RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 J3QW42 95 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 COMPP49747 757 aaPredicted RBP8.33□□□□□ -1.08
TRAF1-202ENST00000540010 HIST3H2BBQ8N257 126 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 RPP25LQ8N5L8 163 aaKnown RBP8.33□□□□□ -1.08
TRAF1-202ENST00000540010 C1orf162Q8NEQ5 155 aaPredicted RBP8.33□□□□□ -1.08
TRAF1-202ENST00000540010 ZNF714Q96N38 554 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 ZNF292O60281 2723 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 SERF1AO75920 110 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 MOSP00540 346 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 LCN2P80188 198 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 SPACA3Q8IXA5 215 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 RAB37Q96AX2 223 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 HS3ST6Q96QI5 342 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 HILPDAQ9Y5L2 63 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 SNAI2O43623 268 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 SCGB1C2P0DMR2 95 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 PCSK4Q6UW60 755 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 LRTM2Q8N967 370 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 TMEM116Q8NCL8 245 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 PRR14LQ5THK1 2151 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 C16orf97H3BN30 126 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 OR4A8P0C604 315 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 NDUFAF3Q9BU61 184 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 FGF23Q9GZV9 251 aaPredicted RBP8.32□□□□□ -1.08
TRAF1-202ENST00000540010 RNASE7Q9H1E1 156 aaKnown RBP8.32□□□□□ -1.08
TRAF1-202ENST00000540010 ARFGEF3Q5TH69 2177 aa8.32□□□□□ -1.08
TRAF1-202ENST00000540010 SMIM17P0DL12 118 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 RPRMLQ8N4K4 120 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 GBGT1Q8N5D6 347 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 HSPB8Q9UJY1 196 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 YLPM1P49750 1951 aaKnown RBP8.31□□□□□ -1.08
TRAF1-202ENST00000540010 AMBPP02760 352 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 LINC00205P59089 165 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 JOSD1Q15040 202 aaPredicted RBP8.31□□□□□ -1.08
TRAF1-202ENST00000540010 C19orf35Q6ZS72 473 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 ZCCHC14Q8WYQ9 949 aaKnown RBP8.31□□□□□ -1.08
TRAF1-202ENST00000540010 KCNS1Q96KK3 526 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 JPT1Q9UK76 154 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 PRB4P10163 310 aaPredicted RBP8.31□□□□□ -1.08
TRAF1-202ENST00000540010 FOLR2P14207 255 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 GPR6P46095 362 aaPredicted RBP8.31□□□□□ -1.08
TRAF1-202ENST00000540010 PMCHL1Q16048 86 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 Q1RN00 199 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 ACP7Q6ZNF0 438 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 MIR17HGQ75NE6 70 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 C1QL4Q86Z23 238 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 WDR31Q8NA23 367 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 SRSF12Q8WXF0 261 aaKnown RBP8.31□□□□□ -1.08
TRAF1-202ENST00000540010 HIGD1AQ9Y241 93 aa8.31□□□□□ -1.08
TRAF1-202ENST00000540010 TNRC6AQ8NDV7 1962 aaKnown RBP8.31□□□□□ -1.08
TRAF1-202ENST00000540010 MBD3L4A6NDZ8 208 aaPredicted RBP8.3□□□□□ -1.08
TRAF1-202ENST00000540010 MBD3L3A6NE82 208 aaPredicted RBP8.3□□□□□ -1.08
TRAF1-202ENST00000540010 MBD3L5A6NJ08 208 aaPredicted RBP8.3□□□□□ -1.08
TRAF1-202ENST00000540010 TNFSF13O75888 250 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 TFPI2P48307 235 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 SELENOTP62341 195 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 MBD3L2Q8NHZ7 208 aaPredicted RBP8.3□□□□□ -1.08
TRAF1-202ENST00000540010 OCC1Q8TAD7 63 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 SNRNP40Q96DI7 357 aaKnown RBP8.3□□□□□ -1.08
TRAF1-202ENST00000540010 ZNF430Q9H8G1 570 aaPredicted RBP8.3□□□□□ -1.08
TRAF1-202ENST00000540010 DKK4Q9UBT3 224 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 CGB1A6NKQ9 187 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 CD3EP07766 207 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 SRSF4Q08170 494 aaKnown RBP8.3□□□□□ -1.08
TRAF1-202ENST00000540010 PRR31Q5SQ13 230 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 IL36BQ9NZH7 164 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 MUC21A0A0G2JKD1 596 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 MUC21A0A140T8X8 626 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 AMY1AP04745 511 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 MUC21Q5SSG8 566 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 FAM57AQ8TBR7 257 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 DERL1Q9BUN8 251 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 PARD6GQ9BYG4 376 aaPredicted RBP8.3□□□□□ -1.08
TRAF1-202ENST00000540010 HSPB7Q9UBY9 170 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 ARHGAP21Q5T5U3 1957 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 DMXL1Q9Y485 3027 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 A0A0G2JRQ6 117 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 DLL1O00548 723 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 CEACAM3P40198 252 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 SCGB1D4Q6XE38 83 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 Q6ZRM9 215 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 FAM216BQ8N7L0 139 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 TMEM170AQ8WVE7 144 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 LPAR2Q9HBW0 351 aa8.3□□□□□ -1.08
TRAF1-202ENST00000540010 IGHV2OR16-5A0A0B4J2B6 119 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 IQCF6A8MYZ5 107 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 K7ERU9 68 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 CA1P00915 261 aaPredicted RBP8.29□□□□□ -1.08
TRAF1-202ENST00000540010 NMSQ5H8A3 153 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 ZNF324BQ6AW86 544 aaPredicted RBP8.29□□□□□ -1.08
TRAF1-202ENST00000540010 IGHV1-18A0A0C4DH31 117 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 GAGE10A6NGK3 116 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 OR4C46A6NHA9 309 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 IGKV3-15P01624 115 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 RPL7P18124 248 aaKnown RBP8.29□□□□□ -1.08
TRAF1-202ENST00000540010 FCGR2BP31994 310 aaPredicted RBP8.29□□□□□ -1.08
TRAF1-202ENST00000540010 ADMP35318 185 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 HOXA4Q00056 320 aaPredicted RBP8.29□□□□□ -1.08
TRAF1-202ENST00000540010 PRB3Q04118 309 aaPredicted RBP8.29□□□□□ -1.08
TRAF1-202ENST00000540010 TMEM97Q5BJF2 176 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms