RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TIMP3P35625 211 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 TCF23Q7RTU1 214 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 RTBDNQ9BSG5 229 aaPredicted RBP14.04□□□□□ -0.16
SCARB1-205ENST00000538291 RBBP6Q7Z6E9 1792 aaKnown RBP14.04□□□□□ -0.16
SCARB1-205ENST00000538291 MALP21145 153 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 Q5BKY6 102 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 ATOH7Q8N100 152 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 C15orf61A6NNL5 157 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 IL18BPO95998 194 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 OR9G9P0C7N8 305 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 NSUN5P1Q3KNT7 163 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 SPTBP11277 2137 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 NHLRC3Q5JS37 347 aa14.03□□□□□ -0.16
SCARB1-205ENST00000538291 LAIR2Q6ISS4 152 aa14.03□□□□□ -0.16
SCARB1-205ENST00000538291 TNFRSF14Q92956 283 aa14.03□□□□□ -0.16
SCARB1-205ENST00000538291 JKAMPQ9P055 326 aa14.03□□□□□ -0.16
SCARB1-205ENST00000538291 TTC9CQ8N5M4 171 aa14.03□□□□□ -0.16
SCARB1-205ENST00000538291 SLC17A3O00476 420 aa14.03□□□□□ -0.16
SCARB1-205ENST00000538291 TIMM23O14925 209 aa14.03□□□□□ -0.16
SCARB1-205ENST00000538291 EFNA4P52798 201 aa14.03□□□□□ -0.16
SCARB1-205ENST00000538291 ZP1P60852 638 aa14.03□□□□□ -0.16
SCARB1-205ENST00000538291 ZNF497Q6ZNH5 498 aa14.03□□□□□ -0.16
SCARB1-205ENST00000538291 OR5AN1Q8NGI8 311 aa14.03□□□□□ -0.16
SCARB1-205ENST00000538291 GLMPQ8WWB7 406 aa14.03□□□□□ -0.16
SCARB1-205ENST00000538291 COL11A1P12107 1806 aaPredicted RBP14.02□□□□□ -0.16
SCARB1-205ENST00000538291 IGHV1-46P01743 117 aa14.02□□□□□ -0.16
SCARB1-205ENST00000538291 IGFBP3P17936 291 aaPredicted RBP14.02□□□□□ -0.16
SCARB1-205ENST00000538291 ORMDL3Q8N138 153 aa14.02□□□□□ -0.16
SCARB1-205ENST00000538291 C11orf44Q8N8P7 122 aa14.02□□□□□ -0.16
SCARB1-205ENST00000538291 FOXC2Q99958 501 aa14.02□□□□□ -0.16
SCARB1-205ENST00000538291 SHISA3A0PJX4 238 aa14.02□□□□□ -0.16
SCARB1-205ENST00000538291 PINLYPA6NC86 204 aa14.02□□□□□ -0.16
SCARB1-205ENST00000538291 OR10J3Q5JRS4 329 aa14.02□□□□□ -0.17
SCARB1-205ENST00000538291 TMEM42Q69YG0 159 aa14.02□□□□□ -0.17
SCARB1-205ENST00000538291 WFIKKN1Q96NZ8 548 aa14.02□□□□□ -0.17
SCARB1-205ENST00000538291 MDC1Q14676 2089 aaKnown RBP14.02□□□□□ -0.17
SCARB1-205ENST00000538291 SMIM13P0DJ93 91 aa14.02□□□□□ -0.17
SCARB1-205ENST00000538291 ATP5G3P48201 142 aa14.02□□□□□ -0.17
SCARB1-205ENST00000538291 ZNF525Q8N782 197 aa14.02□□□□□ -0.17
SCARB1-205ENST00000538291 GTF3AQ92664 365 aaKnown RBP14.02□□□□□ -0.17
SCARB1-205ENST00000538291 ZNF672Q499Z4 452 aaPredicted RBP14.01□□□□□ -0.17
SCARB1-205ENST00000538291 C20orf204Q6ZNR8 217 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 NEUROG1Q92886 237 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 AKAP6Q13023 2319 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 TRGV4A0A0C4DH28 118 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 ESPL1Q14674 2120 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 TRAV21A0A0B4J279 112 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 RBMY1BA6NDE4 496 aaKnown RBP14.01□□□□□ -0.17
SCARB1-205ENST00000538291 RBMY1EA6NEQ0 496 aaKnown RBP14.01□□□□□ -0.17
SCARB1-205ENST00000538291 DPRXA6NFQ7 191 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 TMEM50AO95807 157 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 RBMY1DP0C7P1 496 aaKnown RBP14.01□□□□□ -0.17
SCARB1-205ENST00000538291 RBMY1A1P0DJD3 496 aaKnown RBP14.01□□□□□ -0.17
SCARB1-205ENST00000538291 RBMY1CP0DJD4 496 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 ABCA7Q8IZY2 2146 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.01□□□□□ -0.17
SCARB1-205ENST00000538291 NUDT10Q8NFP7 164 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 TRBV7-9A0A0J9YWB2 115 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 DTX2Q86UW9 622 aa14.01□□□□□ -0.17
SCARB1-205ENST00000538291 CMC4P56277 68 aaPredicted RBP14□□□□□ -0.17
SCARB1-205ENST00000538291 FLVCR1-AS1Q8TAF5 88 aa14□□□□□ -0.17
SCARB1-205ENST00000538291 ST20Q9HBF5 79 aa14□□□□□ -0.17
SCARB1-205ENST00000538291 MRPL16Q9NX20 251 aaKnown RBP14□□□□□ -0.17
SCARB1-205ENST00000538291 CNOT1A5YKK6 2376 aaKnown RBP14□□□□□ -0.17
SCARB1-205ENST00000538291 KIF13BQ9NQT8 1826 aa14□□□□□ -0.17
SCARB1-205ENST00000538291 C1QTNF9BB2RNN3 333 aa14□□□□□ -0.17
SCARB1-205ENST00000538291 CRPP02741 224 aa14□□□□□ -0.17
SCARB1-205ENST00000538291 PAX8Q06710 450 aa14□□□□□ -0.17
SCARB1-205ENST00000538291 FOXF2Q12947 444 aa14□□□□□ -0.17
SCARB1-205ENST00000538291 SLC25A28Q96A46 364 aa14□□□□□ -0.17
SCARB1-205ENST00000538291 SBF2Q86WG5 1849 aa14□□□□□ -0.17
SCARB1-205ENST00000538291 CCL1P22362 96 aa13.99□□□□□ -0.17
SCARB1-205ENST00000538291 PSMG4Q5JS54 123 aa13.99□□□□□ -0.17
SCARB1-205ENST00000538291 TRGV11A0A075B6L2 103 aa13.99□□□□□ -0.17
SCARB1-205ENST00000538291 PARP14Q460N5 1801 aa13.99□□□□□ -0.17
SCARB1-205ENST00000538291 TRAV41A0A0B4J266 112 aa13.99□□□□□ -0.17
SCARB1-205ENST00000538291 GHRHP01286 108 aa13.99□□□□□ -0.17
SCARB1-205ENST00000538291 IFI27P40305 119 aaPredicted RBP13.99□□□□□ -0.17
SCARB1-205ENST00000538291 MYOFQ9NZM1 2061 aa13.99□□□□□ -0.17
SCARB1-205ENST00000538291 PLSCR4Q9NRQ2 329 aa13.99□□□□□ -0.17
SCARB1-205ENST00000538291 IGKV1D-13A0A0B4J2D9 117 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 IGKV1-13P0DP09 117 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 LYZL4Q96KX0 146 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 VCX2Q9H322 139 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 SPTBN2O15020 2390 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 C3orf36Q3SXR2 165 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 ZNF585BQ52M93 769 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 TTC32Q5I0X7 151 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 TRAV9-1A0A075B6T8 112 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 IZUMO1RA6ND01 250 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 PRCDQ00LT1 54 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 VGLL1Q99990 258 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 GNLYP22749 145 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 FBLN5Q9UBX5 448 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 DOCK3Q8IZD9 2030 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 TFF1P04155 84 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 SRP19P09132 144 aaKnown RBP13.98□□□□□ -0.17
SCARB1-205ENST00000538291 DDTP30046 118 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 UNQ6494/PRO21346Q6UXR6 183 aa13.98□□□□□ -0.17
SCARB1-205ENST00000538291 ZNF646O15015 1829 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms