RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 TMEM170AQ8WVE7 144 aa13.66□□□□□ -0.22
DDX55-204ENST00000536079 ZNF414Q96IQ9 312 aa13.66□□□□□ -0.22
DDX55-204ENST00000536079 MCRIP2Q9BUT9 160 aaKnown RBP13.66□□□□□ -0.22
DDX55-204ENST00000536079 NUDT15Q9NV35 164 aa13.66□□□□□ -0.22
DDX55-204ENST00000536079 A0A1B0GU03 582 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 DUXBA0A1W2PPF3 345 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 GPR183P32249 361 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 ARL3P36405 182 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 TNFRSF9Q07011 255 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 EGFEM1PQ0D2K5 195 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 MLANAQ16655 118 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 RPEL1Q2QD12 228 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 BSXQ3C1V8 233 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 C4orf46Q504U0 113 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 ACSM6Q6P461 480 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 VN1R17PQ8TDU5 208 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 CXorf58Q96LI9 332 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 SEC22CQ9BRL7 303 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 RBKSQ9H477 322 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 THYN1Q9P016 225 aa13.65□□□□□ -0.22
DDX55-204ENST00000536079 TRBV7-1A0A0A6YYK4 115 aa13.64□□□□□ -0.23
DDX55-204ENST00000536079 FAM240BA0A1B0GVZ2 78 aa13.64□□□□□ -0.23
DDX55-204ENST00000536079 CEBPZOSA8MTT3 80 aa13.64□□□□□ -0.23
DDX55-204ENST00000536079 MT-CO2P00403 227 aa13.64□□□□□ -0.23
DDX55-204ENST00000536079 C9orf66Q5T8R8 295 aa13.64□□□□□ -0.23
DDX55-204ENST00000536079 AURKAIP1Q9NWT8 199 aaPredicted RBP13.64□□□□□ -0.23
DDX55-204ENST00000536079 C21orf62Q9NYP8 219 aa13.64□□□□□ -0.23
DDX55-204ENST00000536079 MRPL36Q9P0J6 103 aaKnown RBP13.64□□□□□ -0.23
DDX55-204ENST00000536079 HSPB7Q9UBY9 170 aa13.64□□□□□ -0.23
DDX55-204ENST00000536079 IGHV3-35A0A0C4DH35 117 aa13.63□□□□□ -0.23
DDX55-204ENST00000536079 OR2T8A6NH00 312 aa13.63□□□□□ -0.23
DDX55-204ENST00000536079 GGCTO75223 188 aaKnown RBP13.63□□□□□ -0.23
DDX55-204ENST00000536079 H2AFB2P0C5Z0 115 aa13.63□□□□□ -0.23
DDX55-204ENST00000536079 SNCAP37840 140 aa13.63□□□□□ -0.23
DDX55-204ENST00000536079 MZT2BQ6NZ67 158 aa13.63□□□□□ -0.23
DDX55-204ENST00000536079 ADAMTSL5Q6ZMM2 481 aa13.63□□□□□ -0.23
DDX55-204ENST00000536079 OR1L6Q8NGR2 347 aa13.63□□□□□ -0.23
DDX55-204ENST00000536079 OR1S1Q8NH92 325 aa13.63□□□□□ -0.23
DDX55-204ENST00000536079 PINX1Q96BK5 328 aaKnown RBP13.63□□□□□ -0.23
DDX55-204ENST00000536079 CHRDL1Q9BU40 450 aa13.63□□□□□ -0.23
DDX55-204ENST00000536079 FNDC4Q9H6D8 234 aaPredicted RBP13.63□□□□□ -0.23
DDX55-204ENST00000536079 ENY2Q9NPA8 101 aa13.63□□□□□ -0.23
DDX55-204ENST00000536079 TMED3Q9Y3Q3 217 aa13.63□□□□□ -0.23
DDX55-204ENST00000536079 PRKDCP78527 4128 aaKnown RBP13.63□□□□□ -0.23
DDX55-204ENST00000536079 SAP30O75446 220 aa13.62□□□□□ -0.23
DDX55-204ENST00000536079 CSN3P07498 182 aa13.62□□□□□ -0.23
DDX55-204ENST00000536079 ADMP35318 185 aa13.62□□□□□ -0.23
DDX55-204ENST00000536079 UNQ9165/PRO28630Q6UXU0 137 aa13.62□□□□□ -0.23
DDX55-204ENST00000536079 NRARPQ7Z6K4 114 aa13.62□□□□□ -0.23
DDX55-204ENST00000536079 OR9G4Q8NGQ1 327 aa13.62□□□□□ -0.23
DDX55-204ENST00000536079 MITD1Q8WV92 249 aa13.62□□□□□ -0.23
DDX55-204ENST00000536079 HEYLQ9NQ87 328 aaPredicted RBP13.62□□□□□ -0.23
DDX55-204ENST00000536079 WI2-2373I1.2A0A1W2PRP0 233 aa13.61□□□□□ -0.23
DDX55-204ENST00000536079 CYB5BO43169 146 aa13.61□□□□□ -0.23
DDX55-204ENST00000536079 TGOLN2O43493 480 aa13.61□□□□□ -0.23
DDX55-204ENST00000536079 SLC25A6P12236 298 aa13.61□□□□□ -0.23
DDX55-204ENST00000536079 UBAC2Q8NBM4 344 aa13.61□□□□□ -0.23
DDX55-204ENST00000536079 COQ8AQ8NI60 647 aa13.61□□□□□ -0.23
DDX55-204ENST00000536079 SPNP16150 400 aa13.6□□□□□ -0.23
DDX55-204ENST00000536079 FAM209BQ5JX69 171 aa13.6□□□□□ -0.23
DDX55-204ENST00000536079 GPHB5Q86YW7 130 aa13.6□□□□□ -0.23
DDX55-204ENST00000536079 DTD1Q8TEA8 209 aa13.6□□□□□ -0.23
DDX55-204ENST00000536079 OR10C1Q96KK4 312 aa13.6□□□□□ -0.23
DDX55-204ENST00000536079 GPR61Q9BZJ8 451 aa13.6□□□□□ -0.23
DDX55-204ENST00000536079 MAGT1Q9H0U3 335 aa13.6□□□□□ -0.23
DDX55-204ENST00000536079 SELENOKQ9Y6D0 94 aa13.6□□□□□ -0.23
DDX55-204ENST00000536079 K7EIL1 84 aa13.59□□□□□ -0.23
DDX55-204ENST00000536079 CCSO14618 274 aa13.59□□□□□ -0.23
DDX55-204ENST00000536079 CTSGP08311 255 aa13.59□□□□□ -0.23
DDX55-204ENST00000536079 IAPPP10997 89 aa13.59□□□□□ -0.23
DDX55-204ENST00000536079 HTR2BP41595 481 aa13.59□□□□□ -0.23
DDX55-204ENST00000536079 C2orf83Q53S99 150 aa13.59□□□□□ -0.23
DDX55-204ENST00000536079 Q56UQ5 140 aa13.59□□□□□ -0.23
DDX55-204ENST00000536079 PLET1Q6UQ28 207 aa13.59□□□□□ -0.23
DDX55-204ENST00000536079 DUSP18Q8NEJ0 188 aa13.59□□□□□ -0.23
DDX55-204ENST00000536079 SLC24A4Q8NFF2 622 aa13.59□□□□□ -0.23
DDX55-204ENST00000536079 ENKURQ8TC29 256 aa13.59□□□□□ -0.23
DDX55-204ENST00000536079 ZNF431Q8TF32 576 aaPredicted RBP13.59□□□□□ -0.23
DDX55-204ENST00000536079 SUB1P53999 127 aaKnown RBP eCLIP13.58□□□□□ -0.24
DDX55-204ENST00000536079 MFAP4P55083 255 aa13.58□□□□□ -0.24
DDX55-204ENST00000536079 REC114Q7Z4M0 266 aa13.58□□□□□ -0.24
DDX55-204ENST00000536079 OR4D5Q8NGN0 318 aa13.58□□□□□ -0.24
DDX55-204ENST00000536079 CACNG8Q8WXS5 425 aa13.58□□□□□ -0.24
DDX55-204ENST00000536079 BSCL2Q96G97 398 aaPredicted RBP13.58□□□□□ -0.24
DDX55-204ENST00000536079 OR4C12Q96R67 309 aa13.58□□□□□ -0.24
DDX55-204ENST00000536079 PRR25Q96S07 402 aa13.58□□□□□ -0.24
DDX55-204ENST00000536079 ELOVL1Q9BW60 279 aa13.58□□□□□ -0.24
DDX55-204ENST00000536079 ZNF436Q9C0F3 470 aaPredicted RBP13.58□□□□□ -0.24
DDX55-204ENST00000536079 IGHV3OR16-8A0A075B7F1 116 aa13.57□□□□□ -0.24
DDX55-204ENST00000536079 PIGBOS1A0A0B4J2F0 54 aa13.57□□□□□ -0.24
DDX55-204ENST00000536079 ZNF320A2RRD8 509 aa13.57□□□□□ -0.24
DDX55-204ENST00000536079 TMEM213A2RRL7 107 aa13.57□□□□□ -0.24
DDX55-204ENST00000536079 C2orf70A6NJV1 201 aa13.57□□□□□ -0.24
DDX55-204ENST00000536079 LGALS9O00182 355 aa13.57□□□□□ -0.24
DDX55-204ENST00000536079 NPY1RP25929 384 aa13.57□□□□□ -0.24
DDX55-204ENST00000536079 FCGR2BP31994 310 aaPredicted RBP13.57□□□□□ -0.24
DDX55-204ENST00000536079 INSL3P51460 131 aa13.57□□□□□ -0.24
DDX55-204ENST00000536079 TM4SF20Q53R12 229 aa13.57□□□□□ -0.24
DDX55-204ENST00000536079 UXS1Q8NBZ7 420 aa13.57□□□□□ -0.24
DDX55-204ENST00000536079 HIPK2Q9H2X6 1198 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms