RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SEC22CQ9BRL7 303 aa3.62□□□□□ -1.83
CLIP1-207ENST00000536634 FUNDC2Q9BWH2 189 aa3.62□□□□□ -1.83
CLIP1-207ENST00000536634 ZC4H2Q9NQZ6 224 aa3.62□□□□□ -1.83
CLIP1-207ENST00000536634 FGFR1OP2Q9NVK5 253 aa3.62□□□□□ -1.83
CLIP1-207ENST00000536634 IMPAD1Q9NX62 359 aa3.62□□□□□ -1.83
CLIP1-207ENST00000536634 PEF1Q9UBV8 284 aaKnown RBP3.62□□□□□ -1.83
CLIP1-207ENST00000536634 APLNQ9ULZ1 77 aa3.62□□□□□ -1.83
CLIP1-207ENST00000536634 TP53TG1Q9Y2A0 90 aa3.62□□□□□ -1.83
CLIP1-207ENST00000536634 SAMHD1Q9Y3Z3 626 aaKnown RBP3.62□□□□□ -1.83
CLIP1-207ENST00000536634 TMEM14AQ9Y6G1 99 aa3.62□□□□□ -1.83
CLIP1-207ENST00000536634 TMEM30CPA0ZSE6 113 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 LINC00587B1AMM8 73 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 FAM25AB3EWG3 89 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 FAM25CB3EWG5 89 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 FAM25GB3EWG6 89 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 M0R2N4 97 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 DENRO43583 198 aaKnown RBP3.61□□□□□ -1.83
CLIP1-207ENST00000536634 PRKYO43930 277 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 TNFAIP8O95379 198 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 CA2P00918 260 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 ANXA8P13928 327 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 ATP6V1B2P21281 511 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 KCNJ3P48549 501 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 SPCS3P61009 180 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 RAB4BP61018 213 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 HERV-K104P63124 156 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 ADARB1P78563 741 aaKnown RBP3.61□□□□□ -1.83
CLIP1-207ENST00000536634 TMEM267Q0VDI3 215 aaPredicted RBP3.61□□□□□ -1.83
CLIP1-207ENST00000536634 CDK10Q15131 360 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 RPEL1Q2QD12 228 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 HES5Q5TA89 166 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 FAM131AQ6UXB0 335 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 LINC00299Q6ZSB3 139 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 Q6ZVH6 145 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 SAXO1Q8IYX7 474 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 OR5T1Q8NG75 326 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 OR1L1Q8NH94 360 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 LRRC20Q8TCA0 184 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 RNASE8Q8TDE3 154 aaKnown RBP3.61□□□□□ -1.83
CLIP1-207ENST00000536634 DYNLRB2Q8TF09 96 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 CACNG8Q8WXS5 425 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 C10orf35Q96D05 121 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 VSIG2Q96IQ7 327 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 ATP6V0BQ99437 205 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 TBX5Q99593 518 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 EFCAB1Q9HAE3 211 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 RHOFQ9HBH0 211 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 ZNF355PQ9NSJ1 428 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 CLN6Q9NWW5 311 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 TVP23BQ9NYZ1 205 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 GNG12Q9UBI6 72 aa3.61□□□□□ -1.83
CLIP1-207ENST00000536634 A0A0A6YYD4 124 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 A0A1W2PQL4 384 aaPredicted RBP3.6□□□□□ -1.83
CLIP1-207ENST00000536634 RAB19A4D1S5 217 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 C2orf70A6NJV1 201 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 IGLL5B9A064 214 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 ZNF670-ZNF695F2Z2N8 137 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 WRBO00258 174 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 FKBP6O75344 327 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 DHFRP00374 187 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 HBZP02008 142 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 MT-ND4P03905 459 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 KRT8P05787 483 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 P0C879 139 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 UBCP0CG48 685 aaKnown RBP3.6□□□□□ -1.83
CLIP1-207ENST00000536634 SAA2P0DJI9 122 aaPredicted RBP3.6□□□□□ -1.83
CLIP1-207ENST00000536634 RAB3AP20336 220 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 GZMHP20718 246 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 FLI1Q01543 452 aaPredicted RBP3.6□□□□□ -1.83
CLIP1-207ENST00000536634 PLGLAQ15195 96 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 KISS1Q15726 138 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 DDI2Q5TDH0 399 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 LPCAT4Q643R3 524 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 ELP2Q6IA86 826 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 OR2T5Q6IEZ7 315 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 ZNF833PQ6ZTB9 187 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 SLC16A13Q7RTY0 426 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 HS3ST5Q8IZT8 346 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 TMEM61Q8N0U2 210 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 CCDC54Q8NEL0 328 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 OR5H6Q8NGV6 325 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 OR2T29Q8NH02 315 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 C12orf57Q99622 126 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 REEP1Q9H902 201 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 COA4Q9NYJ1 87 aa3.6□□□□□ -1.83
CLIP1-207ENST00000536634 MRPS7Q9Y2R9 242 aaKnown RBP3.6□□□□□ -1.83
CLIP1-207ENST00000536634 LRP1Q07954 4544 aaKnown RBP3.59□□□□□ -1.83
CLIP1-207ENST00000536634 A0A0G2JLM5 398 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 METTL15A6NJ78 407 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 HSBP1L1C9JCN9 74 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 PPP5D1E7EU14 171 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 H0YJW9 148 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 H3BUA1 57 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 AIPO00170 330 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 GABRPO00591 440 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 GEMIN2O14893 280 aaKnown RBP3.59□□□□□ -1.83
CLIP1-207ENST00000536634 DEFB4AO15263 64 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 ORC5O43913 435 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 AIREO43918 545 aa3.59□□□□□ -1.83
CLIP1-207ENST00000536634 CCNKO75909 580 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms