RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 MRGPRG-AS1Q2M3A8 158 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 LINC01551Q86U37 167 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 OR2T6Q8NHC8 308 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 RNF2Q99496 336 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 NBEAQ8NFP9 2946 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 IGF2RP11717 2491 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 SCO2A0A1W2PP80 73 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 LY6HO94772 140 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 CRYGBP07316 175 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 SOD3P08294 240 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 CD99P14209 185 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 RPL27AP46776 148 aaKnown RBP12.6□□□□□ -0.39
MKS1-204ENST00000537529 PRB3Q04118 309 aaPredicted RBP12.6□□□□□ -0.39
MKS1-204ENST00000537529 PSG5Q15238 335 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 TNXAQ16473 311 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 DERL1Q9BUN8 251 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 MRPL32Q9BYC8 188 aaKnown RBP12.6□□□□□ -0.39
MKS1-204ENST00000537529 ZNF98A6NK75 572 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 C22orf46C9J442 243 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 PFN1P07737 140 aaKnown RBP12.6□□□□□ -0.39
MKS1-204ENST00000537529 AREGP15514 252 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 GATA2P23769 480 aaPredicted RBP12.6□□□□□ -0.39
MKS1-204ENST00000537529 UNQ6494/PRO21346Q6UXR6 183 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 PQLC2Q6ZP29 291 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 DTX2Q86UW9 622 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 NECAP1Q8NC96 275 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 SIGLEC9Q9Y336 463 aa12.6□□□□□ -0.39
MKS1-204ENST00000537529 IGLC7A0M8Q6 106 aa12.59□□□□□ -0.39
MKS1-204ENST00000537529 TRGC2P03986 189 aa12.59□□□□□ -0.39
MKS1-204ENST00000537529 SRP14P37108 136 aaKnown RBP12.59□□□□□ -0.39
MKS1-204ENST00000537529 ETFRF1Q6IPR1 90 aa12.59□□□□□ -0.39
MKS1-204ENST00000537529 ZNF114Q8NC26 417 aa12.59□□□□□ -0.39
MKS1-204ENST00000537529 OR5T1Q8NG75 326 aa12.59□□□□□ -0.39
MKS1-204ENST00000537529 C11orf52Q96A22 123 aa12.59□□□□□ -0.39
MKS1-204ENST00000537529 C12orf57Q99622 126 aa12.59□□□□□ -0.39
MKS1-204ENST00000537529 PYGO2Q9BRQ0 406 aa12.59□□□□□ -0.39
MKS1-204ENST00000537529 TCEAL7Q9BRU2 100 aa12.59□□□□□ -0.39
MKS1-204ENST00000537529 FNDC4Q9H6D8 234 aaPredicted RBP12.59□□□□□ -0.39
MKS1-204ENST00000537529 CHODLQ9H9P2 273 aa12.59□□□□□ -0.39
MKS1-204ENST00000537529 LY6LH3BQJ8 138 aa12.58□□□□□ -0.39
MKS1-204ENST00000537529 PPP1R2P9O14990 202 aa12.58□□□□□ -0.39
MKS1-204ENST00000537529 CNTFRP26992 372 aa12.58□□□□□ -0.39
MKS1-204ENST00000537529 COMPP49747 757 aaPredicted RBP12.58□□□□□ -0.39
MKS1-204ENST00000537529 MEOX2P50222 304 aa12.58□□□□□ -0.39
MKS1-204ENST00000537529 THAP8Q8NA92 274 aa12.58□□□□□ -0.39
MKS1-204ENST00000537529 RNF5Q99942 180 aa12.58□□□□□ -0.39
MKS1-204ENST00000537529 TCRBV4S1A1TA0A5B7 111 aa12.58□□□□□ -0.4
MKS1-204ENST00000537529 M0R1W7 72 aa12.58□□□□□ -0.4
MKS1-204ENST00000537529 OR7C2O60412 319 aa12.58□□□□□ -0.4
MKS1-204ENST00000537529 REG1AP05451 166 aa12.58□□□□□ -0.4
MKS1-204ENST00000537529 C8orf88P0DMB2 117 aa12.58□□□□□ -0.4
MKS1-204ENST00000537529 NPIPB3Q92617 1050 aa12.58□□□□□ -0.4
MKS1-204ENST00000537529 SSBP3Q9BWW4 388 aaPredicted RBP12.58□□□□□ -0.4
MKS1-204ENST00000537529 LOC105371242A0A075B767 164 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 HIST1H2BKO60814 126 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 HIST1H2BJP06899 126 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 HIST1H2BOP23527 126 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 HIST1H2BBP33778 126 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 HIST1H2BDP58876 126 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 SELENOTP62341 195 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 HIST1H2BCP62807 126 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 HIST2H2BEQ16778 126 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.57□□□□□ -0.4
MKS1-204ENST00000537529 TPTE2P1Q5T6R2 138 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 PVRIGQ6DKI7 326 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 KCNIP4Q6PIL6 250 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 OR1L4Q8NGR5 311 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 HIST1H2BHQ93079 126 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 PFDN5Q99471 154 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 HIST1H2BNQ99877 126 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 HIST1H2BMQ99879 126 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 SRD5A3Q9H8P0 318 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 ANKHD1Q8IWZ3 2542 aaKnown RBP12.57□□□□□ -0.4
MKS1-204ENST00000537529 MDFIC2A0A1B0GVS7 189 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 COX7A2P2O60397 106 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 NDUFA6P56556 154 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 BPIFB3P59826 476 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 PPP1R27Q86WC6 154 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 OR11H6Q8NGC7 330 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 C22orf15Q8WYQ4 148 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 SLC25A33Q9BSK2 321 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 ELOVL1Q9BW60 279 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 DNAJC4Q9NNZ3 241 aa12.57□□□□□ -0.4
MKS1-204ENST00000537529 PSMB11A5LHX3 300 aa12.56□□□□□ -0.4
MKS1-204ENST00000537529 S100A9P06702 114 aaKnown RBP12.56□□□□□ -0.4
MKS1-204ENST00000537529 SMIM6P0DI80 62 aa12.56□□□□□ -0.4
MKS1-204ENST00000537529 HTR1DP28221 377 aa12.56□□□□□ -0.4
MKS1-204ENST00000537529 ARF6P62330 175 aa12.56□□□□□ -0.4
MKS1-204ENST00000537529 SSBP2P81877 361 aaPredicted RBP12.56□□□□□ -0.4
MKS1-204ENST00000537529 TMEM37Q8WXS4 190 aa12.56□□□□□ -0.4
MKS1-204ENST00000537529 ZNF503Q96F45 646 aa12.56□□□□□ -0.4
MKS1-204ENST00000537529 MISP3Q96FF7 219 aa12.56□□□□□ -0.4
MKS1-204ENST00000537529 SPTA1P02549 2419 aa12.56□□□□□ -0.4
MKS1-204ENST00000537529 TRBV20OR9-2A0A075B6H5 130 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 PPP5D1E7EU14 171 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 CORTO00230 105 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 GGCTO75223 188 aaKnown RBP12.55□□□□□ -0.4
MKS1-204ENST00000537529 HOXA5P20719 270 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 CEACAM3P40198 252 aa12.55□□□□□ -0.4
MKS1-204ENST00000537529 HCP5Q6MZN7 132 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms