RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 SVEP1Q4LDE5 3571 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 ANK3Q12955 4377 aaKnown RBP8.39□□□□□ -1.07
LEMD3-202ENST00000539442 SH2D7A6NKC9 451 aaPredicted RBP8.39□□□□□ -1.07
LEMD3-202ENST00000539442 PRSS46E5RG02 174 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 TRIM77I1YAP6 450 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 AP4M1O00189 453 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 FBXO24O75426 580 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 DFFBO76075 338 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 HILS1P60008 231 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 BLCAPP62952 87 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 DLK1P80370 383 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 SLC38A11Q08AI6 406 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 ZNF266Q14584 549 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 C9orf152Q5JTZ5 239 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 ASPHD1Q5U4P2 390 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 OR8G2PQ6IF36 304 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 UNQ5815/PRO19632Q6UWF5 114 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 LILRB2Q8N423 598 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 TMEM217Q8N7C4 229 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 LFNGQ8NES3 379 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 OR5C1Q8NGR4 320 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 FAM110DQ8TAY7 271 aaPredicted RBP8.39□□□□□ -1.07
LEMD3-202ENST00000539442 ATP5SQ99766 215 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 GGACTQ9BVM4 153 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 PRSS22Q9GZN4 317 aa8.39□□□□□ -1.07
LEMD3-202ENST00000539442 HIVEP1P15822 2718 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 CELSR1Q9NYQ6 3014 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 BORCS7-ASMTA0A0B4J1R7 106 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 TRAV41A0A0B4J266 112 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 FNDC10F2Z333 226 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 CRLF1O75462 422 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 JTBO76095 146 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 REG1AP05451 166 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 RNASE1P07998 156 aaKnown RBP8.38□□□□□ -1.07
LEMD3-202ENST00000539442 APELAP0DMC3 54 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 DEFA4P12838 97 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 EIF5AP63241 154 aaKnown RBP8.38□□□□□ -1.07
LEMD3-202ENST00000539442 ARL16Q0P5N6 197 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 EXOSC2Q13868 293 aaKnown RBP8.38□□□□□ -1.07
LEMD3-202ENST00000539442 ECSCRQ19T08 205 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 KLK9Q2XQG4 91 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 C19orf54Q5BKX5 351 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 Q71RC1 249 aaPredicted RBP8.38□□□□□ -1.07
LEMD3-202ENST00000539442 SLC51BQ86UW2 128 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 HAPLN4Q86UW8 402 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 Q8N2B8 174 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 CACNG8Q8WXS5 425 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 TMEM147Q9BVK8 224 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 WNT10AQ9GZT5 417 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 ESM1Q9NQ30 184 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 KLK9Q9UKQ9 250 aa8.38□□□□□ -1.07
LEMD3-202ENST00000539442 SETXQ7Z333 2677 aaKnown RBP8.38□□□□□ -1.07
LEMD3-202ENST00000539442 RPS10-NUDT3A0A1W2PQS6 291 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 LINC01548A6NM66 108 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 H3BUA1 57 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 HIST1H1BP16401 226 aaKnown RBP8.37□□□□□ -1.07
LEMD3-202ENST00000539442 GPX4P36969 197 aaPredicted RBP8.37□□□□□ -1.07
LEMD3-202ENST00000539442 CD69Q07108 199 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 CLINT1Q14677 625 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 VWC2Q2TAL6 325 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 ETFRF1Q6IPR1 90 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 UBAC2Q8NBM4 344 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 STOML3Q8TAV4 291 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 BSCL2Q96G97 398 aaPredicted RBP8.37□□□□□ -1.07
LEMD3-202ENST00000539442 DUX5Q96PT3 197 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 ZNF471Q9BX82 626 aaPredicted RBP8.37□□□□□ -1.07
LEMD3-202ENST00000539442 GON7Q9BXV9 100 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 PARD6GQ9BYG4 376 aaPredicted RBP8.37□□□□□ -1.07
LEMD3-202ENST00000539442 SMIM3Q9BZL3 60 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 ZNF702PQ9H963 129 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 CYTL1Q9NRR1 136 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 UQCC1Q9NVA1 299 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 THYN1Q9P016 225 aa8.37□□□□□ -1.07
LEMD3-202ENST00000539442 PLXNB1O43157 2135 aa8.36□□□□□ -1.07
LEMD3-202ENST00000539442 IGLV11-55A0A075B6I3 123 aa8.36□□□□□ -1.07
LEMD3-202ENST00000539442 SCO2A0A1W2PP80 73 aa8.36□□□□□ -1.07
LEMD3-202ENST00000539442 BRI3O95415 125 aa8.36□□□□□ -1.07
LEMD3-202ENST00000539442 IFNA5P01569 189 aa8.36□□□□□ -1.07
LEMD3-202ENST00000539442 TPT1P13693 172 aaKnown RBP8.36□□□□□ -1.07
LEMD3-202ENST00000539442 OPRK1P41145 380 aa8.36□□□□□ -1.07
LEMD3-202ENST00000539442 MFAP2P55001 183 aa8.36□□□□□ -1.07
LEMD3-202ENST00000539442 UBA52P62987 128 aaKnown RBP8.36□□□□□ -1.07
LEMD3-202ENST00000539442 RPL7L1Q6DKI1 246 aaKnown RBP8.36□□□□□ -1.07
LEMD3-202ENST00000539442 SLC25A24Q6NUK1 477 aa8.36□□□□□ -1.07
LEMD3-202ENST00000539442 MISP3Q96FF7 219 aa8.36□□□□□ -1.07
LEMD3-202ENST00000539442 WFDC1Q9HC57 220 aa8.36□□□□□ -1.07
LEMD3-202ENST00000539442 MXRA5Q9NR99 2828 aa8.35□□□□□ -1.07
LEMD3-202ENST00000539442 G3V318 75 aa8.35□□□□□ -1.07
LEMD3-202ENST00000539442 PPIFP30405 207 aaKnown RBP8.35□□□□□ -1.07
LEMD3-202ENST00000539442 ARSJQ5FYB0 599 aaPredicted RBP8.35□□□□□ -1.07
LEMD3-202ENST00000539442 Q6ZS46 218 aa8.35□□□□□ -1.07
LEMD3-202ENST00000539442 C19orf35Q6ZS72 473 aa8.35□□□□□ -1.07
LEMD3-202ENST00000539442 SLC16A13Q7RTY0 426 aa8.35□□□□□ -1.07
LEMD3-202ENST00000539442 OR5T1Q8NG75 326 aa8.35□□□□□ -1.07
LEMD3-202ENST00000539442 SLC35E1Q96K37 410 aa8.35□□□□□ -1.07
LEMD3-202ENST00000539442 FANCD2OSQ96PS1 177 aa8.35□□□□□ -1.07
LEMD3-202ENST00000539442 ARV1Q9H2C2 271 aa8.35□□□□□ -1.07
LEMD3-202ENST00000539442 NPVFQ9HCQ7 196 aa8.35□□□□□ -1.07
LEMD3-202ENST00000539442 DMRT1Q9Y5R6 373 aa8.35□□□□□ -1.07
LEMD3-202ENST00000539442 F8P00451 2351 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms