000540527 BRK1Q8WUW1 75 aa6.67□□□□□ -1.34
LRP6-205ENST00000540527 TMEM191AQ9H0A3 160 aa6.67□□□□□ -1.34
LRP6-205ENST00000540527 BOKQ9UMX3 212 aaPredicted RBP6.67□□□□□ -1.34
LRP6-205ENST00000540527 DOCK4Q8N1I0 1966 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms