RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 ECSCRQ19T08 205 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 LGALSLQ3ZCW2 172 aaPredicted RBP11.04□□□□□ -0.64
HIF3A-215ENST00000533145 ETV3LQ6ZN32 361 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 STX12Q86Y82 276 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 OR5T1Q8NG75 326 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 OR10P1Q8NGE3 313 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 OR2T6Q8NHC8 308 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 NOL4LQ96MY1 436 aaPredicted RBP11.04□□□□□ -0.64
HIF3A-215ENST00000533145 DMRT1Q9Y5R6 373 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 SOX15O60248 233 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 IGLV1-40P01703 118 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 DEFA4P12838 97 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 CXCL2P19875 107 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 S100A11P31949 105 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 GPX4P36969 197 aaPredicted RBP11.03□□□□□ -0.64
HIF3A-215ENST00000533145 EIF2B2P49770 351 aaKnown RBP11.03□□□□□ -0.64
HIF3A-215ENST00000533145 NHLH2Q02577 135 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 ARL16Q0P5N6 197 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 EXOSC2Q13868 293 aaKnown RBP11.03□□□□□ -0.64
HIF3A-215ENST00000533145 ATP6V1FQ16864 119 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 SLC25A24Q6NUK1 477 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 HAPLN4Q86UW8 402 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 KCNRGQ8N5I3 272 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 CACNG8Q8WXS5 425 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 GGACTQ9BVM4 153 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 LINC00527Q9UJ94 153 aa11.03□□□□□ -0.64
HIF3A-215ENST00000533145 FNDC10F2Z333 226 aa11.02□□□□□ -0.65
HIF3A-215ENST00000533145 CST7O76096 145 aa11.02□□□□□ -0.65
HIF3A-215ENST00000533145 IGHG4P01861 327 aa11.02□□□□□ -0.65
HIF3A-215ENST00000533145 IFNA4P05014 189 aa11.02□□□□□ -0.65
HIF3A-215ENST00000533145 HNRNPCP07910 306 aaKnown RBP eCLIP11.02□□□□□ -0.65
HIF3A-215ENST00000533145 HBG1P69891 147 aa11.02□□□□□ -0.65
HIF3A-215ENST00000533145 HBG2P69892 147 aa11.02□□□□□ -0.65
HIF3A-215ENST00000533145 TMEM95Q3KNT9 176 aa11.02□□□□□ -0.65
HIF3A-215ENST00000533145 ARSJQ5FYB0 599 aaPredicted RBP11.02□□□□□ -0.65
HIF3A-215ENST00000533145 LAMTOR1Q6IAA8 161 aa11.02□□□□□ -0.65
HIF3A-215ENST00000533145 LINC01006Q8NI28 216 aa11.02□□□□□ -0.65
HIF3A-215ENST00000533145 PINX1Q96BK5 328 aaKnown RBP11.02□□□□□ -0.65
HIF3A-215ENST00000533145 THYN1Q9P016 225 aa11.02□□□□□ -0.65
HIF3A-215ENST00000533145 BOLA2-SMG1P6H3BVE0 249 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 TAAR5O14804 337 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 SLC35B1P78383 322 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 DLK1P80370 383 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 CD69Q07108 199 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 OR8G2PQ6IF36 304 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 ETFRF1Q6IPR1 90 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 C19orf35Q6ZS72 473 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 C9orf62Q8N4C0 152 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 COMMD1Q8N668 190 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 OR1S2Q8NGQ3 325 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 WIPF2Q8TF74 440 aaPredicted RBP11.01□□□□□ -0.65
HIF3A-215ENST00000533145 BSCL2Q96G97 398 aaPredicted RBP11.01□□□□□ -0.65
HIF3A-215ENST00000533145 SLA2Q9H6Q3 261 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 ZC4H2Q9NQZ6 224 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 PAIP2BQ9ULR5 123 aaKnown RBP11.01□□□□□ -0.65
HIF3A-215ENST00000533145 CUBNO60494 3623 aa11.01□□□□□ -0.65
HIF3A-215ENST00000533145 RPS10-NUDT3A0A1W2PQS6 291 aa11□□□□□ -0.65
HIF3A-215ENST00000533145 I3L2K1 104 aa11□□□□□ -0.65
HIF3A-215ENST00000533145 ELANEP08246 267 aa11□□□□□ -0.65
HIF3A-215ENST00000533145 PSMB8P28062 276 aa11□□□□□ -0.65
HIF3A-215ENST00000533145 SLC38A11Q08AI6 406 aa11□□□□□ -0.65
HIF3A-215ENST00000533145 VWC2Q2TAL6 325 aa11□□□□□ -0.65
HIF3A-215ENST00000533145 TEX38Q6PEX7 206 aa11□□□□□ -0.65
HIF3A-215ENST00000533145 RNF152Q8N8N0 203 aa11□□□□□ -0.65
HIF3A-215ENST00000533145 NECAP1Q8NC96 275 aa11□□□□□ -0.65
HIF3A-215ENST00000533145 OR5C1Q8NGR4 320 aa11□□□□□ -0.65
HIF3A-215ENST00000533145 OR4F5Q8NH21 305 aa11□□□□□ -0.65
HIF3A-215ENST00000533145 FNDC4Q9H6D8 234 aaPredicted RBP11□□□□□ -0.65
HIF3A-215ENST00000533145 PSMB11A5LHX3 300 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 FAM223BA6NKX1 122 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 K7EIM0 57 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 DFFBO76075 338 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 PRH1P02810 166 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 NKX2-5P52952 324 aaPredicted RBP10.99□□□□□ -0.65
HIF3A-215ENST00000533145 AP2S1P53680 142 aaPredicted RBP10.99□□□□□ -0.65
HIF3A-215ENST00000533145 FOXE3Q13461 319 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 TMUB2Q71RG4 321 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 CENPVQ7Z7K6 275 aaPredicted RBP10.99□□□□□ -0.65
HIF3A-215ENST00000533145 FAM223AQ8IWN6 122 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 TMEM217Q8N7C4 229 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 VN1R17PQ8TDU5 208 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 MISP3Q96FF7 219 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 USMG5Q96IX5 58 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 ATP6V0BQ99437 205 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 FBXL7Q9UJT9 491 aa10.99□□□□□ -0.65
HIF3A-215ENST00000533145 A0A1B0GUS0 222 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 OR2J3O76001 311 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 NDUFB8O95169 186 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 MT-CO2P00403 227 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 C4BPBP20851 252 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 MDKP21741 143 aaPredicted RBP10.98□□□□□ -0.65
HIF3A-215ENST00000533145 FCGR2BP31994 310 aaPredicted RBP10.98□□□□□ -0.65
HIF3A-215ENST00000533145 OPRK1P41145 380 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 RAB9AP51151 201 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 RHOGP84095 191 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 MLANAQ16655 118 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 ZNF329Q86UD4 541 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 TMEM116Q8NCL8 245 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 MYOZ3Q8TDC0 251 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 TAF15Q92804 592 aaKnown RBP eCLIP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms