RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 TMEM30BQ3MIR4 351 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 CT45A1Q5HYN5 189 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 SLC25A48Q6ZT89 311 aaKnown RBP6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 C18orf65Q6ZTR6 163 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 HOGA1Q86XE5 327 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 GAPTQ8N292 157 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 FAM71E2Q8N5Q1 922 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 WFDC9Q8NEX5 89 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 OR51D1Q8NGF3 324 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 OR1P1Q8NH06 330 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 CT45A3Q8NHU0 189 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 MRPL30Q8TCC3 161 aaKnown RBP6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 CD300LFQ8TDQ1 290 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 ORAOV1Q8WV07 137 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 ST6GALNAC6Q969X2 333 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 FAM3DQ96BQ1 224 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 RBMXL1Q96E39 390 aaKnown RBP6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 TVP23CQ96ET8 276 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 URM1Q9BTM9 101 aaKnown RBP6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 EIF5A2Q9GZV4 153 aaKnown RBP6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 OR2S2Q9NQN1 319 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 KCNIP1Q9NZI2 227 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 OR5AC2Q9NZP5 309 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 ANAPC10Q9UM13 185 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 DNAH3Q8TD57 4116 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 TMEM235A6NFC5 223 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 LINC01548A6NM66 108 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 H3BQ15 152 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 CCSO14618 274 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 LDLRAD4O15165 306 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 SFT2D2O95562 160 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 NPSP0C0P6 89 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 VSIG8P0DPA2 414 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 CD1BP29016 333 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 PPP1CCP36873 323 aaKnown RBP6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 TAGLN2P37802 199 aaKnown RBP6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 GPR12P47775 334 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 ZNF134P52741 427 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 ZNF137PP52743 207 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 UBE2KP61086 200 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 SELENOTP62341 195 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 MORN2Q502X0 79 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 COL5A1-AS1Q5SY13 56 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 LEMD1Q68G75 181 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 RPL7L1Q6DKI1 246 aaKnown RBP6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 DPPA3Q6W0C5 159 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 C8orf86Q6ZUL3 223 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 Q8N6K4 173 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 SLC35G3Q8N808 338 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 Q8N9W7 124 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 KLHL30-AS1Q8NEE0 82 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 OR52L2PQ8NGH6 319 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 ABHD5Q8WTS1 349 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 TMEM18Q96B42 140 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 BTF3L4Q96K17 158 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 RASL11BQ9BPW5 248 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 ABHD14AQ9BUJ0 271 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 TMEM59Q9BXS4 323 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 KCNK15Q9H427 330 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 SRD5A3Q9H8P0 318 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 MBNL3Q9NUK0 354 aaKnown RBP6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 LIN7CQ9NUP9 197 aaKnown RBP6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 JPT1Q9UK76 154 aa6.73□□□□□ -1.33
SFSWAP-202ENST00000535202 MSGN1A6NI15 193 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 TRGC2P03986 189 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 IL6RP08887 468 aaPredicted RBP6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 PTHLHP12272 177 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 OR10J1P30954 320 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 ECI1P42126 302 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 P2RY1P47900 373 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 CAMLGP49069 296 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 THBS3P49746 956 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 C2orf76Q3KRA6 126 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 VAX1Q5SQQ9 334 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 C1orf100Q5SVJ3 147 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 C6orf201Q7Z4U5 140 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 MRPL41Q8IXM3 137 aaKnown RBP6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 LINC00482Q8N8I6 264 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 FRZBQ92765 325 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 IMMP2LQ96T52 175 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 S1PR3Q99500 378 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 HSPB9Q9BQS6 159 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 PYGO2Q9BRQ0 406 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 MIEN1Q9BRT3 115 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 NIPSNAP3BQ9BS92 247 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 ATG101Q9BSB4 218 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 NICN1Q9BSH3 213 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 FAAP24Q9BTP7 215 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 SEPSECSQ9HD40 501 aaKnown RBP6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 KIAA1456Q9P272 454 aa6.72□□□□□ -1.33
SFSWAP-202ENST00000535202 C13orf42A0A1B0GVH6 325 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 M0QYG6 137 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 AGPAT2O15120 278 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 CYB5BO43169 146 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 YPEL1O60688 119 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 BPNT1O95861 308 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 HBE1P02100 147 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 CXCL1P09341 107 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 VDAC1P21796 283 aa6.71□□□□□ -1.34
SFSWAP-202ENST00000535202 BLVRBP30043 206 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms