RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 NXF2Q9GZY0 626 aaKnown RBP7.16□□□□□ -1.26
SSBP3-215ENST00000533946 GPR132Q9UNW8 380 aa7.16□□□□□ -1.26
SSBP3-215ENST00000533946 ANKRD20A5PA0PJZ0 165 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 TPPPO94811 219 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 DHFRP00374 187 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 CTSDP07339 412 aaPredicted RBP7.15□□□□□ -1.26
SSBP3-215ENST00000533946 TFPI2P48307 235 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 TMBIM6P55061 237 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 TAS2R19P59542 299 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 SUPT4H1P63272 117 aaKnown RBP7.15□□□□□ -1.26
SSBP3-215ENST00000533946 ZNF79Q15937 498 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 APRG1Q8IVJ8 170 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 FAM219AQ8IW50 185 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 CADM3Q8N126 398 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 ARRDC1Q8N5I2 433 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 OR52B4Q8NGK2 314 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 OR1P1Q8NH06 330 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 OR5B3Q8NH48 314 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 RBM38Q9H0Z9 239 aaKnown RBP7.15□□□□□ -1.26
SSBP3-215ENST00000533946 ZMAT4Q9H898 229 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 TECRQ9NZ01 308 aaKnown RBP7.15□□□□□ -1.26
SSBP3-215ENST00000533946 CCDC59Q9P031 241 aaKnown RBP7.15□□□□□ -1.26
SSBP3-215ENST00000533946 V9GYH0 126 aa7.15□□□□□ -1.26
SSBP3-215ENST00000533946 DNAH10Q8IVF4 4471 aa7.15□□□□□ -1.27
SSBP3-215ENST00000533946 FGF2P09038 288 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 RPL5P46777 297 aaKnown RBP7.14□□□□□ -1.27
SSBP3-215ENST00000533946 TRIM16LQ309B1 348 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 PVRIGQ6DKI7 326 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 LPCAT3Q6P1A2 487 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 TOMM20LQ6UXN7 152 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 FRAS1Q86XX4 4008 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 GBGT1Q8N5D6 347 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 OR2K2Q8NGT1 345 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 RAB2BQ8WUD1 216 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 ST8SIA2Q92186 375 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 BORCS5Q969J3 196 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 BSCL2Q96G97 398 aaPredicted RBP7.14□□□□□ -1.27
SSBP3-215ENST00000533946 OVOL2Q9BRP0 275 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 TMEM222Q9H0R3 208 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 NAA60Q9H7X0 242 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 ZFAND3Q9H8U3 227 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 FAM212BQ9NTI7 297 aaPredicted RBP7.14□□□□□ -1.27
SSBP3-215ENST00000533946 MRPL27Q9P0M9 148 aaKnown RBP7.14□□□□□ -1.27
SSBP3-215ENST00000533946 COPZ2Q9P299 210 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 SMPXQ9UHP9 88 aa7.14□□□□□ -1.27
SSBP3-215ENST00000533946 KMT2AQ03164 3969 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 TEX13DA0A0J9YY54 714 aaPredicted RBP7.13□□□□□ -1.27
SSBP3-215ENST00000533946 CRYM-AS1A6NIL9 109 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 C3orf84H3BNL1 204 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 NDUFA4O00483 81 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 CHEK1O14757 476 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 CTDSPLO15194 276 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 YIF1AO95070 293 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 CDS2O95674 445 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 TMEM50AO95807 157 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 IFNA17P01571 189 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 LYL1P12980 280 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 RPL35AP18077 110 aaKnown RBP7.13□□□□□ -1.27
SSBP3-215ENST00000533946 AKR1C2P52895 323 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 KLF9Q13886 244 aaPredicted RBP7.13□□□□□ -1.27
SSBP3-215ENST00000533946 TMEM187Q14656 261 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 TMEM268Q5VZI3 342 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 FAM90A2PQ658T7 463 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 LYZL2Q7Z4W2 148 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 ZNF114Q8NC26 417 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 MCFD2Q8NI22 146 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 TRIM63Q969Q1 353 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 ZNF486Q96H40 463 aaPredicted RBP7.13□□□□□ -1.27
SSBP3-215ENST00000533946 TMEM56Q96MV1 263 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 SPATA25Q9BR10 227 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 RHPN1-AS1Q9BWJ2 59 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 SLC2A8Q9NY64 477 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 CACNG5Q9UF02 275 aa7.13□□□□□ -1.27
SSBP3-215ENST00000533946 IGHV7-4-1A0A0J9YVY3 117 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 FABP12A6NFH5 140 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 NUPL2O15504 423 aaKnown RBP7.12□□□□□ -1.27
SSBP3-215ENST00000533946 GSTZ1O43708 216 aaPredicted RBP7.12□□□□□ -1.27
SSBP3-215ENST00000533946 IGKV1-17P01599 117 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 AKAIN1P0CW23 69 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 FCGR2BP31994 310 aaPredicted RBP7.12□□□□□ -1.27
SSBP3-215ENST00000533946 MFAP4P55083 255 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 TNFRSF9Q07011 255 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 BSXQ3C1V8 233 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 TIGITQ495A1 244 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 WFDC3Q8IUB2 231 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 SLC35G3Q8N808 338 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 OR1L6Q8NGR2 347 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 ZFAND1Q8TCF1 268 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 OR10C1Q96KK4 312 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 DAZ1Q9NQZ3 744 aaKnown RBP7.12□□□□□ -1.27
SSBP3-215ENST00000533946 FKBP11Q9NYL4 201 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 THYN1Q9P016 225 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 UFC1Q9Y3C8 167 aa7.12□□□□□ -1.27
SSBP3-215ENST00000533946 TSPAN4O14817 238 aa7.11□□□□□ -1.27
SSBP3-215ENST00000533946 DFFBO76075 338 aa7.11□□□□□ -1.27
SSBP3-215ENST00000533946 AKR1C4P17516 323 aa7.11□□□□□ -1.27
SSBP3-215ENST00000533946 TBPP20226 339 aa7.11□□□□□ -1.27
SSBP3-215ENST00000533946 HOXA1P49639 335 aaPredicted RBP7.11□□□□□ -1.27
SSBP3-215ENST00000533946 ELLP55199 621 aaPredicted RBP7.11□□□□□ -1.27
SSBP3-215ENST00000533946 RBMS2Q15434 407 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms