RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 NHLH2Q02577 135 aa8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 SLC38A11Q08AI6 406 aa8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 TMEM267Q0VDI3 215 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 CLINT1Q14677 625 aa8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 DEFB112Q30KQ8 113 aa8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 SPINK9Q5DT21 86 aa8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 OR8G2PQ6IF36 304 aa8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 LRRC20Q8TCA0 184 aa8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 SCGB1C1Q8TD33 95 aa8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 ZNF418Q8TF45 676 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 SRSF12Q8WXF0 261 aaKnown RBP8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 GNPNAT1Q96EK6 184 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 AJUBAQ96IF1 538 aa8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 RITA1Q96K30 269 aa8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 SMIM3Q9BZL3 60 aa8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 PRDM13Q9H4Q3 707 aa8.7□□□□□ -1.02
CCDC90B-218ENST00000533761 HLA-DRB1P01911 266 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 CD24P25063 80 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 CNTFRP26992 372 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 FXYD3Q14802 87 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 C2orf83Q53S99 150 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 ETFRF1Q6IPR1 90 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 Q6YL49 198 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 ETV3LQ6ZN32 361 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 ZNF680Q8NEM1 530 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 RNASEH2CQ8TDP1 164 aaKnown RBP8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 ABHD5Q8WTS1 349 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 SCARB1Q8WTV0 552 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 TMEM68Q96MH6 324 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 RBM14Q96PK6 669 aaKnown RBP8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 SLC25A33Q9BSK2 321 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 TMEM147Q9BVK8 224 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 UQCC1Q9NVA1 299 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 SOX21Q9Y651 276 aaPredicted RBP8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 FNDC10F2Z333 226 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 H3BUX3 64 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 SOX15O60248 233 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 MPDU1O75352 247 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 OR13C7P0DN81 318 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 RAB31Q13636 194 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 SIGLECL1Q8N7X8 197 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 ZNF114Q8NC26 417 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 SSMEM1Q8WWF3 244 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 ARPC1AQ92747 370 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 ZNF48Q96MX3 618 aaPredicted RBP8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 OR4C12Q96R67 309 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 JMJD8Q96S16 334 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 PARD6GQ9BYG4 376 aaPredicted RBP8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 KCNIP2Q9NS61 270 aa8.69□□□□□ -1.02
CCDC90B-218ENST00000533761 MDFIC2A0A1B0GVS7 189 aa8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 RPS10-NUDT3A0A1W2PQS6 291 aa8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 C15orf62A8K5M9 175 aa8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 DEFA4P12838 97 aa8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 IER3P46695 156 aa8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 PJVKQ0ZLH3 352 aa8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 EXOSC2Q13868 293 aaKnown RBP8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 BSXQ3C1V8 233 aa8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 RPL7L1Q6DKI1 246 aaKnown RBP8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 ZNF709Q8N972 641 aa8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 OR1P1Q8NH06 330 aa8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 CACNG8Q8WXS5 425 aa8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 THYN1Q9P016 225 aa8.68□□□□□ -1.02
CCDC90B-218ENST00000533761 C17orf112F2Z3M2 114 aa8.67□□□□□ -1.02
CCDC90B-218ENST00000533761 SEC11BP0C7V7 166 aa8.67□□□□□ -1.02
CCDC90B-218ENST00000533761 PAX6P26367 422 aa8.67□□□□□ -1.02
CCDC90B-218ENST00000533761 RAB5CP51148 216 aa8.67□□□□□ -1.02
CCDC90B-218ENST00000533761 DLK1P80370 383 aa8.67□□□□□ -1.02
CCDC90B-218ENST00000533761 Q8N9W7 124 aa8.67□□□□□ -1.02
CCDC90B-218ENST00000533761 RNF141Q8WVD5 230 aa8.67□□□□□ -1.02
CCDC90B-218ENST00000533761 CYTL1Q9NRR1 136 aa8.67□□□□□ -1.02
CCDC90B-218ENST00000533761 FBXO7Q9Y3I1 522 aa8.67□□□□□ -1.02
CCDC90B-218ENST00000533761 TNCP24821 2201 aa8.67□□□□□ -1.02
CCDC90B-218ENST00000533761 SETD2Q9BYW2 2564 aaPredicted RBP8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 IGLC7A0M8Q6 106 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 UMAD1C9J7I0 102 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 HOXA3O43365 443 aaPredicted RBP8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 TCF21O43680 179 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 SCGB2A1O75556 95 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 GPX4P36969 197 aaPredicted RBP8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 HILS1P60008 231 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 CX3CL1P78423 397 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 IFITM2Q01629 132 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 WT1-ASQ06250 92 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 NDUFA5Q16718 116 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 KRTAP19-4Q3LI73 84 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 C10orf55Q5SWW7 151 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 TMEM86BQ8N661 226 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 C5orf56Q8N8D9 126 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 OR10W1Q8NGF6 305 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 SLC35E1Q96K37 410 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 GINS3Q9BRX5 216 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 SLC25A32Q9H2D1 315 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 NPVFQ9HCQ7 196 aa8.66□□□□□ -1.02
CCDC90B-218ENST00000533761 UBE2L5PA0A1B0GUS4 154 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 SMCO3A2RU48 225 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 NPIPB5A8MRT5 1133 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 CLDN34H7C241 214 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 IGHV4-59P01825 116 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 S100A6P06703 90 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 RNASE2P10153 161 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms