RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 CT45A5P0DMU8 189 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 CT45A7P0DMV0 189 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 HIST1H1CP16403 213 aaKnown RBP3.34□□□□□ -1.87
CASP4-213ENST00000534356 PRKACAP17612 351 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 BMI1P35226 326 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 ARPC4P59998 168 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 KCNJ8Q15842 424 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 CT45A1Q5HYN5 189 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 TCF23Q7RTU1 214 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 SLC36A1Q7Z2H8 476 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 CYB561A3Q8NBI2 242 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 OR2T27Q8NH04 317 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 CT45A3Q8NHU0 189 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 ERMAPQ96PL5 475 aaPredicted RBP3.34□□□□□ -1.87
CASP4-213ENST00000534356 HDHD2Q9H0R4 259 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 SIGLEC7Q9Y286 467 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 COMMD3-BMI1R4GMX3 469 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 S4R3C0 116 aa3.34□□□□□ -1.87
CASP4-213ENST00000534356 HECTD4Q9Y4D8 3996 aa3.34□□□□□ -1.88
CASP4-213ENST00000534356 KBTBD11-OT1A0A1B0GTJ5 212 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 RFPL4AA6NLU0 287 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 NCBP2LA6PVI3 153 aaKnown RBP3.33□□□□□ -1.88
CASP4-213ENST00000534356 ODF3BA8MYP8 253 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 RFPL4AL1F8VTS6 287 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 ZNF701M0R085 212 aaPredicted RBP3.33□□□□□ -1.88
CASP4-213ENST00000534356 FXYD1O00168 92 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 CD74P04233 296 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 IL4P05112 153 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 GYPBP06028 91 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 RPSAP08865 295 aaKnown RBP3.33□□□□□ -1.88
CASP4-213ENST00000534356 PPIBP23284 216 aaKnown RBP3.33□□□□□ -1.88
CASP4-213ENST00000534356 KDELR2P33947 212 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 OMPP47874 163 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 MRPL19P49406 292 aaKnown RBP3.33□□□□□ -1.88
CASP4-213ENST00000534356 UBE2MP61081 183 aaKnown RBP3.33□□□□□ -1.88
CASP4-213ENST00000534356 CTAG1AP78358 180 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 PRDX4Q13162 271 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 DYNC1I2Q13409 638 aaKnown RBP3.33□□□□□ -1.88
CASP4-213ENST00000534356 TRAM2Q15035 370 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 MPV17L2Q567V2 206 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 MBOAT2Q6ZWT7 520 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 OR2W3Q7Z3T1 314 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 DCXRQ7Z4W1 244 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 MRPL55Q7Z7F7 128 aaKnown RBP3.33□□□□□ -1.88
CASP4-213ENST00000534356 OR8S1Q8NH09 359 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 LYPD6BQ8NI32 183 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 APH1BQ8WW43 257 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 OR5P3Q8WZ94 311 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 RNF170Q96K19 258 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 UQCC2Q9BRT2 126 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 TMEM109Q9BVC6 243 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 TLNRD1Q9H1K6 362 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 DNAJC27Q9NZQ0 273 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 STX18Q9P2W9 335 aaKnown RBP3.33□□□□□ -1.88
CASP4-213ENST00000534356 PRELID1Q9Y255 219 aa3.33□□□□□ -1.88
CASP4-213ENST00000534356 GMNCA6NCL1 334 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 A6NIN4 97 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 A8MUU9 505 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 C17orf98A8MV24 154 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 ZNF593O00488 134 aaPredicted RBP3.32□□□□□ -1.88
CASP4-213ENST00000534356 NDUFB2O95178 105 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 MBP02144 154 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 HCCSP53701 268 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 CAV3P56539 151 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 SYNJ2BPP57105 145 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 RPL31P62899 125 aaKnown RBP3.32□□□□□ -1.88
CASP4-213ENST00000534356 SELENOWP63302 87 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 CDK5Q00535 292 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 DIAPH2-AS1Q14236 149 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 PRR9Q5T870 116 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 SMARCD3Q6STE5 483 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 SPATA24Q86W54 205 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 OR11H7Q8NGC8 314 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 RPS4Y2Q8TD47 263 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 SLAMF6Q96DU3 332 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 REEP6Q96HR9 211 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 OR51I2Q9H344 312 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 CMTM6Q9NX76 183 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 ATPIF1Q9UII2 106 aa3.32□□□□□ -1.88
CASP4-213ENST00000534356 DNAH2Q9P225 4427 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 FAT2Q9NYQ8 4349 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 DHRS12A0PJE2 317 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 SEC14L6B5MCN3 397 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 ZNF682O95780 498 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 IGHV3-7P01780 117 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 ZNF688P0C7X2 276 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 STAG3L2P0CL84 134 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 SPNP16150 400 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 MYCNOSP40205 109 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 ZNF121P58317 390 aaPredicted RBP3.31□□□□□ -1.88
CASP4-213ENST00000534356 TAS2R31P59538 309 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 MAGOHP61326 146 aaKnown RBP3.31□□□□□ -1.88
CASP4-213ENST00000534356 KIR2DS1Q14954 304 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 HAGHLQ6PII5 290 aaPredicted RBP3.31□□□□□ -1.88
CASP4-213ENST00000534356 DRAM2Q6UX65 266 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 ANGPTL5Q86XS5 388 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 LINC00469Q8N7U9 141 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 OR8D4Q8NGM9 314 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 OR5K1Q8NHB7 308 aa3.31□□□□□ -1.88
CASP4-213ENST00000534356 SPTSSAQ969W0 71 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms