RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 hADV38S2A0JD32 116 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 IRGMA1A4Y4 181 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 A6NDN8 102 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 NCBP2LA6PVI3 153 aaKnown RBP2.67□□□□□ -1.98
CSMD3-210ENST00000534172 SHISA9B4DS77 424 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 J3KT08 172 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF253O75346 499 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 NDUFB6O95139 128 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 SOX14O95416 240 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 LIMS3P0CW19 117 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 LIMS4P0CW20 117 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 ELK1P19419 428 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 HINT1P49773 126 aaPredicted RBP2.67□□□□□ -1.98
CSMD3-210ENST00000534172 UBE2E1P51965 193 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF133P52736 654 aaPredicted RBP2.67□□□□□ -1.98
CSMD3-210ENST00000534172 DLX6P56179 175 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 H2BFSP57053 126 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 TPPP2P59282 170 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 ARG2P78540 354 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 PSG9Q00887 426 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 FAM27D1Q5T7N8 215 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 SPATA31B1PQ5VZV4 182 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 OPN5Q6U736 354 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 GLIPR1L1Q6UWM5 242 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 Q6ZSR6 202 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 TMEM150AQ86TG1 271 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 C1orf174Q8IYL3 243 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 SUMF2Q8NBJ7 301 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 SLC25A40Q8TBP6 338 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 SMIM4Q8WVI0 70 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 PPCDCQ96CD2 204 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 ZMYND19Q96E35 227 aaPredicted RBP2.67□□□□□ -1.98
CSMD3-210ENST00000534172 PGLYRP4Q96LB8 373 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 UBE2E2Q96LR5 201 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 SNRNP25Q9BV90 132 aaKnown RBP2.67□□□□□ -1.98
CSMD3-210ENST00000534172 SAMD10Q9BYL1 202 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 COA1Q9GZY4 146 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 KLF12Q9Y4X4 402 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 ATG2AQ2TAZ0 1938 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 PATJQ8NI35 1801 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 DOCK3Q8IZD9 2030 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 DLG5Q8TDM6 1919 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 BAZ2AQ9UIF9 1905 aaKnown RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 SHROOM3Q8TF72 1996 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 TRAV36DV7A0A075B6V5 113 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 ODAMA1E959 279 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 RBMY1BA6NDE4 496 aaKnown RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 RBMY1EA6NEQ0 496 aaKnown RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 TLCD2A6NGC4 264 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 C9JQL5 133 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 H7C1C5 153 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 K7EP34 96 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 M0R1X1 148 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 TAAR5O14804 337 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 KBTBD11O94819 623 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 PROSCO94903 275 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 SOD1P00441 154 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 APOA2P02652 100 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 RBMY1DP0C7P1 496 aaKnown RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 RBMY1A1P0DJD3 496 aaKnown RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF17P17021 662 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 FAUP35544 74 aaKnown RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 DAPP51397 102 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 BCL2L1Q07817 233 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 IL17AQ16552 155 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 SPATA45Q537H7 98 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 HBMQ6B0K9 141 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 PRSS41Q7RTY9 318 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 OSR2Q8N2R0 312 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 GPER1Q99527 375 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 NRTNQ99748 197 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 WDR61Q9GZS3 305 aaKnown RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 REEP1Q9H902 201 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 SPANXB1Q9NS25 103 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 DOCK5Q9H7D0 1870 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 DMXL1Q9Y485 3027 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 ABCA12Q86UK0 2595 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF860A6NHJ4 632 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 PHF1O43189 567 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 MOSP00540 346 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 CYBAP13498 195 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 IGLL1P15814 213 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 RPS4Y1P22090 263 aaKnown RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 LOXP28300 417 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 GRPRP30550 384 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 SRIP30626 198 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 GALR1P47211 349 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 LHX2P50458 406 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF83P51522 516 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 KRTAP10-6P60371 365 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 LCN6P62502 163 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 ADIRFQ15847 76 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 KLF17Q5JT82 389 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 OR2T5Q6IEZ7 315 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 SBSNQ6UWP8 590 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF429Q86V71 674 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 SLC25A42Q86VD7 318 aa2.66□□□□□ -1.98
CSMD3-210ENST00000534172 C17orf82Q86X59 251 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-210ENST00000534172 CDC20BQ86Y33 519 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms