RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 FAM168AQ92567 244 aa16.32■□□□□ 0.2
DDX55-205ENST00000538744 NIPSNAP3BQ9BS92 247 aa16.32■□□□□ 0.2
DDX55-205ENST00000538744 FAM90A2PQ658T7 463 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 PVRIGQ6DKI7 326 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 NPBQ8NG41 125 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 ACY3Q96HD9 319 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 SMCO4Q9NRQ5 59 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 TBL2Q9Y4P3 447 aaKnown RBP16.31■□□□□ 0.2
DDX55-205ENST00000538744 NDUFS8O00217 210 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 STAG3L2P0CL84 134 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 STAG3L3P0CL85 134 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 AREGP15514 252 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 CD81P60033 236 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 OR2T10Q8NGZ9 312 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 OR2T6Q8NHC8 308 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 SRSF12Q8WXF0 261 aaKnown RBP16.31■□□□□ 0.2
DDX55-205ENST00000538744 EAF1Q96JC9 268 aaPredicted RBP16.31■□□□□ 0.2
DDX55-205ENST00000538744 TBX15Q96SF7 602 aa16.31■□□□□ 0.2
DDX55-205ENST00000538744 FNDC4Q9H6D8 234 aaPredicted RBP16.31■□□□□ 0.2
DDX55-205ENST00000538744 TEX22C9J3V5 150 aa16.3■□□□□ 0.2
DDX55-205ENST00000538744 FCN1O00602 326 aa16.3■□□□□ 0.2
DDX55-205ENST00000538744 NDUFA3O95167 84 aa16.3■□□□□ 0.2
DDX55-205ENST00000538744 CXorf1O96002 111 aa16.3■□□□□ 0.2
DDX55-205ENST00000538744 UBE2E1P51965 193 aa16.3■□□□□ 0.2
DDX55-205ENST00000538744 SSBP2P81877 361 aaPredicted RBP16.3■□□□□ 0.2
DDX55-205ENST00000538744 HES1Q14469 280 aa16.3■□□□□ 0.2
DDX55-205ENST00000538744 ETFRF1Q6IPR1 90 aa16.3■□□□□ 0.2
DDX55-205ENST00000538744 ABHD5Q8WTS1 349 aa16.3■□□□□ 0.2
DDX55-205ENST00000538744 GATAD1Q8WUU5 269 aa16.3■□□□□ 0.2
DDX55-205ENST00000538744 TVP23CQ96ET8 276 aa16.3■□□□□ 0.2
DDX55-205ENST00000538744 SRSF8Q9BRL6 282 aaKnown RBP16.3■□□□□ 0.2
DDX55-205ENST00000538744 POLR3KQ9Y2Y1 108 aaPredicted RBP16.3■□□□□ 0.2
DDX55-205ENST00000538744 NAV3Q8IVL0 2385 aa16.3■□□□□ 0.2
DDX55-205ENST00000538744 ARL14EPLP0DKL9 152 aa16.29■□□□□ 0.2
DDX55-205ENST00000538744 AKR1C3P42330 323 aa16.29■□□□□ 0.2
DDX55-205ENST00000538744 ATP5J2P56134 94 aa16.29■□□□□ 0.2
DDX55-205ENST00000538744 DYNAPQ8N1N2 210 aa16.29■□□□□ 0.2
DDX55-205ENST00000538744 OR1P1Q8NH06 330 aa16.29■□□□□ 0.2
DDX55-205ENST00000538744 C10orf105Q8TEF2 133 aa16.29■□□□□ 0.2
DDX55-205ENST00000538744 PLXNB1O43157 2135 aa16.29■□□□□ 0.2
DDX55-205ENST00000538744 TMEM250H0YL14 139 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 CORTO00230 105 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 PAGE4O60829 102 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 PAX6P26367 422 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 CLEC2AQ6UVW9 174 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 NANPQ8TBE9 248 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 CNIH1O95406 144 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 MT-CO2P00403 227 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 APELAP0DMC3 54 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 CD24P25063 80 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 SPNS3Q6ZMD2 512 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 CYP2G1PQ6ZSU1 146 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 MISP3Q96FF7 219 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 C19orf24Q9BVV8 132 aa16.28■□□□□ 0.2
DDX55-205ENST00000538744 SEPSECSQ9HD40 501 aaKnown RBP16.28■□□□□ 0.2
DDX55-205ENST00000538744 F11RQ9Y624 299 aaKnown RBP16.28■□□□□ 0.2
DDX55-205ENST00000538744 MFAP2P55001 183 aa16.27■□□□□ 0.19
DDX55-205ENST00000538744 THAP8Q8NA92 274 aa16.27■□□□□ 0.19
DDX55-205ENST00000538744 OR4F5Q8NH21 305 aa16.27■□□□□ 0.19
DDX55-205ENST00000538744 NPIPB3Q92617 1050 aa16.27■□□□□ 0.19
DDX55-205ENST00000538744 OR4F4Q96R69 305 aa16.27■□□□□ 0.19
DDX55-205ENST00000538744 LPAR2Q9HBW0 351 aa16.27■□□□□ 0.19
DDX55-205ENST00000538744 VWC2LB2RUY7 222 aa16.26■□□□□ 0.19
DDX55-205ENST00000538744 CRYGCP07315 174 aa16.26■□□□□ 0.19
DDX55-205ENST00000538744 ATF4P18848 351 aaPredicted RBP16.26■□□□□ 0.19
DDX55-205ENST00000538744 EBI3Q14213 229 aa16.26■□□□□ 0.19
DDX55-205ENST00000538744 C5orf64Q2M2E5 130 aa16.26■□□□□ 0.19
DDX55-205ENST00000538744 FAM78BQ5VT40 261 aa16.26■□□□□ 0.19
DDX55-205ENST00000538744 SPATA31B1PQ5VZV4 182 aa16.26■□□□□ 0.19
DDX55-205ENST00000538744 C17orf50Q8WW18 174 aa16.26■□□□□ 0.19
DDX55-205ENST00000538744 MALSU1Q96EH3 234 aa16.26■□□□□ 0.19
DDX55-205ENST00000538744 FUT9Q9Y231 359 aa16.26■□□□□ 0.19
DDX55-205ENST00000538744 FLNCQ14315 2725 aa16.26■□□□□ 0.19
DDX55-205ENST00000538744 AKAP6Q13023 2319 aa16.25■□□□□ 0.19
DDX55-205ENST00000538744 GATA2P23769 480 aaPredicted RBP16.25■□□□□ 0.19
DDX55-205ENST00000538744 RND2P52198 227 aa16.25■□□□□ 0.19
DDX55-205ENST00000538744 C22orf15Q8WYQ4 148 aa16.25■□□□□ 0.19
DDX55-205ENST00000538744 TUBA4BQ9H853 241 aa16.25■□□□□ 0.19
DDX55-205ENST00000538744 USP9XQ93008 2570 aaPredicted RBP16.25■□□□□ 0.19
DDX55-205ENST00000538744 IGHV4-61A0A0C4DH41 118 aa16.25■□□□□ 0.19
DDX55-205ENST00000538744 TCRBV4S1A1TA0A5B7 111 aa16.25■□□□□ 0.19
DDX55-205ENST00000538744 C11orf94C9JXX5 98 aa16.25■□□□□ 0.19
DDX55-205ENST00000538744 TSPAN9O75954 239 aa16.25■□□□□ 0.19
DDX55-205ENST00000538744 COX6B1P14854 86 aa16.25■□□□□ 0.19
DDX55-205ENST00000538744 GCHFRP30047 84 aa16.25■□□□□ 0.19
DDX55-205ENST00000538744 PNRC1Q12796 327 aaPredicted RBP16.25■□□□□ 0.19
DDX55-205ENST00000538744 Q8N6K4 173 aa16.25■□□□□ 0.19
DDX55-205ENST00000538744 C15orf54Q8N8G6 183 aa16.25■□□□□ 0.19
DDX55-205ENST00000538744 ZNF727A8MUV8 499 aa16.24■□□□□ 0.19
DDX55-205ENST00000538744 IGHV3-48P01763 117 aa16.24■□□□□ 0.19
DDX55-205ENST00000538744 OR5G3P0C626 314 aa16.24■□□□□ 0.19
DDX55-205ENST00000538744 UBE2G2P60604 165 aa16.24■□□□□ 0.19
DDX55-205ENST00000538744 SELENOTP62341 195 aa16.24■□□□□ 0.19
DDX55-205ENST00000538744 FBLN7Q53RD9 439 aa16.24■□□□□ 0.19
DDX55-205ENST00000538744 MIR17HGQ75NE6 70 aa16.24■□□□□ 0.19
DDX55-205ENST00000538744 RNF2Q99496 336 aa16.24■□□□□ 0.19
DDX55-205ENST00000538744 TXNDC17Q9BRA2 123 aa16.24■□□□□ 0.19
DDX55-205ENST00000538744 SLC25A33Q9BSK2 321 aa16.24■□□□□ 0.19
DDX55-205ENST00000538744 MRPL36Q9P0J6 103 aaKnown RBP16.24■□□□□ 0.19
DDX55-205ENST00000538744 TACC2O95359 2948 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms