RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SVILO95425 2214 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 LOC400499M0QZD8 3231 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 ADAMTS9Q9P2N4 1935 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 SAA2-SAA4A0A096LPE2 208 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 IGKV1-12A0A0C4DH73 117 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 OR11H12B2RN74 326 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 H3BML4 177 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 ACTL6BO94805 426 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 MT-ATP6P00846 226 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 IGKV1D-12P01611 117 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 CCNOP22674 350 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 CD27P26842 260 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 CMPK1P30085 196 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 WASP42768 502 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 MFAP2P55001 183 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 PPP1CAP62136 330 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 PLP2Q04941 152 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 RNPS1Q15287 305 aaKnown RBP3.07□□□□□ -1.92
MCF2-210ENST00000536274 TRIP6Q15654 476 aaKnown RBP3.07□□□□□ -1.92
MCF2-210ENST00000536274 C3orf36Q3SXR2 165 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 TRAT1Q6PIZ9 186 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 C16orf47Q6ZP98 133 aaPredicted RBP3.07□□□□□ -1.92
MCF2-210ENST00000536274 Q6ZSR6 202 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 OR11H1Q8NG94 326 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 OR11H2Q8NH07 326 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 C16orf52Q8NHV5 167 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 LRRC29Q8WV35 223 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 SSMEM1Q8WWF3 244 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 IL1F10Q8WWZ1 152 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 ZNF764Q96H86 408 aaPredicted RBP3.07□□□□□ -1.92
MCF2-210ENST00000536274 AJUBAQ96IF1 538 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 DGAT2Q96PD7 388 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 IL36GQ9NZH8 169 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 VPREB3Q9UKI3 123 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 PIGLQ9Y2B2 252 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 INSIG2Q9Y5U4 225 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 ARHGEF17Q96PE2 2063 aaPredicted RBP3.07□□□□□ -1.92
MCF2-210ENST00000536274 SEC16AO15027 2179 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 TRGV10A0A0A0MS01 117 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 A0A1W2PRE2 83 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 CD300LBA8K4G0 201 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 OR7C1O76099 320 aaPredicted RBP3.07□□□□□ -1.92
MCF2-210ENST00000536274 LEPROTL1O95214 131 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 IGKV1-5P01602 117 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 FAM106CPP0CH98 169 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 CA6P23280 308 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 ACP1P24666 158 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 OR1D4P47884 311 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 NMUP48645 174 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 CYB561P49447 251 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 SERF2P84101 59 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 KRTAP21-3Q3LHN1 58 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 FAM106AQ4KMX7 169 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 CENPWQ5EE01 88 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 ZNF766Q5HY98 468 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 Q96M66 194 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 SPIN2AQ99865 258 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 SPIN2BQ9BPZ2 258 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 ZNF331Q9NQX6 463 aaPredicted RBP3.07□□□□□ -1.92
MCF2-210ENST00000536274 ZNF355PQ9NSJ1 428 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 PLEK2Q9NYT0 353 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 KCNIP1Q9NZI2 227 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 OR2W1Q9Y3N9 320 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 DSCAML1Q8TD84 2053 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 MUC3AQ02505 3323 aa3.07□□□□□ -1.92
MCF2-210ENST00000536274 SMG1Q96Q15 3661 aaKnown RBP3.07□□□□□ -1.92
MCF2-210ENST00000536274 IGKV1-6A0A0C4DH72 117 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 A0A1B0GWB2 263 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 J3QKU1 62 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 J3QR06 171 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 TMPRSS2O15393 492 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 PAX4O43316 350 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 ZG16O60844 167 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 PDCD6O75340 191 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 PGLYRP1O75594 196 aaPredicted RBP3.06□□□□□ -1.92
MCF2-210ENST00000536274 IGHV3-7P01780 117 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 AMY1AP04745 511 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 SMIM17P0DL12 118 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 CX3CL1P78423 397 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 MIC13Q5XKP0 118 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 COLCA1Q6ZS62 124 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 NFE4Q86UQ8 179 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 CCDC71LQ8N9Z2 235 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 OR5A2Q8NGI9 324 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 CCL4L1Q8NHW4 92 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 LSM10Q969L4 123 aaKnown RBP3.06□□□□□ -1.92
MCF2-210ENST00000536274 NPCDR1Q9BY65 106 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 NHP2Q9NX24 153 aaKnown RBP3.06□□□□□ -1.92
MCF2-210ENST00000536274 PILRAQ9UKJ1 303 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 RELNP78509 3460 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 A0A1W2PPV4 95 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 DEGS1O15121 323 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 FASLGP48023 281 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 OR8B8Q15620 311 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 Q6ZUT4 128 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 DEFB124Q8NES8 71 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 PATE1Q8WXA2 126 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 MBD6Q96DN6 1003 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 VSTM2LQ96N03 204 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 GPR82Q96P67 336 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms