RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 MARCH1Q8TCQ1 289 aa10.66□□□□□ -0.7
RTN3P1-201ENST00000536295 CSMD3Q7Z407 3707 aa10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 TENM2Q9NT68 2774 aa10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 IGHV3-49A0A0A0MS15 119 aa10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 A0A0B4J293 547 aa10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 K7EMT4 169 aa10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 TSPAN4O14817 238 aa10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 ST8SIA3O43173 380 aa10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 GNG7O60262 68 aa10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 ATG12O94817 140 aa10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 IFNA17P01571 189 aa10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 SNCAP37840 140 aa10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 RNASE11Q8TAA1 199 aaKnown RBP10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 PDCD10Q9BUL8 212 aa10.65□□□□□ -0.7
RTN3P1-201ENST00000536295 LCE6AA0A183 80 aa10.64□□□□□ -0.71
RTN3P1-201ENST00000536295 C15orf62A8K5M9 175 aa10.64□□□□□ -0.71
RTN3P1-201ENST00000536295 CTSDP07339 412 aaPredicted RBP10.64□□□□□ -0.71
RTN3P1-201ENST00000536295 P0C879 139 aa10.64□□□□□ -0.71
RTN3P1-201ENST00000536295 HOXA1P49639 335 aaPredicted RBP10.64□□□□□ -0.71
RTN3P1-201ENST00000536295 IL18Q14116 193 aa10.64□□□□□ -0.71
RTN3P1-201ENST00000536295 ZNF414Q96IQ9 312 aa10.64□□□□□ -0.71
RTN3P1-201ENST00000536295 TXN2Q99757 166 aa10.64□□□□□ -0.71
RTN3P1-201ENST00000536295 SMPXQ9UHP9 88 aa10.64□□□□□ -0.71
RTN3P1-201ENST00000536295 SACSQ9NZJ4 4579 aa10.64□□□□□ -0.71
RTN3P1-201ENST00000536295 IGKV3-7A0A075B6H7 116 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 IGHV3OR16-13A0A075B7E8 117 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 IGHV3-74A0A0B4J1X5 117 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 A0A0G2JRQ6 117 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 IGHV7-4-1A0A0J9YVY3 117 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 OR4C46A6NHA9 309 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 ETV6P41212 452 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 TFPI2P48307 235 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 MRPS10P82664 201 aaKnown RBP10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 ODF3L2Q3SX64 289 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 TMEM116Q8NCL8 245 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 RRNAD1Q96FB5 475 aaKnown RBP10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 DIRAS2Q96HU8 199 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 RNF2Q99496 336 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 OVOL2Q9BRP0 275 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 RHPN1-AS1Q9BWJ2 59 aa10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 NXF2Q9GZY0 626 aaKnown RBP10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 C14orf166Q9Y224 244 aaKnown RBP10.63□□□□□ -0.71
RTN3P1-201ENST00000536295 TEX13DA0A0J9YY54 714 aaPredicted RBP10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 DISC1C4P0D8 188 aa10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 CHEK1O14757 476 aa10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 OR5AC1P0C628 307 aa10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 UCP1P25874 307 aa10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 FCGR2BP31994 310 aaPredicted RBP10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 SSBP1Q04837 148 aaKnown RBP10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 MEF2DQ14814 521 aa10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 DUSP18Q8NEJ0 188 aa10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 IL17DQ8TAD2 202 aa10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 RAB2BQ8WUD1 216 aa10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 SMIM4Q8WVI0 70 aa10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 LYSTQ99698 3801 aa10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 C6orf62Q9GZU0 229 aaPredicted RBP10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 ENY2Q9NPA8 101 aa10.62□□□□□ -0.71
RTN3P1-201ENST00000536295 TRAV14DV4A0A0A6YYC5 116 aa10.61□□□□□ -0.71
RTN3P1-201ENST00000536295 AKAIN1P0CW23 69 aa10.61□□□□□ -0.71
RTN3P1-201ENST00000536295 RNASE2P10153 161 aaKnown RBP10.61□□□□□ -0.71
RTN3P1-201ENST00000536295 RPL35AP18077 110 aaKnown RBP10.61□□□□□ -0.71
RTN3P1-201ENST00000536295 NPBWR1P48145 328 aa10.61□□□□□ -0.71
RTN3P1-201ENST00000536295 APOC4P55056 127 aa10.61□□□□□ -0.71
RTN3P1-201ENST00000536295 OR4C16Q8NGL9 310 aa10.61□□□□□ -0.71
RTN3P1-201ENST00000536295 DYNC2LI1Q8TCX1 351 aa10.61□□□□□ -0.71
RTN3P1-201ENST00000536295 OR10C1Q96KK4 312 aa10.61□□□□□ -0.71
RTN3P1-201ENST00000536295 RTBDNQ9BSG5 229 aaPredicted RBP10.61□□□□□ -0.71
RTN3P1-201ENST00000536295 TMEM222Q9H0R3 208 aa10.61□□□□□ -0.71
RTN3P1-201ENST00000536295 CCDC59Q9P031 241 aaKnown RBP10.61□□□□□ -0.71
RTN3P1-201ENST00000536295 NOL3O60936 208 aaKnown RBP10.6□□□□□ -0.71
RTN3P1-201ENST00000536295 B3GALNT1O75752 331 aa10.6□□□□□ -0.71
RTN3P1-201ENST00000536295 SUB1P53999 127 aaKnown RBP eCLIP10.6□□□□□ -0.71
RTN3P1-201ENST00000536295 TMBIM6P55061 237 aa10.6□□□□□ -0.71
RTN3P1-201ENST00000536295 DEFB135Q30KP9 77 aa10.6□□□□□ -0.71
RTN3P1-201ENST00000536295 TOMM20LQ6UXN7 152 aa10.6□□□□□ -0.71
RTN3P1-201ENST00000536295 Q6ZRM9 215 aa10.6□□□□□ -0.71
RTN3P1-201ENST00000536295 APRG1Q8IVJ8 170 aa10.6□□□□□ -0.71
RTN3P1-201ENST00000536295 GBGT1Q8N5D6 347 aa10.6□□□□□ -0.71
RTN3P1-201ENST00000536295 LHFPL5Q8TAF8 219 aa10.6□□□□□ -0.71
RTN3P1-201ENST00000536295 NAA60Q9H7X0 242 aa10.6□□□□□ -0.71
RTN3P1-201ENST00000536295 IGHV3-66A0A0C4DH42 116 aa10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 INS-IGF2F8WCM5 200 aa10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 CORTO00230 105 aa10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 CTDSPLO15194 276 aa10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 CDS2O95674 445 aa10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 OPRK1P41145 380 aa10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 SURF2Q15527 256 aaPredicted RBP10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 ZNF124Q15973 351 aa10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 MLANAQ16655 118 aa10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 ZNF600Q6ZNG1 722 aa10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 OR51S1Q8NGJ8 323 aa10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 GLYATL2Q8WU03 294 aa10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 GINS3Q9BRX5 216 aa10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 PUS1Q9Y606 427 aaKnown RBP eCLIP10.59□□□□□ -0.71
RTN3P1-201ENST00000536295 CRYM-AS1A6NIL9 109 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 SPRY2O43597 315 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 NXPH3O95157 252 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 TMEM50AO95807 157 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 APOHP02749 345 aaPredicted RBP10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 DHODHQ02127 395 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms