RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 OXA1LQ15070 435 aa12.7□□□□□ -0.38
PACSIN3-210ENST00000533686 TATDN3Q17R31 274 aa12.7□□□□□ -0.38
PACSIN3-210ENST00000533686 C2orf83Q53S99 150 aa12.7□□□□□ -0.38
PACSIN3-210ENST00000533686 NOXA1Q86UR1 476 aa12.7□□□□□ -0.38
PACSIN3-210ENST00000533686 WFDC9Q8NEX5 89 aa12.7□□□□□ -0.38
PACSIN3-210ENST00000533686 DPF1Q92782 380 aa12.7□□□□□ -0.38
PACSIN3-210ENST00000533686 ATP6V0BQ99437 205 aa12.7□□□□□ -0.38
PACSIN3-210ENST00000533686 RANGRFQ9HD47 186 aaPredicted RBP12.7□□□□□ -0.38
PACSIN3-210ENST00000533686 PEF1Q9UBV8 284 aaKnown RBP12.7□□□□□ -0.38
PACSIN3-210ENST00000533686 LINC01619G3V211 115 aa12.69□□□□□ -0.38
PACSIN3-210ENST00000533686 K7EIM0 57 aa12.69□□□□□ -0.38
PACSIN3-210ENST00000533686 CCSO14618 274 aa12.69□□□□□ -0.38
PACSIN3-210ENST00000533686 SYNGR2O43760 224 aa12.69□□□□□ -0.38
PACSIN3-210ENST00000533686 OR8U8P0C7N1 319 aa12.69□□□□□ -0.38
PACSIN3-210ENST00000533686 TREML4Q6UXN2 200 aa12.69□□□□□ -0.38
PACSIN3-210ENST00000533686 GSG1LQ6UXU4 331 aa12.69□□□□□ -0.38
PACSIN3-210ENST00000533686 SLC24A4Q8NFF2 622 aa12.69□□□□□ -0.38
PACSIN3-210ENST00000533686 DUX3Q96PT4 197 aa12.69□□□□□ -0.38
PACSIN3-210ENST00000533686 CIB3Q96Q77 187 aaPredicted RBP12.69□□□□□ -0.38
PACSIN3-210ENST00000533686 CMYA5Q8N3K9 4069 aa12.69□□□□□ -0.38
PACSIN3-210ENST00000533686 WNK1Q9H4A3 2382 aa12.69□□□□□ -0.38
PACSIN3-210ENST00000533686 IGHV4OR15-8A0A075B7B6 117 aa12.68□□□□□ -0.38
PACSIN3-210ENST00000533686 A0A087WW49 117 aa12.68□□□□□ -0.38
PACSIN3-210ENST00000533686 ANKRD34BA5PLL1 514 aa12.68□□□□□ -0.38
PACSIN3-210ENST00000533686 C5orf51A6NDU8 294 aa12.68□□□□□ -0.38
PACSIN3-210ENST00000533686 MFSD2BA6NFX1 497 aa12.68□□□□□ -0.38
PACSIN3-210ENST00000533686 FAM25EA8MYX2 175 aa12.68□□□□□ -0.38
PACSIN3-210ENST00000533686 I3L2K1 104 aa12.68□□□□□ -0.38
PACSIN3-210ENST00000533686 LINC00482Q8N8I6 264 aa12.68□□□□□ -0.38
PACSIN3-210ENST00000533686 ZNF502Q8TBZ5 544 aa12.68□□□□□ -0.38
PACSIN3-210ENST00000533686 MISP3Q96FF7 219 aa12.68□□□□□ -0.38
PACSIN3-210ENST00000533686 C2orf50Q96LR7 162 aa12.68□□□□□ -0.38
PACSIN3-210ENST00000533686 GSKIPQ9P0R6 139 aa12.68□□□□□ -0.38
PACSIN3-210ENST00000533686 MT-CO2P00403 227 aa12.67□□□□□ -0.38
PACSIN3-210ENST00000533686 IFNA10P01566 189 aa12.67□□□□□ -0.38
PACSIN3-210ENST00000533686 ZP3P21754 424 aa12.67□□□□□ -0.38
PACSIN3-210ENST00000533686 NPY1RP25929 384 aa12.67□□□□□ -0.38
PACSIN3-210ENST00000533686 RNASEH2CQ8TDP1 164 aaKnown RBP12.67□□□□□ -0.38
PACSIN3-210ENST00000533686 SCARB1Q8WTV0 552 aa12.67□□□□□ -0.38
PACSIN3-210ENST00000533686 CCDC140Q96MF4 163 aa12.67□□□□□ -0.38
PACSIN3-210ENST00000533686 MAGT1Q9H0U3 335 aa12.67□□□□□ -0.38
PACSIN3-210ENST00000533686 WRBO00258 174 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 SSNA1O43805 119 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 TRBV12-3P01733 135 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 IAPPP10997 89 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 FCGR2BP31994 310 aaPredicted RBP12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 POLR2GP62487 172 aaKnown RBP eCLIP12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 RPP30P78346 268 aaKnown RBP12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 IL15RAQ13261 267 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 C11orf87Q6NUJ2 197 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 CLEC19AQ6UXS0 136 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 TMEM170AQ8WVE7 144 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 TXN2Q99757 166 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 C21orf62Q9NYP8 219 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 ALG5Q9Y673 324 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 S4R3C0 116 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 VWFP04275 2813 aa12.66□□□□□ -0.38
PACSIN3-210ENST00000533686 GOSR2O14653 212 aa12.65□□□□□ -0.38
PACSIN3-210ENST00000533686 IGHV3-23P01764 117 aa12.65□□□□□ -0.38
PACSIN3-210ENST00000533686 MBPP02686 304 aaPredicted RBP12.65□□□□□ -0.38
PACSIN3-210ENST00000533686 CLEC3BP05452 202 aa12.65□□□□□ -0.38
PACSIN3-210ENST00000533686 MFAP4P55083 255 aa12.65□□□□□ -0.38
PACSIN3-210ENST00000533686 PINX1Q96BK5 328 aaKnown RBP12.65□□□□□ -0.38
PACSIN3-210ENST00000533686 SMIM8Q96KF7 97 aa12.65□□□□□ -0.38
PACSIN3-210ENST00000533686 RAB40CQ96S21 281 aa12.65□□□□□ -0.38
PACSIN3-210ENST00000533686 GAR1Q9NY12 217 aaKnown RBP12.65□□□□□ -0.38
PACSIN3-210ENST00000533686 IGHV3-21A0A0B4J1V1 117 aa12.64□□□□□ -0.39
PACSIN3-210ENST00000533686 RPS10-NUDT3A0A1W2PQS6 291 aa12.64□□□□□ -0.39
PACSIN3-210ENST00000533686 BMPR1BO00238 502 aa12.64□□□□□ -0.39
PACSIN3-210ENST00000533686 GGCTO75223 188 aaKnown RBP12.64□□□□□ -0.39
PACSIN3-210ENST00000533686 SCGB1D2O95969 90 aa12.64□□□□□ -0.39
PACSIN3-210ENST00000533686 CD33P20138 364 aa12.64□□□□□ -0.39
PACSIN3-210ENST00000533686 HOXD3P31249 432 aaPredicted RBP12.64□□□□□ -0.39
PACSIN3-210ENST00000533686 TAS2R30P59541 319 aa12.64□□□□□ -0.39
PACSIN3-210ENST00000533686 CYCSP99999 105 aaKnown RBP12.64□□□□□ -0.39
PACSIN3-210ENST00000533686 FNDC4Q9H6D8 234 aaPredicted RBP12.64□□□□□ -0.39
PACSIN3-210ENST00000533686 C15orf62A8K5M9 175 aa12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 F8W735 103 aaPredicted RBP12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 SSSCA1O60232 199 aa12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 GPR183P32249 361 aa12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 ARL3P36405 182 aa12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 OPRK1P41145 380 aa12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 SLURP1P55000 103 aa12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 RAB11AP62491 216 aa12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 KLF5Q13887 457 aaPredicted RBP12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 RPEL1Q2QD12 228 aa12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 ETFRF1Q6IPR1 90 aa12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 SPSB3Q6PJ21 355 aa12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 DCUN1D4Q92564 292 aa12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 DLX4Q92988 240 aaPredicted RBP12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 BSCL2Q96G97 398 aaPredicted RBP12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 RCC1LQ96I51 464 aaKnown RBP12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 NMES1Q9C002 83 aa12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 RCL1Q9Y2P8 373 aaKnown RBP12.63□□□□□ -0.39
PACSIN3-210ENST00000533686 PPP5D1E7EU14 171 aa12.62□□□□□ -0.39
PACSIN3-210ENST00000533686 K7EPK0 472 aa12.62□□□□□ -0.39
PACSIN3-210ENST00000533686 TGOLN2O43493 480 aa12.62□□□□□ -0.39
PACSIN3-210ENST00000533686 SIX6O95475 246 aa12.62□□□□□ -0.39
PACSIN3-210ENST00000533686 TMEM50AO95807 157 aa12.62□□□□□ -0.39
PACSIN3-210ENST00000533686 IFNA4P05014 189 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms