RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 OR4F5Q8NH21 305 aa14.77□□□□□ -0.04
TNFRSF1A-213ENST00000540022 ZNF355PQ9NSJ1 428 aa14.77□□□□□ -0.04
TNFRSF1A-213ENST00000540022 PSMB11A5LHX3 300 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 RNF222A6NCQ9 220 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 ARPC5O15511 151 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 CST7O76096 145 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 IGHG4P01861 327 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 IFNA4P05014 189 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 RAB11AP62491 216 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 EWSR1Q01844 656 aaKnown RBP eCLIP14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 ARL16Q0P5N6 197 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 KLK9Q2XQG4 91 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 ETV3LQ6ZN32 361 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 CENPVQ7Z7K6 275 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 NOXA1Q86UR1 476 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 HAPLN4Q86UW8 402 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 MS4A10Q96PG2 267 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 KLK9Q9UKQ9 250 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 PRSS46E5RG02 174 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 MDKP21741 143 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 SLC35B1P78383 322 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 DEFA5Q01523 94 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 NHLH2Q02577 135 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 ZFP69Q49AA0 526 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 OR8G2PQ6IF36 304 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 OR1L6Q8NGR2 347 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 MISP3Q96FF7 219 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 BSCL2Q96G97 398 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 SLC25A31Q9H0C2 315 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 KLK15Q9H2R5 256 aa14.76□□□□□ -0.05
TNFRSF1A-213ENST00000540022 TRBV9A0A0B4J1U6 114 aa14.75□□□□□ -0.05
TNFRSF1A-213ENST00000540022 TMEM89A2RUT3 159 aa14.75□□□□□ -0.05
TNFRSF1A-213ENST00000540022 HMSDA8MTL9 139 aa14.75□□□□□ -0.05
TNFRSF1A-213ENST00000540022 OR2J3O76001 311 aa14.75□□□□□ -0.05
TNFRSF1A-213ENST00000540022 PF4V1P10720 104 aa14.75□□□□□ -0.05
TNFRSF1A-213ENST00000540022 SULT1A1P50225 295 aa14.75□□□□□ -0.05
TNFRSF1A-213ENST00000540022 LCNL1Q6ZST4 164 aa14.75□□□□□ -0.05
TNFRSF1A-213ENST00000540022 RNASEH2CQ8TDP1 164 aaKnown RBP14.75□□□□□ -0.05
TNFRSF1A-213ENST00000540022 PINX1Q96BK5 328 aaKnown RBP14.75□□□□□ -0.05
TNFRSF1A-213ENST00000540022 HYLS1Q96M11 299 aa14.75□□□□□ -0.05
TNFRSF1A-213ENST00000540022 AQP10Q96PS8 301 aa14.75□□□□□ -0.05
TNFRSF1A-213ENST00000540022 FNDC4Q9H6D8 234 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF1A-213ENST00000540022 CLPSL1A2RUU4 121 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 H3BUA1 57 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 NDUFB8O95169 186 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 BRI3O95415 125 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 HIST1H1BP16401 226 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 PSMB8P28062 276 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 RHOGP84095 191 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 MLANAQ16655 118 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 TEX38Q6PEX7 206 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 STX12Q86Y82 276 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 KLHDC1Q8N7A1 406 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 TMEM217Q8N7C4 229 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 INO80EQ8NBZ0 244 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 WIPF2Q8TF74 440 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 FBXL7Q9UJT9 491 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 RNF114Q9Y508 228 aa14.74□□□□□ -0.05
TNFRSF1A-213ENST00000540022 IGHV3-21A0A0B4J1V1 117 aa14.73□□□□□ -0.05
TNFRSF1A-213ENST00000540022 CYB5BO43169 146 aa14.73□□□□□ -0.05
TNFRSF1A-213ENST00000540022 NUP62P37198 522 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF1A-213ENST00000540022 OPRK1P41145 380 aa14.73□□□□□ -0.05
TNFRSF1A-213ENST00000540022 C12orf54Q6X4T0 127 aa14.73□□□□□ -0.05
TNFRSF1A-213ENST00000540022 OR10P1Q8NGE3 313 aa14.73□□□□□ -0.05
TNFRSF1A-213ENST00000540022 MFFQ9GZY8 342 aa14.73□□□□□ -0.05
TNFRSF1A-213ENST00000540022 ZC4H2Q9NQZ6 224 aa14.73□□□□□ -0.05
TNFRSF1A-213ENST00000540022 HSPB11Q9Y547 144 aa14.73□□□□□ -0.05
TNFRSF1A-213ENST00000540022 BOLA2-SMG1P6H3BVE0 249 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 I3L2K1 104 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 K7EIM0 57 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 CORTO00230 105 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 MT-CO2P00403 227 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 TRGV3P03979 118 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 EIF2B2P49770 351 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 RAB9AP51151 201 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 AP2S1P53680 142 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 PROK1P58294 105 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 TPPP2P59282 170 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 BAXQ07812 192 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 FOXE3Q13461 319 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 ACOT7LQ6ZUV0 252 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 OR5AU1Q8NGC0 362 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 SLA2Q9H6Q3 261 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 THYN1Q9P016 225 aa14.72□□□□□ -0.05
TNFRSF1A-213ENST00000540022 HAX1O00165 279 aa14.71□□□□□ -0.05
TNFRSF1A-213ENST00000540022 IGHV3-48P01763 117 aa14.71□□□□□ -0.05
TNFRSF1A-213ENST00000540022 ELANEP08246 267 aa14.71□□□□□ -0.05
TNFRSF1A-213ENST00000540022 CXCL2P19875 107 aa14.71□□□□□ -0.05
TNFRSF1A-213ENST00000540022 NKX2-5P52952 324 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1A-213ENST00000540022 CD69Q07108 199 aa14.71□□□□□ -0.05
TNFRSF1A-213ENST00000540022 NECAP1Q8NC96 275 aa14.71□□□□□ -0.05
TNFRSF1A-213ENST00000540022 S4R3C0 116 aa14.71□□□□□ -0.05
TNFRSF1A-213ENST00000540022 MFSD2BA6NFX1 497 aa14.71□□□□□ -0.06
TNFRSF1A-213ENST00000540022 RPLP1P05386 114 aaKnown RBP14.71□□□□□ -0.06
TNFRSF1A-213ENST00000540022 SLC38A11Q08AI6 406 aa14.71□□□□□ -0.06
TNFRSF1A-213ENST00000540022 EXOSC2Q13868 293 aaKnown RBP14.71□□□□□ -0.06
TNFRSF1A-213ENST00000540022 C15orf32Q32M92 178 aa14.71□□□□□ -0.06
TNFRSF1A-213ENST00000540022 TCTEX1D4Q5JR98 221 aa14.71□□□□□ -0.06
TNFRSF1A-213ENST00000540022 COMMD1Q8N668 190 aa14.71□□□□□ -0.06
TNFRSF1A-213ENST00000540022 RNF152Q8N8N0 203 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms