RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 SRRQ9GZT4 340 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 ATG5Q9H1Y0 275 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 DIABLOQ9NR28 239 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 ELF5Q9UKW6 265 aaPredicted RBP8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 A0A0A6YYH2 397 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 IGHV3-21A0A0B4J1V1 117 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 A6NJ64 397 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 SCGNO76038 276 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 CTSGP08311 255 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 FGF2P09038 288 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 OR13C7P0DN81 318 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 MIFP14174 115 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 TAS2R31P59538 309 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 WT1-ASQ06250 92 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 POU2AF1Q16633 256 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 PYDC2Q56P42 97 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 TMEM69Q5SWH9 247 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 THOC7Q6I9Y2 204 aaKnown RBP8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 HSD17B13Q7Z5P4 300 aaPredicted RBP8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 ZNF575Q86XF7 245 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 SPAG16Q8N0X2 631 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 UBAC2Q8NBM4 344 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 OR10C1Q96KK4 312 aa8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 QTRT1Q9BXR0 403 aaKnown RBP8.42□□□□□ -1.06
CLSTN3-209ENST00000539982 IGHV3-49A0A0A0MS15 119 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 TRAV14DV4A0A0A6YYC5 116 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 RBFOX2O43251 390 aaKnown RBP eCLIP8.41□□□□□ -1.062e-6■■■■□ 25.7
CLSTN3-209ENST00000539982 UPK1BO75841 260 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 DFFBO76075 338 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 HPRT1P00492 218 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 AMBPP02760 352 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 CD5P06127 495 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 TRAPPC2P0DI81 140 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 TRAPPC2BP0DI82 140 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 NQO2P16083 231 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 RELQ04864 619 aaPredicted RBP8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 CDNFQ49AH0 187 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 Q56UQ5 140 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 TMEM41BQ5BJD5 291 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 C15orf40Q8WUR7 153 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 ZNF414Q96IQ9 312 aa8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 SDHCQ99643 169 aaPredicted RBP8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 F11RQ9Y624 299 aaKnown RBP8.41□□□□□ -1.06
CLSTN3-209ENST00000539982 ELOA3CA0A087WX78 387 aaPredicted RBP8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 DEFB131BA0A096LNP1 70 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 TEX50A0A1B0GTY4 177 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 ZNF705EA8MWA4 302 aaPredicted RBP8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 K7EIM0 57 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 CTDSPLO15194 276 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 TNFSF12O43508 249 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 YIF1AO95070 293 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 GIG44P09565 113 aaPredicted RBP8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 TAS2R20P59543 309 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 DEFB131AP59861 70 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 MSMO1Q15800 293 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 HACD4Q5VWC8 232 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 LEMD1Q68G75 181 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 SNX29P2Q8IUI4 249 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 ZBTB34Q8NCN2 500 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 ABHD1Q96SE0 405 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 NDUFAF3Q9BU61 184 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 CCL28Q9NRJ3 127 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 TMEM140Q9NV12 185 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 ANXA10Q9UJ72 324 aa8.4□□□□□ -1.06
CLSTN3-209ENST00000539982 TRAV18A0A075B6X5 111 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 IGHV3OR16-13A0A075B7E8 117 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 IGHV3-74A0A0B4J1X5 117 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 DNASE2O00115 360 aaPredicted RBP8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 SULT1C2O00338 296 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 NUPL2O15504 423 aaKnown RBP8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 GSTZ1O43708 216 aaPredicted RBP8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 MRPS10P82664 201 aaKnown RBP8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 BAK1Q16611 211 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 TCF24Q7RTU0 167 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 STHQ8IWL8 128 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 DMBX1Q8NFW5 382 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 OR1L8Q8NGR8 309 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 GIMAP1Q8WWP7 306 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 MS4A6AQ9H2W1 248 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 NDUFA4L2Q9NRX3 87 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 X6R8D5 127 aa8.39□□□□□ -1.07
CLSTN3-209ENST00000539982 TRAV2A0A0B4J234 112 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 SPP1P10451 314 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 IL7P13232 177 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 IFITM3Q01628 133 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 CATR1Q13166 79 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 C12orf74Q32Q52 190 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 SOHLH1Q5JUK2 328 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 TRIQKQ629K1 86 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 MORN3Q6PF18 240 aaPredicted RBP8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 Q6ZR54 194 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 LYSMD2Q8IV50 215 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 DUSP18Q8NEJ0 188 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 SMIM4Q8WVI0 70 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 SECTM1Q8WVN6 248 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 LSM10Q969L4 123 aaKnown RBP8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 TXN2Q99757 166 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 PLEKHA2Q9HB19 425 aa8.38□□□□□ -1.07
CLSTN3-209ENST00000539982 GABARAPH6UMI1 98 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 CDK2AP2O75956 126 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 277.2 ms