RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 GATA2P23769 480 aaPredicted RBP7.88□□□□□ -1.15
CDH13-204ENST00000539548 GLRXP35754 106 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 AMTP48728 403 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 ZNF83P51522 516 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 PRRX1P54821 245 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 KLF3P57682 345 aaPredicted RBP7.88□□□□□ -1.15
CDH13-204ENST00000539548 SLC25A48Q6ZT89 311 aaKnown RBP7.88□□□□□ -1.15
CDH13-204ENST00000539548 FDCSPQ8NFU4 85 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 OR5B3Q8NH48 314 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 CACNG8Q8WXS5 425 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 COMMD5Q9GZQ3 224 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 LPAR2Q9HBW0 351 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 GCM1Q9NP62 436 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 SLC35D1Q9NTN3 355 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 BET1LQ9NYM9 111 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 RNF7Q9UBF6 113 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 CDC42EP3Q9UKI2 254 aa7.88□□□□□ -1.15
CDH13-204ENST00000539548 INTS1Q8N201 2190 aaKnown RBP7.88□□□□□ -1.15
CDH13-204ENST00000539548 FRYQ5TBA9 3013 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 TRAV17A0A0B4J275 112 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 PSMB11A5LHX3 300 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 A6NNC1 897 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 TM4SF5O14894 197 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 SPRY3O43610 288 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 ZNF324O75467 553 aaPredicted RBP7.87□□□□□ -1.15
CDH13-204ENST00000539548 SP9P0CG40 484 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 SRIP30626 198 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 TCL1AP56279 114 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 CD69Q07108 199 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 MLANAQ16655 118 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 FAM201AQ5SY85 155 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 STUMQ69YW2 141 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 RASL11AQ6T310 242 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 OR9G1Q8NH87 305 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 WIPF2Q8TF74 440 aaPredicted RBP7.87□□□□□ -1.15
CDH13-204ENST00000539548 FAM167A-AS1Q96KT0 104 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 RCHY1Q96PM5 261 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 URB1O60287 2271 aaKnown RBP7.87□□□□□ -1.15
CDH13-204ENST00000539548 IGLV3-9A0A075B6K5 115 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 NKX2-8O15522 239 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 APCSP02743 223 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 IGKV1-16P04430 117 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 MGST1P10620 155 aaKnown RBP7.87□□□□□ -1.15
CDH13-204ENST00000539548 GNG10P50151 68 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 SLC35B1P78383 322 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 C3orf36Q3SXR2 165 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 MRPL54Q6P161 138 aaKnown RBP7.87□□□□□ -1.15
CDH13-204ENST00000539548 C19orf35Q6ZS72 473 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 FAM231DQ6ZW35 169 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 NIT1Q86X76 327 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 GAFA1Q96PS6 74 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 SLC25A2Q9BXI2 301 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 DNAJC4Q9NNZ3 241 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 ZNF331Q9NQX6 463 aaPredicted RBP7.87□□□□□ -1.15
CDH13-204ENST00000539548 SERTAD4Q9NUC0 356 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 PPP1R14DQ9NXH3 145 aa7.87□□□□□ -1.15
CDH13-204ENST00000539548 RPUSD1Q9UJJ7 312 aaKnown RBP7.87□□□□□ -1.15
CDH13-204ENST00000539548 PCNX2A6NKB5 2137 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 RAI1Q7Z5J4 1906 aaPredicted RBP7.86□□□□□ -1.15
CDH13-204ENST00000539548 M0R1B8 84 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 LINC00614P0C842 121 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 SPATA45Q537H7 98 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 TIMM23BQ5SRD1 257 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 COL5A1-AS1Q5SY13 56 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 DUX4L9Q6RFH8 374 aaPredicted RBP7.86□□□□□ -1.15
CDH13-204ENST00000539548 TSKUQ8WUA8 353 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 MBD6Q96DN6 1003 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 ZNF714Q96N38 554 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 MRPL27Q9P0M9 148 aaKnown RBP7.86□□□□□ -1.15
CDH13-204ENST00000539548 UQCR10Q9UDW1 63 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 DCHS1Q96JQ0 3298 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 MBD3L4A6NDZ8 208 aaPredicted RBP7.86□□□□□ -1.15
CDH13-204ENST00000539548 MBD3L3A6NE82 208 aaPredicted RBP7.86□□□□□ -1.15
CDH13-204ENST00000539548 DPRXA6NFQ7 191 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 MBD3L5A6NJ08 208 aaPredicted RBP7.86□□□□□ -1.15
CDH13-204ENST00000539548 INS-IGF2F8WCM5 200 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 C3orf79P0CE67 100 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 PMCHP20382 165 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 USF1P22415 310 aaPredicted RBP7.86□□□□□ -1.15
CDH13-204ENST00000539548 ZNF788Q6ZQV5 615 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 OR10W1Q8NGF6 305 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 MBD3L2Q8NHZ7 208 aaPredicted RBP7.86□□□□□ -1.15
CDH13-204ENST00000539548 OSR1Q8TAX0 266 aaPredicted RBP7.86□□□□□ -1.15
CDH13-204ENST00000539548 NDUFA4L2Q9NRX3 87 aa7.86□□□□□ -1.15
CDH13-204ENST00000539548 TNCP24821 2201 aa7.85□□□□□ -1.15
CDH13-204ENST00000539548 DMDP11532 3685 aa7.85□□□□□ -1.15
CDH13-204ENST00000539548 TRAV5A0A0B4J249 113 aa7.85□□□□□ -1.15
CDH13-204ENST00000539548 NPSP0C0P6 89 aa7.85□□□□□ -1.15
CDH13-204ENST00000539548 SAA1P0DJI8 122 aaPredicted RBP7.85□□□□□ -1.15
CDH13-204ENST00000539548 IGLC2P0DOY2 106 aa7.85□□□□□ -1.15
CDH13-204ENST00000539548 IGLC3P0DOY3 106 aa7.85□□□□□ -1.15
CDH13-204ENST00000539548 SELENOVP59797 346 aa7.85□□□□□ -1.15
CDH13-204ENST00000539548 UBE2L3P68036 154 aaKnown RBP7.85□□□□□ -1.15
CDH13-204ENST00000539548 ERHP84090 104 aaKnown RBP7.85□□□□□ -1.15
CDH13-204ENST00000539548 ZNF833PQ6ZTB9 187 aa7.85□□□□□ -1.15
CDH13-204ENST00000539548 SEM1Q6ZVN7 128 aa7.85□□□□□ -1.15
CDH13-204ENST00000539548 C18orf32Q8TCD1 76 aa7.85□□□□□ -1.15
CDH13-204ENST00000539548 FAM168AQ92567 244 aa7.85□□□□□ -1.15
CDH13-204ENST00000539548 CCL13Q99616 98 aa7.85□□□□□ -1.15
CDH13-204ENST00000539548 AMMECR1Q9Y4X0 333 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms