RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 SNCAP37840 140 aa9.98□□□□□ -0.81
CAPN1-228ENST00000534373 RPL5P46777 297 aaKnown RBP9.98□□□□□ -0.81
CAPN1-228ENST00000534373 SUB1P53999 127 aaKnown RBP eCLIP9.98□□□□□ -0.81
CAPN1-228ENST00000534373 APOC4P55056 127 aa9.98□□□□□ -0.81
CAPN1-228ENST00000534373 CMC4P56277 68 aaPredicted RBP9.98□□□□□ -0.81
CAPN1-228ENST00000534373 MEF2DQ14814 521 aa9.98□□□□□ -0.81
CAPN1-228ENST00000534373 PVRIGQ6DKI7 326 aa9.98□□□□□ -0.81
CAPN1-228ENST00000534373 STEAP1BQ6NZ63 245 aa9.98□□□□□ -0.81
CAPN1-228ENST00000534373 TP53RKQ96S44 253 aa9.98□□□□□ -0.81
CAPN1-228ENST00000534373 TP53TG1Q9Y2A0 90 aa9.98□□□□□ -0.81
CAPN1-228ENST00000534373 TRAV14DV4A0A0A6YYC5 116 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 KIR2DL5BA0A0G2JN68 375 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 KIR2DL5BA0A0G2JPC4 375 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 IGHV7-4-1A0A0J9YVY3 117 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 CORTO00230 105 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 RGS5O15539 181 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 GNG7O60262 68 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 IFNA17P01571 189 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 IGKV1-5P01602 117 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 CTSDP07339 412 aaPredicted RBP9.97□□□□□ -0.81
CAPN1-228ENST00000534373 PI3P19957 117 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 UCP1P25874 307 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 NPBWR1P48145 328 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 AKR1C2P52895 323 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 SPCS2Q15005 226 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 SURF2Q15527 256 aaPredicted RBP9.97□□□□□ -0.81
CAPN1-228ENST00000534373 RNASE12Q5GAN4 147 aaKnown RBP9.97□□□□□ -0.81
CAPN1-228ENST00000534373 Q6ZWC4 215 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 WFDC3Q8IUB2 231 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 FAM219AQ8IW50 185 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 KIR2DL5AQ8N109 375 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 TMEM116Q8NCL8 245 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 DUSP18Q8NEJ0 188 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 OR4D10Q8NGI6 311 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 KIR2DL5BQ8NHK3 375 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 RAB2BQ8WUD1 216 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 RRNAD1Q96FB5 475 aaKnown RBP9.97□□□□□ -0.81
CAPN1-228ENST00000534373 BCL7BQ9BQE9 202 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 OVOL2Q9BRP0 275 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 PDCD10Q9BUL8 212 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 MIXL1Q9H2W2 232 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 RYR2Q92736 4967 aa9.97□□□□□ -0.81
CAPN1-228ENST00000534373 CCDC160A6NGH7 325 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 CTDSP2O14595 271 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 CHEK1O14757 476 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 CTDSPLO15194 276 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 ST8SIA3O43173 380 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 YIF1AO95070 293 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 BMI1P35226 326 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 TRIM16LQ309B1 348 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 SCGB2B2Q4G0G5 96 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 SLC35G3Q8N808 338 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 OR13C8Q8NGS7 320 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 PINX1Q96BK5 328 aaKnown RBP9.96□□□□□ -0.82
CAPN1-228ENST00000534373 ZNF414Q96IQ9 312 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 LYSTQ99698 3801 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 GINS3Q9BRX5 216 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 RHPN1-AS1Q9BWJ2 59 aa9.96□□□□□ -0.82
CAPN1-228ENST00000534373 DISC1C4P0D8 188 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 CDS2O95674 445 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 PPP5CP53041 499 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 TMBIM6P55061 237 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 IZUMO4Q1ZYL8 232 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 ODF3L2Q3SX64 289 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 AARDQ4LEZ3 155 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 OR52E5Q8NH55 327 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 MARCH1Q8TCQ1 289 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 SMIM4Q8WVI0 70 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 GALNT14Q96FL9 552 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 RNF2Q99496 336 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 TMEM222Q9H0R3 208 aa9.95□□□□□ -0.82
CAPN1-228ENST00000534373 C14orf166Q9Y224 244 aaKnown RBP9.95□□□□□ -0.82
CAPN1-228ENST00000534373 IGHV3OR16-8A0A075B7F1 116 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 TEX13DA0A0J9YY54 714 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-228ENST00000534373 ZNF207O43670 478 aaKnown RBP9.94□□□□□ -0.82
CAPN1-228ENST00000534373 TMEM50AO95807 157 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 PAFAH1B2P68402 229 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 DHODHQ02127 395 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 SP6Q3SY56 376 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 FAM90A2PQ658T7 463 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 ZNF600Q6ZNG1 722 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 STPG3Q8N7X2 389 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 GLYATL2Q8WU03 294 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 DIRAS2Q96HU8 199 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 RTBDNQ9BSG5 229 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-228ENST00000534373 C6orf62Q9GZU0 229 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-228ENST00000534373 ENY2Q9NPA8 101 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-228ENST00000534373 CCDC59Q9P031 241 aaKnown RBP9.94□□□□□ -0.82
CAPN1-228ENST00000534373 CACFD1Q9UGQ2 172 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 UBQLN2Q9UHD9 624 aa9.94□□□□□ -0.82
CAPN1-228ENST00000534373 H3BMQ9 156 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 SPRY2O43597 315 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 SCGB2A1O75556 95 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 JTBO76095 146 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 AKAIN1P0CW23 69 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 RNASE2P10153 161 aaKnown RBP9.93□□□□□ -0.82
CAPN1-228ENST00000534373 ATF4P18848 351 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-228ENST00000534373 ETV6P41212 452 aa9.93□□□□□ -0.82
CAPN1-228ENST00000534373 SPCS3P61009 180 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms