RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 VMA21Q3ZAQ7 101 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 MOB3BQ86TA1 216 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 TMEM217Q8N7C4 229 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 TMEM167AQ8TBQ9 72 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 NRGNQ92686 78 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 ZDHHC16Q969W1 377 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 RNF5Q99942 180 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 HIPK2Q9H2X6 1198 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 OR51B2Q9Y5P1 312 aa13.62□□□□□ -0.23
COPS3-212ENST00000539941 OTOGQ6ZRI0 2925 aa13.61□□□□□ -0.23
COPS3-212ENST00000539941 A0A1W2PPI3 338 aa13.61□□□□□ -0.23
COPS3-212ENST00000539941 IGLV2-23P01705 113 aa13.61□□□□□ -0.23
COPS3-212ENST00000539941 VDAC2P45880 294 aaPredicted RBP13.61□□□□□ -0.23
COPS3-212ENST00000539941 KLRD1Q13241 179 aa13.61□□□□□ -0.23
COPS3-212ENST00000539941 TMEM183AQ8IXX5 376 aa13.61□□□□□ -0.23
COPS3-212ENST00000539941 OR5B3Q8NH48 314 aa13.61□□□□□ -0.23
COPS3-212ENST00000539941 TVP23CQ96ET8 276 aa13.61□□□□□ -0.23
COPS3-212ENST00000539941 OR4C12Q96R67 309 aa13.61□□□□□ -0.23
COPS3-212ENST00000539941 HIST1H2BLQ99880 126 aa13.61□□□□□ -0.23
COPS3-212ENST00000539941 PHOX2AO14813 284 aa13.6□□□□□ -0.23
COPS3-212ENST00000539941 DLEU1O43261 78 aa13.6□□□□□ -0.23
COPS3-212ENST00000539941 KRTAP10-9P60411 292 aa13.6□□□□□ -0.23
COPS3-212ENST00000539941 CCDC144NLQ6NUI1 221 aa13.6□□□□□ -0.23
COPS3-212ENST00000539941 Q8WTZ3 238 aa13.6□□□□□ -0.23
COPS3-212ENST00000539941 BEX4Q9NWD9 120 aaPredicted RBP13.6□□□□□ -0.23
COPS3-212ENST00000539941 FBXO7Q9Y3I1 522 aa13.6□□□□□ -0.23
COPS3-212ENST00000539941 TBL2Q9Y4P3 447 aaKnown RBP13.6□□□□□ -0.23
COPS3-212ENST00000539941 PUS1Q9Y606 427 aaKnown RBP eCLIP13.6□□□□□ -0.23
COPS3-212ENST00000539941 CD1BP29016 333 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 UBE2E1P51965 193 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 RPL8P62917 257 aaKnown RBP13.59□□□□□ -0.23
COPS3-212ENST00000539941 ATP6V1FQ16864 119 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 TEX45Q8NA69 505 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 PINX1Q96BK5 328 aaKnown RBP13.59□□□□□ -0.23
COPS3-212ENST00000539941 TBX15Q96SF7 602 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 ENY2Q9NPA8 101 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 HEYLQ9NQ87 328 aaPredicted RBP13.59□□□□□ -0.23
COPS3-212ENST00000539941 POLQO75417 2590 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 H3BQ15 152 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 IFNA5P01569 189 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 PRH1P02810 166 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 LGALS4P56470 323 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 PRCDQ00LT1 54 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 PAX8Q06710 450 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 PNRC1Q12796 327 aaPredicted RBP13.59□□□□□ -0.23
COPS3-212ENST00000539941 SPINK9Q5DT21 86 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 COA6Q5JTJ3 125 aaKnown RBP13.59□□□□□ -0.23
COPS3-212ENST00000539941 LDLRAD2Q5SZI1 272 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 TET2Q6N021 2002 aaPredicted RBP13.59□□□□□ -0.23
COPS3-212ENST00000539941 HAPLN4Q86UW8 402 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 OR10G4Q8NGN3 311 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 LPAR2Q9HBW0 351 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 PLA2G2EQ9NZK7 142 aa13.59□□□□□ -0.23
COPS3-212ENST00000539941 IGHV3-72A0A0B4J1Y9 119 aa13.58□□□□□ -0.24
COPS3-212ENST00000539941 HSPB1P04792 205 aaKnown RBP13.58□□□□□ -0.24
COPS3-212ENST00000539941 TRGC1P0CF51 173 aa13.58□□□□□ -0.24
COPS3-212ENST00000539941 GZMBP10144 247 aa13.58□□□□□ -0.24
COPS3-212ENST00000539941 ATP5IP56385 69 aaPredicted RBP13.58□□□□□ -0.24
COPS3-212ENST00000539941 SLC38A11Q08AI6 406 aa13.58□□□□□ -0.24
COPS3-212ENST00000539941 ARL16Q0P5N6 197 aa13.58□□□□□ -0.24
COPS3-212ENST00000539941 CLEC12BQ2HXU8 276 aa13.58□□□□□ -0.24
COPS3-212ENST00000539941 LRRC75A-AS1Q8N1F1 130 aa13.58□□□□□ -0.24
COPS3-212ENST00000539941 GNPNAT1Q96EK6 184 aaPredicted RBP13.58□□□□□ -0.24
COPS3-212ENST00000539941 FAM210BQ96KR6 192 aa13.58□□□□□ -0.24
COPS3-212ENST00000539941 NIPSNAP3BQ9BS92 247 aa13.58□□□□□ -0.24
COPS3-212ENST00000539941 PARD6GQ9BYG4 376 aaPredicted RBP13.58□□□□□ -0.24
COPS3-212ENST00000539941 COMMD5Q9GZQ3 224 aa13.58□□□□□ -0.24
COPS3-212ENST00000539941 SPG11Q96JI7 2443 aa13.58□□□□□ -0.24
COPS3-212ENST00000539941 TEX50A0A1B0GTY4 177 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 C15orf62A8K5M9 175 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 PMS2P5A8MQ11 134 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 TIMM23O14925 209 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 CYB5BO43169 146 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 OR13C7P0DN81 318 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 ZNF25P17030 456 aaPredicted RBP13.57□□□□□ -0.24
COPS3-212ENST00000539941 RND2P52198 227 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 SAPCD1Q5SSQ6 148 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 ZNF664Q8N3J9 261 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 OR10P1Q8NGE3 313 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 OR1L8Q8NGR8 309 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 PLEKHA3Q9HB20 300 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 VAX2Q9UIW0 290 aa13.57□□□□□ -0.24
COPS3-212ENST00000539941 RBFOX3A6NFN3 312 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 INS-IGF2F8WCM5 200 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 VENTXO95231 258 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 TRGC2P03986 189 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 IQCJQ1A5X6 159 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 LHFPL4Q7Z7J7 247 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 CFHR4Q92496 578 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 RBMXL1Q96E39 390 aaKnown RBP13.56□□□□□ -0.24
COPS3-212ENST00000539941 KIAA1456Q9P272 454 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 HILPDAQ9Y5L2 63 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 TRBV24-1A0A075B6N3 115 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 PPP5D1E7EU14 171 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 SLC25A17O43808 307 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 RPLP1P05386 114 aaKnown RBP13.56□□□□□ -0.24
COPS3-212ENST00000539941 CRYGBP07316 175 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 CXCL1P09341 107 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 ATP6V0CP27449 155 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 ERVFC1-1P60608 527 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms