RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 ANXA10Q9UJ72 324 aa5.53□□□□□ -1.52
NXF1-215ENST00000533440 NBDYA0A0U1RRE5 68 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 TMEM189A5PLL7 270 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 GNAO1P09471 354 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 ZNF688P0C7X2 276 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 RPS25P62851 125 aaKnown RBP5.52□□□□□ -1.53
NXF1-215ENST00000533440 CATR1Q13166 79 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 OXA1LQ15070 435 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 RCN1Q15293 331 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 TRAM1Q15629 374 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 ZNF705AQ6ZN79 300 aaPredicted RBP5.52□□□□□ -1.53
NXF1-215ENST00000533440 C10orf67Q8IYJ2 551 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 DHRSXQ8N5I4 330 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 SLC25A46Q96AG3 418 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 HINT2Q9BX68 163 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 C1QTNF4Q9BXJ3 329 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 TMEM231Q9H6L2 316 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 DKK2Q9UBU2 259 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 OR51B2Q9Y5P1 312 aa5.52□□□□□ -1.53
NXF1-215ENST00000533440 PUS1Q9Y606 427 aaKnown RBP eCLIP5.52□□□□□ -1.53
NXF1-215ENST00000533440 HMCN2Q8NDA2 5059 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 TEX48A0A1B0GUV7 120 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 A0A1W2PS18 150 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 IFITM5A6NNB3 132 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 MARCH11A6NNE9 402 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 ZNF705FA8MVS1 300 aaPredicted RBP5.51□□□□□ -1.53
NXF1-215ENST00000533440 EREGO14944 169 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 SSX5O60225 188 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 GNG7O60262 68 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 MT-CO2P00403 227 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 PPYP01298 95 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 ZNF705DP0CH99 300 aaPredicted RBP5.51□□□□□ -1.53
NXF1-215ENST00000533440 ZNF705BP0CI00 300 aaPredicted RBP5.51□□□□□ -1.53
NXF1-215ENST00000533440 PSMA1P25786 263 aaKnown RBP5.51□□□□□ -1.53
NXF1-215ENST00000533440 FGF9P31371 208 aaPredicted RBP5.51□□□□□ -1.53
NXF1-215ENST00000533440 FCGR2CP31995 323 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 OR10A3P58181 314 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 NUTF2P61970 127 aaKnown RBP5.51□□□□□ -1.53
NXF1-215ENST00000533440 FABP5Q01469 135 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 TMEM88Q6PEY1 159 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 ZNF600Q6ZNG1 722 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 C8orf59Q8N0T1 100 aaPredicted RBP5.51□□□□□ -1.53
NXF1-215ENST00000533440 ZNF114Q8NC26 417 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 STXBP6Q8NFX7 210 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 OR13F1Q8NGS4 319 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 ZNRF2Q8NHG8 242 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 NUDCD2Q8WVJ2 157 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 TMEM56Q96MV1 263 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 RAB40CQ96S21 281 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 NIPSNAP3BQ9BS92 247 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 YTHDF1Q9BYJ9 559 aaKnown RBP5.51□□□□□ -1.53
NXF1-215ENST00000533440 ATG5Q9H1Y0 275 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 XCL2Q9UBD3 114 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 NSG2Q9Y328 171 aa5.51□□□□□ -1.53
NXF1-215ENST00000533440 A0A1B0GU03 582 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 TMEM235A6NFC5 223 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 SMIM9A6NGZ8 99 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 DBX1A6NMT0 343 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 IGHV3-48P01763 117 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 NPPCP23582 126 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 CRYBB3P26998 211 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 ERVK-16P61578 105 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 KCTD21Q4G0X4 260 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 FAM222AQ5U5X8 452 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 ZNF818PQ6ZRF7 136 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 C15orf53Q8NAA6 179 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 OR51H1Q8NH63 302 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 MISP3Q96FF7 219 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 SLC5A7Q9GZV3 580 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 PRNDQ9UKY0 176 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 TMED3Q9Y3Q3 217 aa5.5□□□□□ -1.53
NXF1-215ENST00000533440 SRRM2Q9UQ35 2752 aaKnown RBP5.5□□□□□ -1.53
NXF1-215ENST00000533440 DNAH8Q96JB1 4490 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 TRAV1-2A0A0B4J238 106 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 H3BMM0 161 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 PDCD5O14737 125 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 SNAPC5O75971 98 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 TMEM50AO95807 157 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 PTHLHP12272 177 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 F2RP25116 425 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 P2RY1P47900 373 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 NPBWR1P48145 328 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 EMP1P54849 157 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 GNG2P59768 71 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 ARPC4P59998 168 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 PSMG4Q5JS54 123 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 AADACL3Q5VUY0 350 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 PACRGLQ8N7B6 248 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 ACOT13Q9NPJ3 140 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 C8orf4Q9NR00 106 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 FKBP11Q9NYL4 201 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 RFNGQ9Y644 331 aa5.49□□□□□ -1.53
NXF1-215ENST00000533440 FLG2Q5D862 2391 aaPredicted RBP5.49□□□□□ -1.53
NXF1-215ENST00000533440 HELTA6NFD8 242 aa5.48□□□□□ -1.53
NXF1-215ENST00000533440 PTGES3LE9PB15 166 aa5.48□□□□□ -1.53
NXF1-215ENST00000533440 EIF4EBP3O60516 100 aaPredicted RBP5.48□□□□□ -1.53
NXF1-215ENST00000533440 KRASP01116 189 aa5.48□□□□□ -1.53
NXF1-215ENST00000533440 HSMCR30P0CW71 290 aa5.48□□□□□ -1.53
NXF1-215ENST00000533440 HTN3P15516 51 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms