RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 DISC1C4P0D8 188 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 F8W735 103 aaPredicted RBP7.82□□□□□ -1.16
CAPN1-225ENST00000533704 ST8SIA3O43173 380 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 ATP6V1G1O75348 118 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 CD74P04233 296 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 CTSDP07339 412 aaPredicted RBP7.82□□□□□ -1.16
CAPN1-225ENST00000533704 C8orf88P0DMB2 117 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 SNCAP37840 140 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 RPL5P46777 297 aaKnown RBP7.82□□□□□ -1.16
CAPN1-225ENST00000533704 HOXA1P49639 335 aaPredicted RBP7.82□□□□□ -1.16
CAPN1-225ENST00000533704 MRPS10P82664 201 aaKnown RBP7.82□□□□□ -1.16
CAPN1-225ENST00000533704 MEF2DQ14814 521 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 LAMTOR1Q6IAA8 161 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 DYNC2LI1Q8TCX1 351 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 RRNAD1Q96FB5 475 aaKnown RBP7.82□□□□□ -1.16
CAPN1-225ENST00000533704 HIPK2Q9H2X6 1198 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 C5orf66Q9H5L9 145 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 EDA2RQ9HAV5 297 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 ENY2Q9NPA8 101 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 GAR1Q9NY12 217 aaKnown RBP7.82□□□□□ -1.16
CAPN1-225ENST00000533704 CCDC59Q9P031 241 aaKnown RBP7.82□□□□□ -1.16
CAPN1-225ENST00000533704 UBQLN2Q9UHD9 624 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 A0A0B4J293 547 aa7.81□□□□□ -1.16
CAPN1-225ENST00000533704 CCDC160A6NGH7 325 aa7.81□□□□□ -1.16
CAPN1-225ENST00000533704 I3L2K1 104 aa7.81□□□□□ -1.16
CAPN1-225ENST00000533704 GNG7O60262 68 aa7.81□□□□□ -1.16
CAPN1-225ENST00000533704 HNRNPCP07910 306 aaKnown RBP eCLIP7.81□□□□□ -1.16
CAPN1-225ENST00000533704 CTSGP08311 255 aa7.81□□□□□ -1.16
CAPN1-225ENST00000533704 OR5AC1P0C628 307 aa7.81□□□□□ -1.16
CAPN1-225ENST00000533704 AKAIN1P0CW23 69 aa7.81□□□□□ -1.16
CAPN1-225ENST00000533704 ETV6P41212 452 aa7.81□□□□□ -1.16
CAPN1-225ENST00000533704 TMBIM6P55061 237 aa7.81□□□□□ -1.16
CAPN1-225ENST00000533704 SSBP1Q04837 148 aaKnown RBP7.81□□□□□ -1.16
CAPN1-225ENST00000533704 RELQ04864 619 aaPredicted RBP7.81□□□□□ -1.16
CAPN1-225ENST00000533704 LINC00322Q6ZN03 302 aaPredicted RBP7.81□□□□□ -1.16
CAPN1-225ENST00000533704 ZBTB8BQ8NAP8 495 aaPredicted RBP7.81□□□□□ -1.16
CAPN1-225ENST00000533704 ZNF114Q8NC26 417 aa7.81□□□□□ -1.16
CAPN1-225ENST00000533704 OR4C16Q8NGL9 310 aa7.81□□□□□ -1.16
CAPN1-225ENST00000533704 SMIM4Q8WVI0 70 aa7.81□□□□□ -1.16
CAPN1-225ENST00000533704 IGKV3-7A0A075B6H7 116 aa7.8□□□□□ -1.16
CAPN1-225ENST00000533704 IGHV3OR16-13A0A075B7E8 117 aa7.8□□□□□ -1.16
CAPN1-225ENST00000533704 LOC102724200A0A096LPH7 203 aaPredicted RBP7.8□□□□□ -1.16
CAPN1-225ENST00000533704 IGHV3-74A0A0B4J1X5 117 aa7.8□□□□□ -1.16
CAPN1-225ENST00000533704 A0A0G2JRQ6 117 aa7.8□□□□□ -1.16
CAPN1-225ENST00000533704 H3BMQ9 156 aa7.8□□□□□ -1.16
CAPN1-225ENST00000533704 UCP1P25874 307 aa7.8□□□□□ -1.16
CAPN1-225ENST00000533704 TFPI2P48307 235 aa7.8□□□□□ -1.16
CAPN1-225ENST00000533704 SUB1P53999 127 aaKnown RBP eCLIP7.8□□□□□ -1.16
CAPN1-225ENST00000533704 OR51S1Q8NGJ8 323 aa7.8□□□□□ -1.16
CAPN1-225ENST00000533704 ATP6V0BQ99437 205 aa7.8□□□□□ -1.16
CAPN1-225ENST00000533704 SPAG8Q99932 426 aaPredicted RBP7.8□□□□□ -1.16
CAPN1-225ENST00000533704 BCL7BQ9BQE9 202 aa7.8□□□□□ -1.16
CAPN1-225ENST00000533704 GGTLC1Q9BX51 225 aa7.8□□□□□ -1.16
CAPN1-225ENST00000533704 NAA60Q9H7X0 242 aa7.8□□□□□ -1.16
CAPN1-225ENST00000533704 KMT2CQ8NEZ4 4911 aaKnown RBP7.79□□□□□ -1.16
CAPN1-225ENST00000533704 TENM2Q9NT68 2774 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 IGHV7-4-1A0A0J9YVY3 117 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 C15orf62A8K5M9 175 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 K7EMT4 169 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 TSPAN4O14817 238 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 P0C879 139 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 NPBWR1P48145 328 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 TMEM268Q5VZI3 342 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 TMEM116Q8NCL8 245 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 DUSP18Q8NEJ0 188 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 MCFD2Q8NI22 146 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 TXN2Q99757 166 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 PRRT1Q99946 306 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 RTBDNQ9BSG5 229 aaPredicted RBP7.79□□□□□ -1.16
CAPN1-225ENST00000533704 RHPN1-AS1Q9BWJ2 59 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 NXF2Q9GZY0 626 aaKnown RBP7.79□□□□□ -1.16
CAPN1-225ENST00000533704 TMEM222Q9H0R3 208 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 MCUBQ9NWR8 336 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 RABL2AQ9UBK7 228 aaPredicted RBP7.79□□□□□ -1.16
CAPN1-225ENST00000533704 SMPXQ9UHP9 88 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 RABL2BQ9UNT1 228 aa7.79□□□□□ -1.16
CAPN1-225ENST00000533704 TRAV14DV4A0A0A6YYC5 116 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 IGHV3-66A0A0C4DH42 116 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 FABP12A6NFH5 140 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 OR4C46A6NHA9 309 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 CHEK1O14757 476 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 CTDSPLO15194 276 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 B3GALNT1O75752 331 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 NXPH3O95157 252 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 RNASE2P10153 161 aaKnown RBP7.78□□□□□ -1.16
CAPN1-225ENST00000533704 RPL35AP18077 110 aaKnown RBP7.78□□□□□ -1.16
CAPN1-225ENST00000533704 TNFSF8P32971 234 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 OPRK1P41145 380 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 DHODHQ02127 395 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 Q6ZRM9 215 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 SELENOHQ8IZQ5 122 aaKnown RBP7.78□□□□□ -1.16
CAPN1-225ENST00000533704 GBGT1Q8N5D6 347 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 LHFPL5Q8TAF8 219 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 RBPMSQ93062 196 aaKnown RBP7.78□□□□□ -1.16
CAPN1-225ENST00000533704 RNF2Q99496 336 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 GINS3Q9BRX5 216 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 HEYLQ9NQ87 328 aaPredicted RBP7.78□□□□□ -1.16
CAPN1-225ENST00000533704 PRR13Q9NZ81 148 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 CACNG5Q9UF02 275 aa7.78□□□□□ -1.16
CAPN1-225ENST00000533704 RSL24D1Q9UHA3 163 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms