RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 LINC01560Q8TB33 94 aa20.15■□□□□ 0.82
RAB40C-204ENST00000538492 ZNF430Q9H8G1 570 aaPredicted RBP20.15■□□□□ 0.82
RAB40C-204ENST00000538492 TPRP12270 2363 aaKnown RBP20.15■□□□□ 0.82
RAB40C-204ENST00000538492 CGB1A6NKQ9 187 aa20.14■□□□□ 0.82
RAB40C-204ENST00000538492 DLL1O00548 723 aa20.14■□□□□ 0.82
RAB40C-204ENST00000538492 TYMSP04818 313 aa20.14■□□□□ 0.82
RAB40C-204ENST00000538492 APOBEC3AP31941 199 aaPredicted RBP20.14■□□□□ 0.82
RAB40C-204ENST00000538492 ATP5IP56385 69 aaPredicted RBP20.14■□□□□ 0.82
RAB40C-204ENST00000538492 OR1P1Q8NH06 330 aa20.14■□□□□ 0.82
RAB40C-204ENST00000538492 TMEM167AQ8TBQ9 72 aa20.14■□□□□ 0.82
RAB40C-204ENST00000538492 ZNF503Q96F45 646 aa20.14■□□□□ 0.82
RAB40C-204ENST00000538492 SLC35E1Q96K37 410 aa20.14■□□□□ 0.82
RAB40C-204ENST00000538492 UHRF2Q96PU4 802 aa20.14■□□□□ 0.82
RAB40C-204ENST00000538492 TPSG1Q9NRR2 321 aa20.14■□□□□ 0.82
RAB40C-204ENST00000538492 KAAG1Q9UBP8 84 aa20.14■□□□□ 0.82
RAB40C-204ENST00000538492 WASHC3Q9Y3C0 194 aa20.14■□□□□ 0.82
RAB40C-204ENST00000538492 K7EN84 100 aa20.14■□□□□ 0.81
RAB40C-204ENST00000538492 SLC25A17O43808 307 aa20.14■□□□□ 0.81
RAB40C-204ENST00000538492 IGLV2-23P01705 113 aa20.14■□□□□ 0.81
RAB40C-204ENST00000538492 IGHV1-8P0DP01 117 aa20.14■□□□□ 0.81
RAB40C-204ENST00000538492 LINC00311Q8N616 119 aa20.14■□□□□ 0.81
RAB40C-204ENST00000538492 VKORC1Q9BQB6 163 aa20.14■□□□□ 0.81
RAB40C-204ENST00000538492 LCN2P80188 198 aa20.13■□□□□ 0.81
RAB40C-204ENST00000538492 SSBP2P81877 361 aaPredicted RBP20.13■□□□□ 0.81
RAB40C-204ENST00000538492 TEX38Q6PEX7 206 aa20.13■□□□□ 0.81
RAB40C-204ENST00000538492 TECRQ9NZ01 308 aaKnown RBP20.13■□□□□ 0.81
RAB40C-204ENST00000538492 DCHS2Q6V1P9 2916 aa20.13■□□□□ 0.81
RAB40C-204ENST00000538492 CD3EP07766 207 aa20.13■□□□□ 0.81
RAB40C-204ENST00000538492 VSTM2AQ8TAG5 236 aa20.13■□□□□ 0.81
RAB40C-204ENST00000538492 ZNF596Q8TC21 504 aa20.13■□□□□ 0.81
RAB40C-204ENST00000538492 ENSAO43768 121 aaKnown RBP20.12■□□□□ 0.81
RAB40C-204ENST00000538492 TRBV23-1A0A0A0MS06 115 aa20.12■□□□□ 0.81
RAB40C-204ENST00000538492 HLA-DRB5Q30154 266 aa20.12■□□□□ 0.81
RAB40C-204ENST00000538492 C11orf42Q8N5U0 333 aa20.12■□□□□ 0.81
RAB40C-204ENST00000538492 OR10G8Q8NGN5 311 aa20.12■□□□□ 0.81
RAB40C-204ENST00000538492 REG1AP05451 166 aa20.11■□□□□ 0.81
RAB40C-204ENST00000538492 CRYBB3P26998 211 aa20.11■□□□□ 0.81
RAB40C-204ENST00000538492 FOXL1Q12952 345 aa20.11■□□□□ 0.81
RAB40C-204ENST00000538492 FAM71F2Q6NXP2 309 aa20.11■□□□□ 0.81
RAB40C-204ENST00000538492 C8orf31Q8N9H6 132 aa20.11■□□□□ 0.81
RAB40C-204ENST00000538492 C11orf52Q96A22 123 aa20.11■□□□□ 0.81
RAB40C-204ENST00000538492 TMEM167BQ9NRX6 74 aa20.11■□□□□ 0.81
RAB40C-204ENST00000538492 FAM90A27PA6NNH2 459 aa20.11■□□□□ 0.81
RAB40C-204ENST00000538492 GRNP28799 593 aaKnown RBP20.11■□□□□ 0.81
RAB40C-204ENST00000538492 FNDC4Q9H6D8 234 aaPredicted RBP20.11■□□□□ 0.81
RAB40C-204ENST00000538492 A0A1W2PN81 502 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 SLC17A3O00476 420 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 OR5G3P0C626 314 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 MORN5Q5VZ52 161 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 CACNG8Q8WXS5 425 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 MALRD1Q5VYJ5 2156 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 TRAV20A0A0B4J274 112 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 B9A039 149 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 AREGP15514 252 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 OR4A5Q8NH83 315 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 IMMP2LQ96T52 175 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 PFDN5Q99471 154 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 TMEM133Q9H2Q1 129 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 DMRT1Q9Y5R6 373 aa20.1■□□□□ 0.81
RAB40C-204ENST00000538492 PQLC2Q6ZP29 291 aa20.09■□□□□ 0.81
RAB40C-204ENST00000538492 TRAPPC1Q9Y5R8 145 aa20.09■□□□□ 0.81
RAB40C-204ENST00000538492 A0A087X0M5 115 aa20.09■□□□□ 0.81
RAB40C-204ENST00000538492 TRAV5A0A0B4J249 113 aa20.09■□□□□ 0.81
RAB40C-204ENST00000538492 A0A1B0GX30 115 aa20.09■□□□□ 0.81
RAB40C-204ENST00000538492 AMBPP02760 352 aa20.09■□□□□ 0.81
RAB40C-204ENST00000538492 RPL15P61313 204 aaKnown RBP20.09■□□□□ 0.81
RAB40C-204ENST00000538492 OR5I1Q13606 314 aa20.09■□□□□ 0.81
RAB40C-204ENST00000538492 EAF1Q96JC9 268 aaPredicted RBP20.09■□□□□ 0.81
RAB40C-204ENST00000538492 SLC25A33Q9BSK2 321 aa20.09■□□□□ 0.81
RAB40C-204ENST00000538492 ZZEF1O43149 2961 aa20.09■□□□□ 0.81
RAB40C-204ENST00000538492 IGF2RP11717 2491 aa20.08■□□□□ 0.81
RAB40C-204ENST00000538492 GPX4P36969 197 aaPredicted RBP20.08■□□□□ 0.81
RAB40C-204ENST00000538492 ZNF137PP52743 207 aa20.08■□□□□ 0.81
RAB40C-204ENST00000538492 NPIPB3Q92617 1050 aa20.08■□□□□ 0.81
RAB40C-204ENST00000538492 ABCA4P78363 2273 aa20.08■□□□□ 0.81
RAB40C-204ENST00000538492 NBASA2RRP1 2371 aa20.08■□□□□ 0.81
RAB40C-204ENST00000538492 TAS2R45P59539 299 aa20.08■□□□□ 0.8
RAB40C-204ENST00000538492 VMA21Q3ZAQ7 101 aa20.08■□□□□ 0.8
RAB40C-204ENST00000538492 GGTLC3B5MD39 225 aa20.07■□□□□ 0.8
RAB40C-204ENST00000538492 INS-IGF2F8WCM5 200 aa20.07■□□□□ 0.8
RAB40C-204ENST00000538492 ANKHD1Q8IWZ3 2542 aaKnown RBP20.07■□□□□ 0.8
RAB40C-204ENST00000538492 A0A1W2PPI3 338 aa20.07■□□□□ 0.8
RAB40C-204ENST00000538492 HELTA6NFD8 242 aa20.07■□□□□ 0.8
RAB40C-204ENST00000538492 C9JCJ5 164 aa20.07■□□□□ 0.8
RAB40C-204ENST00000538492 C8orf88P0DMB2 117 aa20.07■□□□□ 0.8
RAB40C-204ENST00000538492 APELAP0DMC3 54 aa20.07■□□□□ 0.8
RAB40C-204ENST00000538492 PPOXP50336 477 aa20.07■□□□□ 0.8
RAB40C-204ENST00000538492 ZNF90Q03938 601 aa20.07■□□□□ 0.8
RAB40C-204ENST00000538492 COA6Q5JTJ3 125 aaKnown RBP20.07■□□□□ 0.8
RAB40C-204ENST00000538492 C19orf24Q9BVV8 132 aa20.07■□□□□ 0.8
RAB40C-204ENST00000538492 MRPL36Q9P0J6 103 aaKnown RBP20.07■□□□□ 0.8
RAB40C-204ENST00000538492 MC5RP33032 325 aa20.06■□□□□ 0.8
RAB40C-204ENST00000538492 SUMO1P63165 101 aaKnown RBP20.06■□□□□ 0.8
RAB40C-204ENST00000538492 CENPWQ5EE01 88 aa20.06■□□□□ 0.8
RAB40C-204ENST00000538492 RALYQ9UKM9 306 aaKnown RBP20.06■□□□□ 0.8
RAB40C-204ENST00000538492 GNG4P50150 75 aa20.06■□□□□ 0.8
RAB40C-204ENST00000538492 PNKDQ8N490 385 aa20.06■□□□□ 0.8
RAB40C-204ENST00000538492 PRDM13Q9H4Q3 707 aa20.06■□□□□ 0.8
RAB40C-204ENST00000538492 PSMB11A5LHX3 300 aa20.05■□□□□ 0.8
RAB40C-204ENST00000538492 HIST1H1BP16401 226 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms