RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 TRBV9A0A0B4J1U6 114 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 NKX6-3A6NJ46 265 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 IQCF6A8MYZ5 107 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 NUDT3O95989 172 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 SAA2P0DJI9 122 aaPredicted RBP10.71□□□□□ -0.69
MSH6-210ENST00000540021 LYZP61626 148 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 WFDC8Q8IUA0 241 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 LRP4O75096 1905 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 LNP1A1A4G5 178 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 K7EN84 100 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 BMPR1BO00238 502 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 LEPROTL1O95214 131 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 RBP4P02753 201 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 CD177Q8N6Q3 437 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 OR1L4Q8NGR5 311 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 TMEM191AQ9H0A3 160 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 ZNRD1Q9P1U0 126 aa10.71□□□□□ -0.69
MSH6-210ENST00000540021 HIGD1CA8MV81 97 aa10.71□□□□□ -0.7
MSH6-210ENST00000540021 CNIH1O95406 144 aa10.71□□□□□ -0.7
MSH6-210ENST00000540021 FA2HQ7L5A8 372 aa10.71□□□□□ -0.7
MSH6-210ENST00000540021 GNB1LQ9BYB4 327 aa10.71□□□□□ -0.7
MSH6-210ENST00000540021 GSX1Q9H4S2 264 aaPredicted RBP10.71□□□□□ -0.7
MSH6-210ENST00000540021 DYNLRB1Q9NP97 96 aa10.71□□□□□ -0.7
MSH6-210ENST00000540021 ZFP30Q9Y2G7 519 aa10.71□□□□□ -0.7
MSH6-210ENST00000540021 ISLRO14498 428 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 PDLIM4P50479 330 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 NHLH1Q02575 133 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 DEFB109BQ30KR1 87 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 TPTE2P1Q5T6R2 138 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 C20orf144Q9BQM9 153 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 SPRR3Q9UBC9 169 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 KIR2DL5BA0A0G2JN68 375 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 KIR2DL5BA0A0G2JPC4 375 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 A0A1W2PS18 150 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 OR4C46A6NHA9 309 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 BTF3P20290 206 aaKnown RBP10.7□□□□□ -0.7
MSH6-210ENST00000540021 TNXAQ16473 311 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 C19orf35Q6ZS72 473 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 KIR2DL5AQ8N109 375 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 STPG4Q8N801 248 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 ADTRPQ96IZ2 230 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 LOC389332A0A1B0GUA5 103 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 C9orf172C9J069 976 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 OR5AL1P0C617 328 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 CD24P25063 80 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 TMEM177Q53S58 311 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 Q6ZR03 302 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 FAM216BQ8N7L0 139 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 OR8A1Q8NGG7 326 aa10.7□□□□□ -0.7
MSH6-210ENST00000540021 hADV38S2A0JD32 116 aa10.69□□□□□ -0.7
MSH6-210ENST00000540021 C15orf61A6NNL5 157 aa10.69□□□□□ -0.7
MSH6-210ENST00000540021 NTN3O00634 580 aaPredicted RBP10.69□□□□□ -0.7
MSH6-210ENST00000540021 BHLHA15Q7RTS1 189 aaPredicted RBP10.69□□□□□ -0.7
MSH6-210ENST00000540021 C1orf210Q8IVY1 113 aa10.69□□□□□ -0.7
MSH6-210ENST00000540021 OR1L8Q8NGR8 309 aa10.69□□□□□ -0.7
MSH6-210ENST00000540021 RAB1CQ92928 201 aa10.69□□□□□ -0.7
MSH6-210ENST00000540021 C5orf30Q96GV9 206 aa10.69□□□□□ -0.7
MSH6-210ENST00000540021 PRB3Q04118 309 aaPredicted RBP10.69□□□□□ -0.7
MSH6-210ENST00000540021 ALKBH7Q9BT30 221 aaPredicted RBP10.69□□□□□ -0.7
MSH6-210ENST00000540021 SH2D7A6NKC9 451 aaPredicted RBP10.69□□□□□ -0.7
MSH6-210ENST00000540021 NKX2-8O15522 239 aa10.69□□□□□ -0.7
MSH6-210ENST00000540021 HYPMO75409 117 aa10.69□□□□□ -0.7
MSH6-210ENST00000540021 SFTPCP11686 197 aa10.69□□□□□ -0.7
MSH6-210ENST00000540021 YPEL3P61236 119 aaPredicted RBP10.69□□□□□ -0.7
MSH6-210ENST00000540021 PRNTQ86SH4 94 aa10.69□□□□□ -0.7
MSH6-210ENST00000540021 MAP1LC3CQ9BXW4 147 aa10.69□□□□□ -0.7
MSH6-210ENST00000540021 MRPS18CQ9Y3D5 142 aaKnown RBP10.69□□□□□ -0.7
MSH6-210ENST00000540021 KRTAP27-1Q3LI81 207 aa10.68□□□□□ -0.7
MSH6-210ENST00000540021 ZNF841Q6ZN19 808 aa10.68□□□□□ -0.7
MSH6-210ENST00000540021 CLEC7AQ9BXN2 247 aa10.68□□□□□ -0.7
MSH6-210ENST00000540021 RNF7Q9UBF6 113 aa10.68□□□□□ -0.7
MSH6-210ENST00000540021 PLXNB1O43157 2135 aa10.68□□□□□ -0.7
MSH6-210ENST00000540021 TBR1Q16650 682 aa10.68□□□□□ -0.7
MSH6-210ENST00000540021 C10orf55Q5SWW7 151 aa10.68□□□□□ -0.7
MSH6-210ENST00000540021 Q6ZT83 130 aa10.68□□□□□ -0.7
MSH6-210ENST00000540021 TMEM70Q9BUB7 260 aa10.68□□□□□ -0.7
MSH6-210ENST00000540021 SLC25A17O43808 307 aa10.68□□□□□ -0.7
MSH6-210ENST00000540021 CX3CL1P78423 397 aa10.68□□□□□ -0.7
MSH6-210ENST00000540021 A0A1B0GWJ7 208 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 IZUMO1RA6ND01 250 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 PMS2P5A8MQ11 134 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 C21orf140B9A014 251 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 ERVK11-1P61568 191 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 TMEM144Q7Z5S9 345 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 MUC15Q8N387 334 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 TSKUQ8WUA8 353 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 OSTCQ9NRP0 149 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 VSTM5A8MXK1 200 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 CT45A10P0DMU9 189 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 PRRX1P54821 245 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 LINC00305Q7Z4B0 112 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 ZCCHC24Q8N2G6 241 aaKnown RBP10.67□□□□□ -0.7
MSH6-210ENST00000540021 WDR31Q8NA23 367 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 TRAV9-1A0A075B6T8 112 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 MUC21A0A0G2JKD1 596 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 MUC21A0A140T8X8 626 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 PEX7O00628 323 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 LINC00614P0C842 121 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 ZNF138P52744 262 aa10.67□□□□□ -0.7
MSH6-210ENST00000540021 RNFT1Q5M7Z0 435 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms